Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm11966-201ENSMUST00000119907 87 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Gm25279-201ENSMUST00000122608 133 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Gm22406-201ENSMUST00000174923 93 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Gm22413-201ENSMUST00000175465 85 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Mir6351-201ENSMUST00000183826 99 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Gm25820-202ENSMUST00000197479 128 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trim39Q9ESN2 Gm25756-201ENSMUST00000103990 136 ntBASIC1.55□□□□□ -2.16
Trim39Q9ESN2 Gm25416-201ENSMUST00000104221 107 ntBASIC1.55□□□□□ -2.16
Trim39Q9ESN2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.55□□□□□ -2.16
Trim39Q9ESN2 Mir7679-201ENSMUST00000183379 63 ntBASIC1.55□□□□□ -2.16
Trim39Q9ESN2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.55□□□□□ -2.16
Trim39Q9ESN2 Gm22786-201ENSMUST00000104086 122 ntBASIC1.54□□□□□ -2.16
Trim39Q9ESN2 Gm22551-201ENSMUST00000157795 103 ntBASIC1.54□□□□□ -2.16
Trim39Q9ESN2 Mir6352-201ENSMUST00000184495 116 ntBASIC1.54□□□□□ -2.16
Trim39Q9ESN2 Mir758-201ENSMUST00000103260 81 ntBASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Gm25759-201ENSMUST00000103988 129 ntBASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Gm24983-201ENSMUST00000104457 69 ntBASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Gm22664-201ENSMUST00000158719 105 ntBASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Mir100-201ENSMUST00000175270 80 ntBASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Gm24311-201ENSMUST00000082570 104 ntBASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
Trim39Q9ESN2 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trim39Q9ESN2 Snord69-201ENSMUST00000104024 80 ntBASIC1.52□□□□□ -2.17
Trim39Q9ESN2 Mir6342-201ENSMUST00000183870 125 ntBASIC1.52□□□□□ -2.17
Trim39Q9ESN2 Gm18433-201ENSMUST00000192747 197 ntBASIC1.52□□□□□ -2.17
Trim39Q9ESN2 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Trim39Q9ESN2 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Trim39Q9ESN2 Mir3064-201ENSMUST00000175532 67 ntBASIC1.51□□□□□ -2.17
Trim39Q9ESN2 Mir6406-201ENSMUST00000183592 120 ntBASIC1.51□□□□□ -2.17
Trim39Q9ESN2 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.51□□□□□ -2.17
Trim39Q9ESN2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Gm25968-201ENSMUST00000157167 100 ntBASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Snord2-201ENSMUST00000157899 69 ntBASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Traj60-201ENSMUST00000167781 54 ntBASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Mir376b-201ENSMUST00000195930 82 ntBASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.5□□□□□ -2.17
Trim39Q9ESN2 Gm22203-201ENSMUST00000158605 58 ntBASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Gm25836-201ENSMUST00000158918 123 ntBASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Gm27248-201ENSMUST00000184004 166 ntBASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Gm43512-201ENSMUST00000198495 176 ntBASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Mir377-201ENSMUST00000083504 68 ntBASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Trim39Q9ESN2 Mir741-201ENSMUST00000103931 71 ntBASIC1.48□□□□□ -2.17
Trim39Q9ESN2 Gm22048-201ENSMUST00000104721 89 ntBASIC1.48□□□□□ -2.17
Trim39Q9ESN2 Gm6272-201ENSMUST00000121256 171 ntBASIC1.48□□□□□ -2.17
Trim39Q9ESN2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Trim39Q9ESN2 Gm24134-201ENSMUST00000083361 71 ntBASIC1.48□□□□□ -2.17
Trim39Q9ESN2 Mir126a-201ENSMUST00000083606 73 ntBASIC1.48□□□□□ -2.17
Trim39Q9ESN2 Mir500-201ENSMUST00000093600 92 ntBASIC1.48□□□□□ -2.17
Trim39Q9ESN2 Gm23951-201ENSMUST00000104029 132 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm23500-201ENSMUST00000157735 98 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm24808-201ENSMUST00000157993 118 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm24177-201ENSMUST00000158927 131 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm16399-201ENSMUST00000181423 219 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Mir7026-201ENSMUST00000184384 67 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm26922-201ENSMUST00000082687 72 ntBASIC1.47□□□□□ -2.17
Trim39Q9ESN2 Gm24271-201ENSMUST00000102327 111 ntBASIC1.46□□□□□ -2.18
Trim39Q9ESN2 Mir7017-201ENSMUST00000184894 62 ntBASIC1.46□□□□□ -2.18
Trim39Q9ESN2 Gm38323-201ENSMUST00000192450 210 ntBASIC1.46□□□□□ -2.18
Trim39Q9ESN2 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.46□□□□□ -2.18
Trim39Q9ESN2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim39Q9ESN2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.45□□□□□ -2.18
Trim39Q9ESN2 Gm25040-201ENSMUST00000103877 66 ntBASIC1.45□□□□□ -2.18
Trim39Q9ESN2 Gm22233-201ENSMUST00000157464 114 ntBASIC1.45□□□□□ -2.18
Trim39Q9ESN2 Gm26181-201ENSMUST00000157687 106 ntBASIC1.45□□□□□ -2.18
Trim39Q9ESN2 Gm25868-201ENSMUST00000158253 114 ntBASIC1.45□□□□□ -2.18
Trim39Q9ESN2 Gm22723-201ENSMUST00000083820 129 ntBASIC1.45□□□□□ -2.18
Trim39Q9ESN2 Gm23336-201ENSMUST00000117023 123 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Gm23477-201ENSMUST00000158882 128 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Gm25328-201ENSMUST00000175013 107 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Gm24154-201ENSMUST00000175261 130 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Mir3079-201ENSMUST00000175428 90 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Mir148b-201ENSMUST00000083626 97 ntBASIC1.44□□□□□ -2.18
Trim39Q9ESN2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Snord13-201ENSMUST00000157627 104 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Gm7258-201ENSMUST00000179317 300 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Mir7014-201ENSMUST00000183853 63 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Mir7118-201ENSMUST00000197760 61 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Gm22652-201ENSMUST00000083207 131 ntBASIC1.43□□□□□ -2.18
Trim39Q9ESN2 Gm13065-201ENSMUST00000119178 141 ntBASIC1.42□□□□□ -2.18
Trim39Q9ESN2 Mir1949-202ENSMUST00000199259 70 ntBASIC1.42□□□□□ -2.18
Trim39Q9ESN2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trim39Q9ESN2 Gm37579-201ENSMUST00000194291 142 ntBASIC1.41□□□□□ -2.18
Trim39Q9ESN2 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.41□□□□□ -2.18
Trim39Q9ESN2 Gm23010-201ENSMUST00000104151 126 ntBASIC1.4□□□□□ -2.19
Trim39Q9ESN2 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trim39Q9ESN2 Gm27549-201ENSMUST00000183508 62 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms