Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Gm27511-201ENSMUST00000183502 127 ntBASIC1.92□□□□□ -2.1
Limd1Q9QXD8 Gm25820-201ENSMUST00000198589 127 ntBASIC1.92□□□□□ -2.1
Limd1Q9QXD8 Mir148b-201ENSMUST00000083626 97 ntBASIC1.92□□□□□ -2.1
Limd1Q9QXD8 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.91□□□□□ -2.1
Limd1Q9QXD8 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Limd1Q9QXD8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Limd1Q9QXD8 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
Limd1Q9QXD8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.9□□□□□ -2.11
Limd1Q9QXD8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Limd1Q9QXD8 U6.1-201ENSMUST00000157443 101 ntBASIC1.9□□□□□ -2.11
Limd1Q9QXD8 Gm26485-201ENSMUST00000158019 64 ntBASIC1.9□□□□□ -2.11
Limd1Q9QXD8 Gm26359-201ENSMUST00000158873 101 ntBASIC1.9□□□□□ -2.11
Limd1Q9QXD8 Gm18433-201ENSMUST00000192747 197 ntBASIC1.9□□□□□ -2.11
Limd1Q9QXD8 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.9□□□□□ -2.11
Limd1Q9QXD8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Gm23991-201ENSMUST00000117033 93 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Gm23469-201ENSMUST00000157131 104 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Gm24262-201ENSMUST00000157431 144 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Gm24770-201ENSMUST00000158505 92 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Gm23813-201ENSMUST00000175153 77 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Gm23726-201ENSMUST00000178937 67 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Mir30d-201ENSMUST00000083503 82 ntBASIC1.89□□□□□ -2.11
Limd1Q9QXD8 Snord69-201ENSMUST00000104024 80 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 Gm24983-201ENSMUST00000104457 69 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 Gm11966-201ENSMUST00000119907 87 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 Gm24549-201ENSMUST00000158647 139 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 Gm22413-201ENSMUST00000175465 85 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 Gm26224-201ENSMUST00000082506 80 ntBASIC1.88□□□□□ -2.11
Limd1Q9QXD8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Limd1Q9QXD8 Gm24378-201ENSMUST00000122699 106 ntBASIC1.87□□□□□ -2.11
Limd1Q9QXD8 Gm23500-201ENSMUST00000157735 98 ntBASIC1.87□□□□□ -2.11
Limd1Q9QXD8 Gm23306-201ENSMUST00000179058 105 ntBASIC1.87□□□□□ -2.11
Limd1Q9QXD8 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.87□□□□□ -2.11
Limd1Q9QXD8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.86□□□□□ -2.11
Limd1Q9QXD8 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.86□□□□□ -2.11
Limd1Q9QXD8 Gm23785-201ENSMUST00000116741 96 ntBASIC1.85□□□□□ -2.11
Limd1Q9QXD8 Gm22406-201ENSMUST00000174923 93 ntBASIC1.85□□□□□ -2.11
Limd1Q9QXD8 Gm38323-201ENSMUST00000192450 210 ntBASIC1.85□□□□□ -2.11
Limd1Q9QXD8 Mir377-201ENSMUST00000083504 68 ntBASIC1.85□□□□□ -2.11
Limd1Q9QXD8 Gm25756-201ENSMUST00000103990 136 ntBASIC1.84□□□□□ -2.11
Limd1Q9QXD8 Gm26181-201ENSMUST00000157687 106 ntBASIC1.84□□□□□ -2.11
Limd1Q9QXD8 Gm24808-201ENSMUST00000157993 118 ntBASIC1.84□□□□□ -2.11
Limd1Q9QXD8 Gm26029-201ENSMUST00000158659 132 ntBASIC1.84□□□□□ -2.11
Limd1Q9QXD8 Gm23714-201ENSMUST00000179259 105 ntBASIC1.84□□□□□ -2.11
Limd1Q9QXD8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Gm22786-201ENSMUST00000104086 122 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Gm24902-201ENSMUST00000158126 123 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Gm23477-201ENSMUST00000158882 128 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Gm25831-201ENSMUST00000158924 163 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Mir6995-201ENSMUST00000183658 71 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Mir376b-201ENSMUST00000195930 82 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Mir320-201ENSMUST00000083594 82 ntBASIC1.83□□□□□ -2.12
Limd1Q9QXD8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Limd1Q9QXD8 Gm25040-201ENSMUST00000103877 66 ntBASIC1.82□□□□□ -2.12
Limd1Q9QXD8 Snord2-201ENSMUST00000157899 69 ntBASIC1.82□□□□□ -2.12
Limd1Q9QXD8 Gm28383-201ENSMUST00000187563 139 ntBASIC1.82□□□□□ -2.12
Limd1Q9QXD8 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Limd1Q9QXD8 Gm24984-201ENSMUST00000104454 133 ntBASIC1.81□□□□□ -2.12
Limd1Q9QXD8 Gm25968-201ENSMUST00000157167 100 ntBASIC1.81□□□□□ -2.12
Limd1Q9QXD8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Limd1Q9QXD8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Limd1Q9QXD8 Mir3096-201ENSMUST00000116685 71 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm24783-201ENSMUST00000157639 100 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm24073-201ENSMUST00000158177 106 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm23967-201ENSMUST00000175062 78 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Mir100-201ENSMUST00000175270 80 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm23267-201ENSMUST00000178490 132 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm24134-201ENSMUST00000083361 71 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Mir500-201ENSMUST00000093600 92 ntBASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Limd1Q9QXD8 Gm6272-201ENSMUST00000121256 171 ntBASIC1.79□□□□□ -2.12
Limd1Q9QXD8 Gm28794-201ENSMUST00000185276 136 ntBASIC1.79□□□□□ -2.12
Limd1Q9QXD8 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Limd1Q9QXD8 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Limd1Q9QXD8 Mir3064-201ENSMUST00000175532 67 ntBASIC1.78□□□□□ -2.12
Limd1Q9QXD8 Gm22048-201ENSMUST00000104721 89 ntBASIC1.77□□□□□ -2.13
Limd1Q9QXD8 Traj60-201ENSMUST00000167781 54 ntBASIC1.77□□□□□ -2.13
Limd1Q9QXD8 Gm16399-201ENSMUST00000181423 219 ntBASIC1.77□□□□□ -2.13
Limd1Q9QXD8 Gm22652-201ENSMUST00000083207 131 ntBASIC1.77□□□□□ -2.13
Limd1Q9QXD8 Mir126a-201ENSMUST00000083606 73 ntBASIC1.77□□□□□ -2.13
Limd1Q9QXD8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Limd1Q9QXD8 Mir873a-201ENSMUST00000104863 77 ntBASIC1.76□□□□□ -2.13
Limd1Q9QXD8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
Limd1Q9QXD8 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.76□□□□□ -2.13
Limd1Q9QXD8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.75□□□□□ -2.13
Limd1Q9QXD8 Gm11857-201ENSMUST00000119817 324 ntBASIC1.75□□□□□ -2.13
Limd1Q9QXD8 Gm24154-201ENSMUST00000175261 130 ntBASIC1.75□□□□□ -2.13
Limd1Q9QXD8 Gm27717-201ENSMUST00000183933 151 ntBASIC1.75□□□□□ -2.13
Limd1Q9QXD8 Mir1949-202ENSMUST00000199259 70 ntBASIC1.75□□□□□ -2.13
Limd1Q9QXD8 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Limd1Q9QXD8 Gm13065-201ENSMUST00000119178 141 ntBASIC1.74□□□□□ -2.13
Limd1Q9QXD8 Gm22203-201ENSMUST00000158605 58 ntBASIC1.74□□□□□ -2.13
Limd1Q9QXD8 Mir6342-201ENSMUST00000183870 125 ntBASIC1.74□□□□□ -2.13
Limd1Q9QXD8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms