Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm25161-201ENSMUST00000158913 132 ntBASIC0.61□□□□□ -2.31
Prom1O54990 Gm27943-201ENSMUST00000184844 116 ntBASIC0.61□□□□□ -2.31
Prom1O54990 Gm24208-201ENSMUST00000082783 135 ntBASIC0.61□□□□□ -2.31
Prom1O54990 Mir29a-201ENSMUST00000083676 88 ntBASIC0.61□□□□□ -2.31
Prom1O54990 Gm23672-201ENSMUST00000157471 107 ntBASIC0.6□□□□□ -2.31
Prom1O54990 Gm43927-201ENSMUST00000204599 117 ntBASIC0.6□□□□□ -2.31
Prom1O54990 Mir200a-201ENSMUST00000083466 90 ntBASIC0.6□□□□□ -2.31
Prom1O54990 Gm25879-201ENSMUST00000104330 107 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Gm26253-201ENSMUST00000122493 103 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Gm26478-201ENSMUST00000122611 133 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Gm26712-201ENSMUST00000180813 217 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Gm43432-201ENSMUST00000196352 121 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Gm24445-201ENSMUST00000083981 107 ntBASIC0.59□□□□□ -2.31
Prom1O54990 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Prom1O54990 Gm25247-201ENSMUST00000175475 90 ntBASIC0.58□□□□□ -2.32
Prom1O54990 Mir7229-201ENSMUST00000197062 53 ntBASIC0.58□□□□□ -2.32
Prom1O54990 Gm43907-201ENSMUST00000203128 117 ntBASIC0.58□□□□□ -2.32
Prom1O54990 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.58□□□□□ -2.32
Prom1O54990 Mir216a-201ENSMUST00000083605 72 ntBASIC0.58□□□□□ -2.32
Prom1O54990 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.57□□□□□ -2.32
Prom1O54990 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.56□□□□□ -2.32
Prom1O54990 Gm26484-201ENSMUST00000158018 106 ntBASIC0.56□□□□□ -2.32
Prom1O54990 Gm22522-201ENSMUST00000158271 151 ntBASIC0.56□□□□□ -2.32
Prom1O54990 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.56□□□□□ -2.32
Prom1O54990 Gm23708-201ENSMUST00000104367 123 ntBASIC0.55□□□□□ -2.32
Prom1O54990 Gm23291-201ENSMUST00000175611 78 ntBASIC0.55□□□□□ -2.32
Prom1O54990 Gm44457-201ENSMUST00000198109 76 ntBASIC0.55□□□□□ -2.32
Prom1O54990 Gm22302-201ENSMUST00000082657 106 ntBASIC0.55□□□□□ -2.32
Prom1O54990 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC0.54□□□□□ -2.32
Prom1O54990 Gm22340-201ENSMUST00000157717 114 ntBASIC0.54□□□□□ -2.32
Prom1O54990 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.54□□□□□ -2.32
Prom1O54990 Gm22770-201ENSMUST00000158368 67 ntBASIC0.53□□□□□ -2.32
Prom1O54990 Gm25366-201ENSMUST00000158845 124 ntBASIC0.53□□□□□ -2.32
Prom1O54990 Mir509-201ENSMUST00000196089 75 ntBASIC0.53□□□□□ -2.32
Prom1O54990 Gm3702-201ENSMUST00000211754 346 ntBASIC0.53□□□□□ -2.32
Prom1O54990 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.53□□□□□ -2.32
Prom1O54990 Gm24099-201ENSMUST00000083384 107 ntBASIC0.53□□□□□ -2.32
Prom1O54990 Gm24555-201ENSMUST00000104548 124 ntBASIC0.52□□□□□ -2.33
Prom1O54990 Gm24772-201ENSMUST00000158507 110 ntBASIC0.52□□□□□ -2.33
Prom1O54990 Mir3105-201ENSMUST00000175480 85 ntBASIC0.52□□□□□ -2.33
Prom1O54990 Mir6389-201ENSMUST00000183661 102 ntBASIC0.52□□□□□ -2.33
Prom1O54990 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.52□□□□□ -2.33
Prom1O54990 Mir1197-201ENSMUST00000117037 120 ntBASIC0.51□□□□□ -2.33
Prom1O54990 Snord2-201ENSMUST00000157899 69 ntBASIC0.51□□□□□ -2.33
Prom1O54990 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.51□□□□□ -2.33
Prom1O54990 Gm23969-201ENSMUST00000083324 74 ntBASIC0.51□□□□□ -2.33
Prom1O54990 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Gm24278-201ENSMUST00000104239 127 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Gm23261-201ENSMUST00000158316 136 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Gm24801-201ENSMUST00000178503 105 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Mir6896-201ENSMUST00000198033 73 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Gm45541-201ENSMUST00000210443 54 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Gm22303-201ENSMUST00000082686 122 ntBASIC0.5□□□□□ -2.33
Prom1O54990 Gm23012-201ENSMUST00000104149 83 ntBASIC0.49□□□□□ -2.33
Prom1O54990 Gm22672-201ENSMUST00000104414 134 ntBASIC0.49□□□□□ -2.33
Prom1O54990 Gm22100-201ENSMUST00000157926 63 ntBASIC0.49□□□□□ -2.33
Prom1O54990 Gm44828-201ENSMUST00000203745 106 ntBASIC0.48□□□□□ -2.33
Prom1O54990 Gm27607-201ENSMUST00000185162 122 ntBASIC0.47□□□□□ -2.33
Prom1O54990 Gm44327-201ENSMUST00000200068 117 ntBASIC0.47□□□□□ -2.33
Prom1O54990 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Prom1O54990 Gm24697-201ENSMUST00000083881 107 ntBASIC0.47□□□□□ -2.33
Prom1O54990 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Prom1O54990 Gm22140-201ENSMUST00000158745 120 ntBASIC0.46□□□□□ -2.34
Prom1O54990 Gm22239-201ENSMUST00000175220 103 ntBASIC0.46□□□□□ -2.34
Prom1O54990 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.46□□□□□ -2.34
Prom1O54990 Gm42845-201ENSMUST00000197766 105 ntBASIC0.46□□□□□ -2.34
Prom1O54990 Gm24202-201ENSMUST00000082948 103 ntBASIC0.46□□□□□ -2.34
Prom1O54990 Snora2b-201ENSMUST00000084005 137 ntBASIC0.46□□□□□ -2.34
Prom1O54990 Gm23197-201ENSMUST00000158809 112 ntBASIC0.45□□□□□ -2.34
Prom1O54990 Gm27686-201ENSMUST00000185123 91 ntBASIC0.45□□□□□ -2.34
Prom1O54990 Gm23244-201ENSMUST00000083375 92 ntBASIC0.45□□□□□ -2.34
Prom1O54990 Gm24963-201ENSMUST00000157916 144 ntBASIC0.44□□□□□ -2.34
Prom1O54990 Mir3083-201ENSMUST00000175377 64 ntBASIC0.44□□□□□ -2.34
Prom1O54990 Mir224-201ENSMUST00000083608 82 ntBASIC0.44□□□□□ -2.34
Prom1O54990 Gm24384-201ENSMUST00000122693 75 ntBASIC0.43□□□□□ -2.34
Prom1O54990 Gm25289-201ENSMUST00000122799 119 ntBASIC0.43□□□□□ -2.34
Prom1O54990 Gm25449-201ENSMUST00000179389 79 ntBASIC0.43□□□□□ -2.34
Prom1O54990 Gm27980-201ENSMUST00000184094 169 ntBASIC0.43□□□□□ -2.34
Prom1O54990 Mir450b-201ENSMUST00000102095 82 ntBASIC0.42□□□□□ -2.34
Prom1O54990 Gm22983-201ENSMUST00000158308 104 ntBASIC0.42□□□□□ -2.34
Prom1O54990 Gm22406-201ENSMUST00000174923 93 ntBASIC0.42□□□□□ -2.34
Prom1O54990 Mir5619-201ENSMUST00000176065 61 ntBASIC0.42□□□□□ -2.34
Prom1O54990 Snord95-201ENSMUST00000082846 68 ntBASIC0.42□□□□□ -2.34
Prom1O54990 Gm29047-201ENSMUST00000189816 108 ntBASIC0.41□□□□□ -2.34
Prom1O54990 Gm23790-201ENSMUST00000083013 107 ntBASIC0.41□□□□□ -2.34
Prom1O54990 Gm25408-201ENSMUST00000104104 133 ntBASIC0.4□□□□□ -2.35
Prom1O54990 Gm24983-201ENSMUST00000104457 69 ntBASIC0.4□□□□□ -2.35
Prom1O54990 Gm22845-201ENSMUST00000157712 104 ntBASIC0.4□□□□□ -2.35
Prom1O54990 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.4□□□□□ -2.35
Prom1O54990 Gm26303-201ENSMUST00000116845 119 ntBASIC0.39□□□□□ -2.35
Prom1O54990 Gm24650-201ENSMUST00000157105 103 ntBASIC0.39□□□□□ -2.35
Prom1O54990 Gm25375-201ENSMUST00000158157 135 ntBASIC0.39□□□□□ -2.35
Prom1O54990 Gm26466-201ENSMUST00000179615 79 ntBASIC0.39□□□□□ -2.35
Prom1O54990 Mir7077-201ENSMUST00000183991 57 ntBASIC0.39□□□□□ -2.35
Prom1O54990 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.39□□□□□ -2.35
Prom1O54990 Mir5117-201ENSMUST00000083226 84 ntBASIC0.39□□□□□ -2.35
Prom1O54990 Gm22759-201ENSMUST00000102276 96 ntBASIC0.38□□□□□ -2.35
Prom1O54990 Gm22203-201ENSMUST00000158605 58 ntBASIC0.38□□□□□ -2.35
Prom1O54990 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 213 ms