Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm6985-201ENSMUST00000121255 271 ntBASIC1.12□□□□□ -2.23
Pcdh1F7BJK1 Mir8119-201ENSMUST00000183371 129 ntBASIC1.12□□□□□ -2.23
Pcdh1F7BJK1 Gm22980-201ENSMUST00000082608 70 ntBASIC1.12□□□□□ -2.23
Pcdh1F7BJK1 Gm22100-201ENSMUST00000157926 63 ntBASIC1.11□□□□□ -2.23
Pcdh1F7BJK1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.11□□□□□ -2.23
Pcdh1F7BJK1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.11□□□□□ -2.23
Pcdh1F7BJK1 Mir1949-202ENSMUST00000199259 70 ntBASIC1.11□□□□□ -2.23
Pcdh1F7BJK1 Mir1904-201ENSMUST00000122702 80 ntBASIC1.1□□□□□ -2.23
Pcdh1F7BJK1 Gm25964-201ENSMUST00000157171 97 ntBASIC1.1□□□□□ -2.23
Pcdh1F7BJK1 Snord2-201ENSMUST00000157899 69 ntBASIC1.1□□□□□ -2.23
Pcdh1F7BJK1 Gm22203-201ENSMUST00000158605 58 ntBASIC1.1□□□□□ -2.23
Pcdh1F7BJK1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
Pcdh1F7BJK1 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.09□□□□□ -2.23
Pcdh1F7BJK1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.09□□□□□ -2.23
Pcdh1F7BJK1 Gm22673-201ENSMUST00000104415 131 ntBASIC1.09□□□□□ -2.23
Pcdh1F7BJK1 Gm22540-201ENSMUST00000158168 117 ntBASIC1.09□□□□□ -2.23
Pcdh1F7BJK1 Gm22406-201ENSMUST00000174923 93 ntBASIC1.09□□□□□ -2.23
Pcdh1F7BJK1 Gm23570-201ENSMUST00000083029 104 ntBASIC1.09□□□□□ -2.23
Pcdh1F7BJK1 Gm25991-201ENSMUST00000102439 99 ntBASIC1.08□□□□□ -2.24
Pcdh1F7BJK1 Gm13065-201ENSMUST00000119178 141 ntBASIC1.08□□□□□ -2.24
Pcdh1F7BJK1 Gm24221-201ENSMUST00000158833 313 ntBASIC1.08□□□□□ -2.24
Pcdh1F7BJK1 Gm26499-201ENSMUST00000178544 79 ntBASIC1.08□□□□□ -2.24
Pcdh1F7BJK1 Gm26096-201ENSMUST00000179084 79 ntBASIC1.08□□□□□ -2.24
Pcdh1F7BJK1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm11333-201ENSMUST00000119479 148 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm25619-201ENSMUST00000122621 104 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm26359-201ENSMUST00000158873 101 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm25160-201ENSMUST00000158914 102 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Mir15a-201ENSMUST00000175266 84 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm23416-201ENSMUST00000175520 95 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm24495-201ENSMUST00000178575 79 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm22253-201ENSMUST00000179870 79 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm44211-201ENSMUST00000204867 145 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm22652-201ENSMUST00000083207 131 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm25138-201ENSMUST00000083248 136 ntBASIC1.07□□□□□ -2.24
Pcdh1F7BJK1 Gm25609-201ENSMUST00000104019 104 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Gm22520-201ENSMUST00000158269 129 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Gm27974-201ENSMUST00000183415 105 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Gm27717-201ENSMUST00000183933 151 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.06□□□□□ -2.24
Pcdh1F7BJK1 Mir343-201ENSMUST00000102360 75 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm23708-201ENSMUST00000104367 123 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm22067-201ENSMUST00000122790 107 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm23410-201ENSMUST00000179967 107 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm22505-201ENSMUST00000082956 108 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm22363-201ENSMUST00000083100 108 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm23814-201ENSMUST00000083230 102 ntBASIC1.05□□□□□ -2.24
Pcdh1F7BJK1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.04□□□□□ -2.24
Pcdh1F7BJK1 Gm24233-201ENSMUST00000104317 122 ntBASIC1.04□□□□□ -2.24
Pcdh1F7BJK1 Gm12432-201ENSMUST00000119540 186 ntBASIC1.04□□□□□ -2.24
Pcdh1F7BJK1 Gm25300-201ENSMUST00000175284 84 ntBASIC1.04□□□□□ -2.24
Pcdh1F7BJK1 Gm23376-201ENSMUST00000082938 160 ntBASIC1.04□□□□□ -2.24
Pcdh1F7BJK1 Gm23500-201ENSMUST00000157735 98 ntBASIC1.03□□□□□ -2.24
Pcdh1F7BJK1 Mir3098-201ENSMUST00000175416 87 ntBASIC1.03□□□□□ -2.24
Pcdh1F7BJK1 Mir7091-201ENSMUST00000184075 79 ntBASIC1.03□□□□□ -2.24
Pcdh1F7BJK1 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.03□□□□□ -2.24
Pcdh1F7BJK1 Gm25170-201ENSMUST00000104191 129 ntBASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 Gm25274-201ENSMUST00000104296 135 ntBASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 Gm22413-201ENSMUST00000175465 85 ntBASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 Mir7010-201ENSMUST00000183464 63 ntBASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 Mir448-201ENSMUST00000083516 112 ntBASIC1.02□□□□□ -2.25
Pcdh1F7BJK1 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.01□□□□□ -2.25
Pcdh1F7BJK1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.01□□□□□ -2.25
Pcdh1F7BJK1 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Pcdh1F7BJK1 Gm23012-201ENSMUST00000104149 83 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 Gm26301-201ENSMUST00000104813 95 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 n-R5s6-201ENSMUST00000122663 88 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 Gm23328-201ENSMUST00000157418 132 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 Gm25166-201ENSMUST00000158909 111 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 Gm23306-201ENSMUST00000179058 105 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 Mir126a-201ENSMUST00000083606 73 ntBASIC1□□□□□ -2.25
Pcdh1F7BJK1 Gm24777-201ENSMUST00000157644 107 ntBASIC0.99□□□□□ -2.25
Pcdh1F7BJK1 Gm25328-201ENSMUST00000175013 107 ntBASIC0.99□□□□□ -2.25
Pcdh1F7BJK1 Gm6293-201ENSMUST00000050339 195 ntBASIC0.99□□□□□ -2.25
Pcdh1F7BJK1 Mir33-201ENSMUST00000083531 69 ntBASIC0.99□□□□□ -2.25
Pcdh1F7BJK1 Gm24580-201ENSMUST00000103965 131 ntBASIC0.98□□□□□ -2.25
Pcdh1F7BJK1 Gm25756-201ENSMUST00000103990 136 ntBASIC0.98□□□□□ -2.25
Pcdh1F7BJK1 Gm22780-201ENSMUST00000104084 132 ntBASIC0.98□□□□□ -2.25
Pcdh1F7BJK1 Gm27656-201ENSMUST00000185055 80 ntBASIC0.98□□□□□ -2.25
Pcdh1F7BJK1 Gm24624-201ENSMUST00000082617 164 ntBASIC0.98□□□□□ -2.25
Pcdh1F7BJK1 Gm24134-201ENSMUST00000083361 71 ntBASIC0.98□□□□□ -2.25
Pcdh1F7BJK1 Snord71-201ENSMUST00000104361 85 ntBASIC0.97□□□□□ -2.25
Pcdh1F7BJK1 Mir1954-201ENSMUST00000175595 86 ntBASIC0.97□□□□□ -2.25
Pcdh1F7BJK1 Mir6381-201ENSMUST00000183426 87 ntBASIC0.97□□□□□ -2.25
Pcdh1F7BJK1 Mir101a-201ENSMUST00000083517 83 ntBASIC0.97□□□□□ -2.25
Pcdh1F7BJK1 Mir200b-201ENSMUST00000083615 70 ntBASIC0.97□□□□□ -2.25
Pcdh1F7BJK1 Gm23203-201ENSMUST00000104374 107 ntBASIC0.96□□□□□ -2.26
Pcdh1F7BJK1 Gm23237-201ENSMUST00000104639 92 ntBASIC0.96□□□□□ -2.26
Pcdh1F7BJK1 Mir6380-201ENSMUST00000184334 81 ntBASIC0.96□□□□□ -2.26
Pcdh1F7BJK1 Gm20305-201ENSMUST00000193226 177 ntBASIC0.96□□□□□ -2.26
Pcdh1F7BJK1 Gm44490-201ENSMUST00000198566 127 ntBASIC0.96□□□□□ -2.26
Pcdh1F7BJK1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.96□□□□□ -2.26
Pcdh1F7BJK1 Snord32a-201ENSMUST00000083285 83 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 227.7 ms