Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm24077-201ENSMUST00000158183 136 ntBASIC1,47□□□□□ -2,17
Rnf111Q99ML9 Mir8119-201ENSMUST00000183371 129 ntBASIC1,47□□□□□ -2,17
Rnf111Q99ML9 Gm23301-201ENSMUST00000082713 65 ntBASIC1,47□□□□□ -2,17
Rnf111Q99ML9 Gm26207-201ENSMUST00000082909 104 ntBASIC1,47□□□□□ -2,17
Rnf111Q99ML9 Gm24902-201ENSMUST00000158126 123 ntBASIC1,46□□□□□ -2,18
Rnf111Q99ML9 Gm24222-201ENSMUST00000158834 93 ntBASIC1,46□□□□□ -2,18
Rnf111Q99ML9 Gm27326-201ENSMUST00000183504 95 ntBASIC1,46□□□□□ -2,18
Rnf111Q99ML9 Gm26224-201ENSMUST00000082506 80 ntBASIC1,46□□□□□ -2,18
Rnf111Q99ML9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1,46□□□□□ -2,18
Rnf111Q99ML9 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1,46□□□□□ -2,18
Rnf111Q99ML9 Mir216b-201ENSMUST00000102363 86 ntBASIC1,45□□□□□ -2,18
Rnf111Q99ML9 Gm24064-201ENSMUST00000157486 106 ntBASIC1,45□□□□□ -2,18
Rnf111Q99ML9 Gm22788-201ENSMUST00000157876 61 ntBASIC1,45□□□□□ -2,18
Rnf111Q99ML9 Gm23221-201ENSMUST00000158118 93 ntBASIC1,45□□□□□ -2,18
Rnf111Q99ML9 Gm25870-201ENSMUST00000179845 79 ntBASIC1,45□□□□□ -2,18
Rnf111Q99ML9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1,44□□□□□ -2,18
Rnf111Q99ML9 Gm25831-201ENSMUST00000158924 163 ntBASIC1,44□□□□□ -2,18
Rnf111Q99ML9 Gm27265-201ENSMUST00000183559 77 ntBASIC1,44□□□□□ -2,18
Rnf111Q99ML9 Gm26082-201ENSMUST00000104070 127 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Gm24988-201ENSMUST00000104460 121 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Gm24895-201ENSMUST00000122742 74 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Gm22466-201ENSMUST00000175278 69 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Gm23291-201ENSMUST00000175611 78 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 AC116319.1-201ENSMUST00000227765 222 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Gm24202-201ENSMUST00000082948 103 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Mir320-201ENSMUST00000083594 82 ntBASIC1,43□□□□□ -2,18
Rnf111Q99ML9 Gm24271-201ENSMUST00000102327 111 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Gm23558-201ENSMUST00000157823 80 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Gm22541-201ENSMUST00000158165 127 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Mir6240-201ENSMUST00000184281 117 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Mir7665-201ENSMUST00000184907 63 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Gm43911-201ENSMUST00000203097 76 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Gm44962-201ENSMUST00000206460 279 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Mir30a-201ENSMUST00000083471 71 ntBASIC1,42□□□□□ -2,18
Rnf111Q99ML9 Snord69-201ENSMUST00000104024 80 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Gm25622-201ENSMUST00000157217 104 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Gm24808-201ENSMUST00000157993 118 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Traj60-201ENSMUST00000167781 54 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Gm24495-201ENSMUST00000178575 79 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Gm22253-201ENSMUST00000179870 79 ntBASIC1,41□□□□□ -2,18
Rnf111Q99ML9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,41□□□□□ -2,18
Rnf111Q99ML9 Gm24549-201ENSMUST00000158647 139 ntBASIC1,4□□□□□ -2,19
Rnf111Q99ML9 Gm43907-201ENSMUST00000203128 117 ntBASIC1,4□□□□□ -2,19
Rnf111Q99ML9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1,4□□□□□ -2,19
Rnf111Q99ML9 Gm11333-201ENSMUST00000119479 148 ntBASIC1,39□□□□□ -2,19
Rnf111Q99ML9 Gm25968-201ENSMUST00000157167 100 ntBASIC1,39□□□□□ -2,19
Rnf111Q99ML9 Gm16399-201ENSMUST00000181423 219 ntBASIC1,39□□□□□ -2,19
Rnf111Q99ML9 Gm27894-201ENSMUST00000184177 92 ntBASIC1,39□□□□□ -2,19
Rnf111Q99ML9 Gm23410-201ENSMUST00000179967 107 ntBASIC1,38□□□□□ -2,19
Rnf111Q99ML9 Gm38323-201ENSMUST00000192450 210 ntBASIC1,38□□□□□ -2,19
Rnf111Q99ML9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,38□□□□□ -2,19
Rnf111Q99ML9 AC211878.4-201ENSMUST00000220970 262 ntBASIC1,38□□□□□ -2,19
Rnf111Q99ML9 Gm22505-201ENSMUST00000082956 108 ntBASIC1,38□□□□□ -2,19
Rnf111Q99ML9 Gm22363-201ENSMUST00000083100 108 ntBASIC1,38□□□□□ -2,19
Rnf111Q99ML9 Gm23814-201ENSMUST00000083230 102 ntBASIC1,38□□□□□ -2,19
Rnf111Q99ML9 Gm22786-201ENSMUST00000104086 122 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Gm25416-201ENSMUST00000104221 107 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Gm22673-201ENSMUST00000104415 131 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Gm23991-201ENSMUST00000117033 93 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Gm25366-201ENSMUST00000158845 124 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Gm25160-201ENSMUST00000158914 102 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Mir3968-201ENSMUST00000175355 100 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Mir6962-201ENSMUST00000199512 63 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Snora75-201ENSMUST00000082903 133 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Gm23570-201ENSMUST00000083029 104 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Mir500-201ENSMUST00000093600 92 ntBASIC1,37□□□□□ -2,19
Rnf111Q99ML9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1,36□□□□□ -2,19
Rnf111Q99ML9 Gm25759-201ENSMUST00000103988 129 ntBASIC1,36□□□□□ -2,19
Rnf111Q99ML9 Gm23237-201ENSMUST00000104639 92 ntBASIC1,36□□□□□ -2,19
Rnf111Q99ML9 Gm26499-201ENSMUST00000178544 79 ntBASIC1,36□□□□□ -2,19
Rnf111Q99ML9 Gm26096-201ENSMUST00000179084 79 ntBASIC1,36□□□□□ -2,19
Rnf111Q99ML9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1,36□□□□□ -2,19
Rnf111Q99ML9 Mir377-201ENSMUST00000083504 68 ntBASIC1,36□□□□□ -2,19
Rnf111Q99ML9 Gm25274-201ENSMUST00000104296 135 ntBASIC1,35□□□□□ -2,19
Rnf111Q99ML9 Gm22100-201ENSMUST00000157926 63 ntBASIC1,35□□□□□ -2,19
Rnf111Q99ML9 Gm44490-201ENSMUST00000198566 127 ntBASIC1,35□□□□□ -2,19
Rnf111Q99ML9 Gm24311-201ENSMUST00000082570 104 ntBASIC1,35□□□□□ -2,19
Rnf111Q99ML9 Mir200b-201ENSMUST00000083615 70 ntBASIC1,35□□□□□ -2,19
Rnf111Q99ML9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1,35□□□□□ -2,19
Rnf111Q99ML9 Gm6985-201ENSMUST00000121255 271 ntBASIC1,34□□□□□ -2,19
Rnf111Q99ML9 Gm6272-201ENSMUST00000121256 171 ntBASIC1,34□□□□□ -2,19
Rnf111Q99ML9 Mir100-201ENSMUST00000175270 80 ntBASIC1,34□□□□□ -2,19
Rnf111Q99ML9 Gm27493-201ENSMUST00000184128 78 ntBASIC1,34□□□□□ -2,19
Rnf111Q99ML9 Mir448-201ENSMUST00000083516 112 ntBASIC1,34□□□□□ -2,19
Rnf111Q99ML9 Gm25991-201ENSMUST00000102439 99 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm24983-201ENSMUST00000104457 69 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm22233-201ENSMUST00000157464 114 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm25868-201ENSMUST00000158253 114 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm23761-201ENSMUST00000158347 104 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm6293-201ENSMUST00000050339 195 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm23376-201ENSMUST00000082938 160 ntBASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1,33□□□□□ -2,2
Rnf111Q99ML9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,32□□□□□ -2,2
Rnf111Q99ML9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1,32□□□□□ -2,2
Rnf111Q99ML9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,32□□□□□ -2,2
Retrieved 100 of 76,532 protein–RNA pairs in 96,3 ms