Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm25832-201ENSMUST00000104140 130 ntBASIC1,7□□□□□ -2,14
Sh3rf1Q69ZI1 Gm25279-201ENSMUST00000122608 133 ntBASIC1,7□□□□□ -2,14
Sh3rf1Q69ZI1 Gm23856-201ENSMUST00000158380 99 ntBASIC1,7□□□□□ -2,14
Sh3rf1Q69ZI1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1,7□□□□□ -2,14
Sh3rf1Q69ZI1 Gm44488-201ENSMUST00000199467 119 ntBASIC1,7□□□□□ -2,14
Sh3rf1Q69ZI1 Gm25068-201ENSMUST00000103895 110 ntBASIC1,69□□□□□ -2,14
Sh3rf1Q69ZI1 Gm6985-201ENSMUST00000121255 271 ntBASIC1,69□□□□□ -2,14
Sh3rf1Q69ZI1 Gm24379-201ENSMUST00000122695 86 ntBASIC1,69□□□□□ -2,14
Sh3rf1Q69ZI1 Gm23291-201ENSMUST00000175611 78 ntBASIC1,69□□□□□ -2,14
Sh3rf1Q69ZI1 Mir6351-201ENSMUST00000183826 99 ntBASIC1,69□□□□□ -2,14
Sh3rf1Q69ZI1 Gm24208-201ENSMUST00000082783 135 ntBASIC1,69□□□□□ -2,14
Sh3rf1Q69ZI1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm25663-201ENSMUST00000157698 135 ntBASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm26089-201ENSMUST00000157898 107 ntBASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm24677-201ENSMUST00000158755 150 ntBASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm25693-201ENSMUST00000175443 85 ntBASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm23267-201ENSMUST00000178490 132 ntBASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm36956-201ENSMUST00000193830 214 ntBASIC1,68□□□□□ -2,14
Sh3rf1Q69ZI1 Gm11857-201ENSMUST00000119817 324 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 Gm24476-201ENSMUST00000157437 131 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 Gm24290-201ENSMUST00000157634 96 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 Gm22788-201ENSMUST00000157876 61 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 Gm25366-201ENSMUST00000158845 124 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 Gm27248-201ENSMUST00000184004 166 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 AL772271.1-201ENSMUST00000196848 65 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 Gm44384-201ENSMUST00000200208 114 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1,67□□□□□ -2,14
Sh3rf1Q69ZI1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1,66□□□□□ -2,14
Sh3rf1Q69ZI1 Mir126a-201ENSMUST00000083606 73 ntBASIC1,66□□□□□ -2,14
Sh3rf1Q69ZI1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1,65□□□□□ -2,14
Sh3rf1Q69ZI1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1,65□□□□□ -2,14
Sh3rf1Q69ZI1 Mir709-201ENSMUST00000102190 88 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Mir216b-201ENSMUST00000102363 86 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Mir741-201ENSMUST00000103931 71 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Gm26038-201ENSMUST00000158151 106 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24226-201ENSMUST00000158826 97 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Gm27993-201ENSMUST00000184362 85 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Gm43907-201ENSMUST00000203128 117 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24134-201ENSMUST00000083361 71 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Mir148b-201ENSMUST00000083626 97 ntBASIC1,65□□□□□ -2,15
Sh3rf1Q69ZI1 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1,64□□□□□ -2,15
Sh3rf1Q69ZI1 Gm22030-201ENSMUST00000116942 63 ntBASIC1,64□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24174-201ENSMUST00000158933 111 ntBASIC1,64□□□□□ -2,15
Sh3rf1Q69ZI1 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1,64□□□□□ -2,15
Sh3rf1Q69ZI1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1,64□□□□□ -2,15
Sh3rf1Q69ZI1 Mir1961-201ENSMUST00000158643 112 ntBASIC1,63□□□□□ -2,15
Sh3rf1Q69ZI1 Gm22406-201ENSMUST00000174923 93 ntBASIC1,63□□□□□ -2,15
Sh3rf1Q69ZI1 Mir494-201ENSMUST00000093632 85 ntBASIC1,63□□□□□ -2,15
Sh3rf1Q69ZI1 Gm25496-201ENSMUST00000104430 120 ntBASIC1,62□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24983-201ENSMUST00000104457 69 ntBASIC1,62□□□□□ -2,15
Sh3rf1Q69ZI1 Gm25831-201ENSMUST00000158924 163 ntBASIC1,62□□□□□ -2,15
Sh3rf1Q69ZI1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1,62□□□□□ -2,15
Sh3rf1Q69ZI1 AC116319.1-201ENSMUST00000227765 222 ntBASIC1,62□□□□□ -2,15
Sh3rf1Q69ZI1 Gm18433-201ENSMUST00000192747 197 ntBASIC1,61□□□□□ -2,15
Sh3rf1Q69ZI1 Gm43944-201ENSMUST00000205220 120 ntBASIC1,61□□□□□ -2,15
Sh3rf1Q69ZI1 Snora75-201ENSMUST00000082903 133 ntBASIC1,61□□□□□ -2,15
Sh3rf1Q69ZI1 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1,61□□□□□ -2,15
Sh3rf1Q69ZI1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,61□□□□□ -2,15
Sh3rf1Q69ZI1 Gm22100-201ENSMUST00000157926 63 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24073-201ENSMUST00000158177 106 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Gm22203-201ENSMUST00000158605 58 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Gm23967-201ENSMUST00000175062 78 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24154-201ENSMUST00000175261 130 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Gm25300-201ENSMUST00000175284 84 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Snord45b-201ENSMUST00000082797 71 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24494-201ENSMUST00000083804 81 ntBASIC1,6□□□□□ -2,15
Sh3rf1Q69ZI1 Mir297-1-201ENSMUST00000103800 76 ntBASIC1,59□□□□□ -2,15
Sh3rf1Q69ZI1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1,59□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24902-201ENSMUST00000158126 123 ntBASIC1,59□□□□□ -2,15
Sh3rf1Q69ZI1 Gm22164-201ENSMUST00000158413 106 ntBASIC1,59□□□□□ -2,15
Sh3rf1Q69ZI1 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1,59□□□□□ -2,15
Sh3rf1Q69ZI1 Gm24262-201ENSMUST00000157431 144 ntBASIC1,58□□□□□ -2,16
Sh3rf1Q69ZI1 Gm26181-201ENSMUST00000157687 106 ntBASIC1,58□□□□□ -2,16
Sh3rf1Q69ZI1 Gm23114-201ENSMUST00000158478 117 ntBASIC1,58□□□□□ -2,16
Sh3rf1Q69ZI1 AC157278.1-201ENSMUST00000221621 148 ntBASIC1,58□□□□□ -2,16
Sh3rf1Q69ZI1 Gm5581-201ENSMUST00000072940 2550 ntBASIC1,58□□□□□ -2,16
Sh3rf1Q69ZI1 Gm22785-201ENSMUST00000104087 132 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Gm15115-201ENSMUST00000121145 264 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Gm27549-201ENSMUST00000183508 62 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Gm27265-201ENSMUST00000183559 77 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Gm28383-201ENSMUST00000187563 139 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Gm44396-201ENSMUST00000199843 114 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Gm23301-201ENSMUST00000082713 65 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Mir324-201ENSMUST00000083600 89 ntBASIC1,57□□□□□ -2,16
Sh3rf1Q69ZI1 Mir653-201ENSMUST00000102402 85 ntBASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 Gm25759-201ENSMUST00000103988 129 ntBASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 Mir8119-201ENSMUST00000183371 129 ntBASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 Gm27326-201ENSMUST00000183504 95 ntBASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 Gm28794-201ENSMUST00000185276 136 ntBASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,56□□□□□ -2,16
Sh3rf1Q69ZI1 Gm24701-201ENSMUST00000101946 105 ntBASIC1,55□□□□□ -2,16
Sh3rf1Q69ZI1 Gm22786-201ENSMUST00000104086 122 ntBASIC1,55□□□□□ -2,16
Sh3rf1Q69ZI1 Gm23991-201ENSMUST00000117033 93 ntBASIC1,55□□□□□ -2,16
Sh3rf1Q69ZI1 Gm22078-201ENSMUST00000157593 103 ntBASIC1,55□□□□□ -2,16
Sh3rf1Q69ZI1 Gm23500-201ENSMUST00000157735 98 ntBASIC1,55□□□□□ -2,16
Sh3rf1Q69ZI1 Mir1933-201ENSMUST00000158930 88 ntBASIC1,55□□□□□ -2,16
Retrieved 100 of 76,532 protein–RNA pairs in 102,6 ms