Protein–RNA interactions for Protein: A0A0B4J1H2
Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mouse
Protein |
RNA |
Prediction (catRAPID) |
Interaction (Experimental data) |
Gene |
UniProt Accession |
Transcript Symbol |
Ensembl Transcript ID |
Length |
Transcript Status |
Prediction Score |
Prediction z-Score |
p-Value |
Fold Change |
Trbv13-3 | A0A0B4J1H2 | Gm25522-201 | ENSMUST00000158394 | 105 nt | BASIC | -0,42 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | AC157602.1-201 | ENSMUST00000197446 | 105 nt | BASIC | -0,42 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Traj38-201 | ENSMUST00000103704 | 62 nt | APPRIS P1 BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Snord64-201 | ENSMUST00000104003 | 67 nt | BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23483-201 | ENSMUST00000104179 | 108 nt | BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm22319-201 | ENSMUST00000157147 | 122 nt | BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm17528-201 | ENSMUST00000171026 | 239 nt | BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm43324-201 | ENSMUST00000197482 | 289 nt | BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | mt-Atp8-201 | ENSMUST00000082407 | 204 nt | APPRIS P1 BASIC | -0,43 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Mir467g-201 | ENSMUST00000116906 | 120 nt | BASIC | -0,44 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm44470-201 | ENSMUST00000203913 | 142 nt | BASIC | -0,44 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25081-201 | ENSMUST00000082534 | 108 nt | BASIC | -0,44 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23314-201 | ENSMUST00000157218 | 107 nt | BASIC | -0,45 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24947-201 | ENSMUST00000158334 | 110 nt | BASIC | -0,45 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25249-201 | ENSMUST00000175471 | 78 nt | BASIC | -0,45 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm45429-201 | ENSMUST00000209527 | 172 nt | BASIC | -0,45 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Mirlet7a-1-201 | ENSMUST00000083487 | 94 nt | BASIC | -0,45 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25186-201 | ENSMUST00000083909 | 108 nt | BASIC | -0,45 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26421-201 | ENSMUST00000104279 | 132 nt | BASIC | -0,46 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24887-201 | ENSMUST00000104386 | 108 nt | BASIC | -0,46 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm22558-201 | ENSMUST00000157326 | 95 nt | BASIC | -0,46 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm43977-201 | ENSMUST00000203970 | 189 nt | BASIC | -0,46 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25802-201 | ENSMUST00000082639 | 77 nt | BASIC | -0,46 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23056-201 | ENSMUST00000082803 | 111 nt | BASIC | -0,46 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Mir487b-201 | ENSMUST00000102265 | 82 nt | BASIC | -0,47 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Snora26-201 | ENSMUST00000175614 | 121 nt | BASIC | -0,47 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm44322-201 | ENSMUST00000196830 | 115 nt | BASIC | -0,47 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25401-201 | ENSMUST00000082975 | 106 nt | BASIC | -0,47 | □□□□□ -2,48 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25275-201 | ENSMUST00000104297 | 129 nt | BASIC | -0,48 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26337-201 | ENSMUST00000178000 | 79 nt | BASIC | -0,48 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24508-201 | ENSMUST00000180104 | 107 nt | BASIC | -0,48 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm38298-201 | ENSMUST00000193578 | 118 nt | BASIC | -0,48 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm11116-201 | ENSMUST00000113257 | 54 nt | APPRIS P1 TSL 5 BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24587-201 | ENSMUST00000116697 | 89 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm12086-201 | ENSMUST00000120863 | 228 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24877-201 | ENSMUST00000158779 | 116 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Mir7116-201 | ENSMUST00000195956 | 70 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | AC129019.2-201 | ENSMUST00000222063 | 202 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | mt-Tn-201 | ENSMUST00000082399 | 71 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Mir141-201 | ENSMUST00000083540 | 72 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24697-201 | ENSMUST00000083881 | 107 nt | BASIC | -0,49 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25889-201 | ENSMUST00000157775 | 107 nt | BASIC | -0,5 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Snora16a-202 | ENSMUST00000196061 | 137 nt | BASIC | -0,5 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm6607-201 | ENSMUST00000215035 | 328 nt | BASIC | -0,5 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24455-201 | ENSMUST00000083348 | 131 nt | BASIC | -0,5 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23500-201 | ENSMUST00000157735 | 98 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm22607-201 | ENSMUST00000158291 | 105 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23922-201 | ENSMUST00000178792 | 79 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24657-201 | ENSMUST00000180085 | 79 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm22996-201 | ENSMUST00000180236 | 79 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Mir6237-201 | ENSMUST00000183808 | 91 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | AC165138.1-201 | ENSMUST00000226984 | 270 nt | BASIC | -0,51 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Traj43-201 | ENSMUST00000103699 | 57 nt | APPRIS P1 BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24468-201 | ENSMUST00000104489 | 104 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23651-201 | ENSMUST00000116755 | 120 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm22031-201 | ENSMUST00000116945 | 126 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25978-201 | ENSMUST00000158698 | 90 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26359-201 | ENSMUST00000158873 | 101 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26291-201 | ENSMUST00000158889 | 137 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm42677-201 | ENSMUST00000196363 | 127 nt | BASIC | -0,52 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24580-201 | ENSMUST00000103965 | 131 nt | BASIC | -0,53 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23528-201 | ENSMUST00000104571 | 132 nt | BASIC | -0,53 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25425-201 | ENSMUST00000157611 | 96 nt | BASIC | -0,53 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm37796-201 | ENSMUST00000195327 | 134 nt | BASIC | -0,53 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Snora16a-201 | ENSMUST00000083163 | 136 nt | BASIC | -0,53 | □□□□□ -2,49 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25510-201 | ENSMUST00000116986 | 123 nt | BASIC | -0,54 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Igkv13-78-1-201 | ENSMUST00000199298 | 200 nt | BASIC | -0,54 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | mt-Tt-201 | ENSMUST00000082422 | 67 nt | BASIC | -0,54 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24593-201 | ENSMUST00000122507 | 106 nt | BASIC | -0,55 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25071-201 | ENSMUST00000175232 | 70 nt | BASIC | -0,55 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm10351-201 | ENSMUST00000087694 | 125 nt | BASIC | -0,55 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | AC164561.1-201 | ENSMUST00000220414 | 115 nt | BASIC | -0,56 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26412-201 | ENSMUST00000157666 | 55 nt | BASIC | -0,57 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24823-201 | ENSMUST00000175092 | 91 nt | BASIC | -0,57 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25472-201 | ENSMUST00000175454 | 78 nt | BASIC | -0,57 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm44859-201 | ENSMUST00000207831 | 94 nt | BASIC | -0,57 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24894-201 | ENSMUST00000122744 | 118 nt | BASIC | -0,58 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24064-201 | ENSMUST00000157486 | 106 nt | BASIC | -0,58 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25388-201 | ENSMUST00000157339 | 151 nt | BASIC | -0,59 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25772-201 | ENSMUST00000158574 | 56 nt | BASIC | -0,59 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm27749-201 | ENSMUST00000183651 | 125 nt | BASIC | -0,59 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26207-201 | ENSMUST00000082909 | 104 nt | BASIC | -0,59 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Snord42b-201 | ENSMUST00000083742 | 69 nt | BASIC | -0,59 | □□□□□ -2,5 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25622-201 | ENSMUST00000157217 | 104 nt | BASIC | -0,6 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23988-201 | ENSMUST00000117034 | 122 nt | BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24868-201 | ENSMUST00000157265 | 136 nt | BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm24077-201 | ENSMUST00000158183 | 136 nt | BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25596-201 | ENSMUST00000178368 | 107 nt | BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm39149-201 | ENSMUST00000210258 | 186 nt | TSL 5 BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23690-201 | ENSMUST00000083036 | 94 nt | BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Mir7-1-201 | ENSMUST00000083500 | 108 nt | BASIC | -0,61 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | AC140930.2-201 | ENSMUST00000221803 | 109 nt | BASIC | -0,62 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | mt-Tl1-201 | ENSMUST00000082391 | 75 nt | BASIC | -0,62 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm25137-201 | ENSMUST00000083251 | 110 nt | BASIC | -0,62 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Mir96-201 | ENSMUST00000083652 | 106 nt | BASIC | -0,62 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm26109-201 | ENSMUST00000083970 | 70 nt | BASIC | -0,62 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm23434-201 | ENSMUST00000157179 | 100 nt | BASIC | -0,63 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm22157-201 | ENSMUST00000158410 | 104 nt | BASIC | -0,63 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Gm45741-201 | ENSMUST00000212661 | 152 nt | TSL 1 (best) BASIC | -0,63 | □□□□□ -2,51 | | |
Trbv13-3 | A0A0B4J1H2 | Snord49b-201 | ENSMUST00000082503 | 72 nt | BASIC | -0,63 | □□□□□ -2,51 | | |
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms