Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.37□□□□□ -2.19
Nkx6-1Q99MA9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.37□□□□□ -2.19
Nkx6-1Q99MA9 Gm22030-201ENSMUST00000116942 63 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Gm22677-201ENSMUST00000116977 108 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Gm24549-201ENSMUST00000158647 139 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Gm24311-201ENSMUST00000082570 104 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Mir344-201ENSMUST00000083634 95 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Mir29a-201ENSMUST00000083676 88 ntBASIC1.36□□□□□ -2.19
Nkx6-1Q99MA9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Nkx6-1Q99MA9 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.35□□□□□ -2.19
Nkx6-1Q99MA9 Gm24384-201ENSMUST00000122693 75 ntBASIC1.35□□□□□ -2.19
Nkx6-1Q99MA9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.35□□□□□ -2.19
Nkx6-1Q99MA9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.35□□□□□ -2.19
Nkx6-1Q99MA9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.34□□□□□ -2.19
Nkx6-1Q99MA9 Gm22033-201ENSMUST00000116947 90 ntBASIC1.34□□□□□ -2.19
Nkx6-1Q99MA9 Gm23788-201ENSMUST00000122535 106 ntBASIC1.34□□□□□ -2.19
Nkx6-1Q99MA9 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.34□□□□□ -2.19
Nkx6-1Q99MA9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.34□□□□□ -2.19
Nkx6-1Q99MA9 Gm38323-201ENSMUST00000192450 210 ntBASIC1.34□□□□□ -2.19
Nkx6-1Q99MA9 Snord69-201ENSMUST00000104024 80 ntBASIC1.33□□□□□ -2.2
Nkx6-1Q99MA9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.33□□□□□ -2.2
Nkx6-1Q99MA9 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.33□□□□□ -2.2
Nkx6-1Q99MA9 Gm26478-201ENSMUST00000122611 133 ntBASIC1.33□□□□□ -2.2
Nkx6-1Q99MA9 Gm38295-201ENSMUST00000191951 151 ntBASIC1.33□□□□□ -2.2
Nkx6-1Q99MA9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Nkx6-1Q99MA9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Snord13-201ENSMUST00000157627 104 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Gm26712-201ENSMUST00000180813 217 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Gm3702-201ENSMUST00000211754 346 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Gm25128-201ENSMUST00000083339 76 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Gm24697-201ENSMUST00000083881 107 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Mir500-201ENSMUST00000093600 92 ntBASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Nkx6-1Q99MA9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 Mir3079-201ENSMUST00000175428 90 ntBASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 Gm22565-201ENSMUST00000175540 69 ntBASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 Mir5117-201ENSMUST00000083226 84 ntBASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.31□□□□□ -2.2
Nkx6-1Q99MA9 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.3□□□□□ -2.2
Nkx6-1Q99MA9 Gm6272-201ENSMUST00000121256 171 ntBASIC1.3□□□□□ -2.2
Nkx6-1Q99MA9 Gm22205-201ENSMUST00000122655 71 ntBASIC1.3□□□□□ -2.2
Nkx6-1Q99MA9 Gm22788-201ENSMUST00000157876 61 ntBASIC1.3□□□□□ -2.2
Nkx6-1Q99MA9 Gm22541-201ENSMUST00000158165 127 ntBASIC1.3□□□□□ -2.2
Nkx6-1Q99MA9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 Gm23468-201ENSMUST00000157125 108 ntBASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 Mir100-201ENSMUST00000175270 80 ntBASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 Mir509-201ENSMUST00000196089 75 ntBASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 Gm44458-201ENSMUST00000196594 143 ntBASIC1.29□□□□□ -2.2
Nkx6-1Q99MA9 Gm22732-201ENSMUST00000158093 121 ntBASIC1.28□□□□□ -2.2
Nkx6-1Q99MA9 Gm24221-201ENSMUST00000158833 313 ntBASIC1.28□□□□□ -2.2
Nkx6-1Q99MA9 Gm24208-201ENSMUST00000082783 135 ntBASIC1.28□□□□□ -2.2
Nkx6-1Q99MA9 Gm23528-201ENSMUST00000104571 132 ntBASIC1.27□□□□□ -2.21
Nkx6-1Q99MA9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.27□□□□□ -2.21
Nkx6-1Q99MA9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.27□□□□□ -2.21
Nkx6-1Q99MA9 Gm27975-201ENSMUST00000184400 101 ntBASIC1.27□□□□□ -2.21
Nkx6-1Q99MA9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.27□□□□□ -2.21
Nkx6-1Q99MA9 Gm25696-201ENSMUST00000082900 105 ntBASIC1.27□□□□□ -2.21
Nkx6-1Q99MA9 Mir216b-201ENSMUST00000102363 86 ntBASIC1.26□□□□□ -2.21
Nkx6-1Q99MA9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.26□□□□□ -2.21
Nkx6-1Q99MA9 Gm42533-201ENSMUST00000196247 157 ntBASIC1.26□□□□□ -2.21
Nkx6-1Q99MA9 Gm14947-201ENSMUST00000133704 303 ntBASIC1.25□□□□□ -2.21
Nkx6-1Q99MA9 Gm23853-201ENSMUST00000158375 104 ntBASIC1.25□□□□□ -2.21
Nkx6-1Q99MA9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Nkx6-1Q99MA9 Gm28435-201ENSMUST00000185496 108 ntBASIC1.25□□□□□ -2.21
Nkx6-1Q99MA9 Gm29047-201ENSMUST00000189816 108 ntBASIC1.25□□□□□ -2.21
Nkx6-1Q99MA9 Mir377-201ENSMUST00000083504 68 ntBASIC1.25□□□□□ -2.21
Nkx6-1Q99MA9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.24□□□□□ -2.21
Nkx6-1Q99MA9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.24□□□□□ -2.21
Nkx6-1Q99MA9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.24□□□□□ -2.21
Nkx6-1Q99MA9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.24□□□□□ -2.21
Nkx6-1Q99MA9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.23□□□□□ -2.21
Nkx6-1Q99MA9 Gm24183-201ENSMUST00000122572 93 ntBASIC1.23□□□□□ -2.21
Nkx6-1Q99MA9 Mir6342-201ENSMUST00000183870 125 ntBASIC1.23□□□□□ -2.21
Nkx6-1Q99MA9 Gm43927-201ENSMUST00000204599 117 ntBASIC1.23□□□□□ -2.21
Nkx6-1Q99MA9 Gm22786-201ENSMUST00000104086 122 ntBASIC1.22□□□□□ -2.21
Nkx6-1Q99MA9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.22□□□□□ -2.21
Nkx6-1Q99MA9 Gm25715-201ENSMUST00000158627 125 ntBASIC1.22□□□□□ -2.21
Nkx6-1Q99MA9 Gm23291-201ENSMUST00000175611 78 ntBASIC1.22□□□□□ -2.21
Nkx6-1Q99MA9 Mir376b-201ENSMUST00000195930 82 ntBASIC1.22□□□□□ -2.21
Nkx6-1Q99MA9 Gm43907-201ENSMUST00000203128 117 ntBASIC1.22□□□□□ -2.21
Nkx6-1Q99MA9 Gm25061-201ENSMUST00000104665 107 ntBASIC1.21□□□□□ -2.22
Nkx6-1Q99MA9 Gm25787-201ENSMUST00000104709 92 ntBASIC1.21□□□□□ -2.22
Nkx6-1Q99MA9 Gm24073-201ENSMUST00000158177 106 ntBASIC1.21□□□□□ -2.22
Nkx6-1Q99MA9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.21□□□□□ -2.22
Nkx6-1Q99MA9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.21□□□□□ -2.22
Nkx6-1Q99MA9 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.2□□□□□ -2.22
Nkx6-1Q99MA9 Gm22074-201ENSMUST00000158595 113 ntBASIC1.2□□□□□ -2.22
Nkx6-1Q99MA9 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.2□□□□□ -2.22
Nkx6-1Q99MA9 Gm25161-201ENSMUST00000158913 132 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms