Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm25970-201ENSMUST00000157165 86 ntBASIC-2.15□□□□□ -2.75
Trav6d-4Q5R1I0 Gm26262-201ENSMUST00000158024 127 ntBASIC-2.15□□□□□ -2.75
Trav6d-4Q5R1I0 Gm23261-201ENSMUST00000158316 136 ntBASIC-2.15□□□□□ -2.75
Trav6d-4Q5R1I0 Gm27285-201ENSMUST00000183875 127 ntBASIC-2.15□□□□□ -2.75
Trav6d-4Q5R1I0 AC157602.1-201ENSMUST00000197446 105 ntBASIC-2.15□□□□□ -2.75
Trav6d-4Q5R1I0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC-2.16□□□□□ -2.76
Trav6d-4Q5R1I0 Mir1298-201ENSMUST00000116681 98 ntBASIC-2.16□□□□□ -2.76
Trav6d-4Q5R1I0 Gm25429-201ENSMUST00000157607 132 ntBASIC-2.16□□□□□ -2.76
Trav6d-4Q5R1I0 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-2.16□□□□□ -2.76
Trav6d-4Q5R1I0 Gm25410-201ENSMUST00000083758 137 ntBASIC-2.16□□□□□ -2.76
Trav6d-4Q5R1I0 Gm25991-201ENSMUST00000102439 99 ntBASIC-2.17□□□□□ -2.76
Trav6d-4Q5R1I0 Gm12815-201ENSMUST00000121737 135 ntBASIC-2.17□□□□□ -2.76
Trav6d-4Q5R1I0 Gm26026-201ENSMUST00000122726 123 ntBASIC-2.17□□□□□ -2.76
Trav6d-4Q5R1I0 Gm24913-201ENSMUST00000157286 107 ntBASIC-2.17□□□□□ -2.76
Trav6d-4Q5R1I0 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.17□□□□□ -2.76
Trav6d-4Q5R1I0 Gm23344-201ENSMUST00000083818 68 ntBASIC-2.17□□□□□ -2.76
Trav6d-4Q5R1I0 Gm26279-201ENSMUST00000157095 102 ntBASIC-2.18□□□□□ -2.76
Trav6d-4Q5R1I0 Gm17919-201ENSMUST00000173344 312 ntBASIC-2.18□□□□□ -2.76
Trav6d-4Q5R1I0 Gm25680-201ENSMUST00000116917 126 ntBASIC-2.19□□□□□ -2.76
Trav6d-4Q5R1I0 Gm22635-201ENSMUST00000116962 126 ntBASIC-2.19□□□□□ -2.76
Trav6d-4Q5R1I0 Gm24729-201ENSMUST00000158225 137 ntBASIC-2.19□□□□□ -2.76
Trav6d-4Q5R1I0 Gm27521-201ENSMUST00000184022 64 ntBASIC-2.19□□□□□ -2.76
Trav6d-4Q5R1I0 Gm24701-201ENSMUST00000101946 105 ntBASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 Gm25749-201ENSMUST00000175485 111 ntBASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 Gm22448-201ENSMUST00000179254 107 ntBASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 AC154296.2-201ENSMUST00000214696 545 ntBASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 Mir3071-201ENSMUST00000093621 80 ntBASIC-2.2□□□□□ -2.76
Trav6d-4Q5R1I0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-2.21□□□□□ -2.76
Trav6d-4Q5R1I0 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.21□□□□□ -2.76
Trav6d-4Q5R1I0 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.21□□□□□ -2.76
Trav6d-4Q5R1I0 Gm23260-201ENSMUST00000158317 172 ntBASIC-2.22□□□□□ -2.76
Trav6d-4Q5R1I0 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-2.22□□□□□ -2.76
Trav6d-4Q5R1I0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-2.22□□□□□ -2.76
Trav6d-4Q5R1I0 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-2.22□□□□□ -2.76
Trav6d-4Q5R1I0 Gm22451-201ENSMUST00000122803 151 ntBASIC-2.23□□□□□ -2.77
Trav6d-4Q5R1I0 Gm25653-201ENSMUST00000158473 138 ntBASIC-2.23□□□□□ -2.77
Trav6d-4Q5R1I0 Gm11835-201ENSMUST00000120635 663 ntBASIC-2.24□□□□□ -2.77
Trav6d-4Q5R1I0 Gm44858-201ENSMUST00000207360 154 ntBASIC-2.24□□□□□ -2.77
Trav6d-4Q5R1I0 Gm23303-201ENSMUST00000082714 152 ntBASIC-2.24□□□□□ -2.77
Trav6d-4Q5R1I0 Gm23214-201ENSMUST00000122716 157 ntBASIC-2.25□□□□□ -2.77
Trav6d-4Q5R1I0 Gm23351-201ENSMUST00000158427 125 ntBASIC-2.25□□□□□ -2.77
Trav6d-4Q5R1I0 Mir5624-201ENSMUST00000176635 61 ntBASIC-2.25□□□□□ -2.77
Trav6d-4Q5R1I0 Gm22805-201ENSMUST00000082739 107 ntBASIC-2.25□□□□□ -2.77
Trav6d-4Q5R1I0 Gm25684-201ENSMUST00000083941 107 ntBASIC-2.25□□□□□ -2.77
Trav6d-4Q5R1I0 Gm25010-201ENSMUST00000158403 65 ntBASIC-2.26□□□□□ -2.77
Trav6d-4Q5R1I0 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.26□□□□□ -2.77
Trav6d-4Q5R1I0 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.26□□□□□ -2.77
Trav6d-4Q5R1I0 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-2.26□□□□□ -2.77
Trav6d-4Q5R1I0 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Gm24232-201ENSMUST00000104314 132 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Snord19-201ENSMUST00000104609 76 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Gm25720-201ENSMUST00000157503 105 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Gm23017-201ENSMUST00000177583 72 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Mir7227-201ENSMUST00000200408 59 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Gm22055-201ENSMUST00000083388 107 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Gm10222-201ENSMUST00000088336 294 ntBASIC-2.27□□□□□ -2.77
Trav6d-4Q5R1I0 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-2.28□□□□□ -2.77
Trav6d-4Q5R1I0 AC166341.3-201ENSMUST00000221861 114 ntBASIC-2.28□□□□□ -2.77
Trav6d-4Q5R1I0 Gm26454-201ENSMUST00000082682 107 ntBASIC-2.28□□□□□ -2.77
Trav6d-4Q5R1I0 Mir702-201ENSMUST00000102285 109 ntBASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Gm27803-201ENSMUST00000183763 119 ntBASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Gm27755-201ENSMUST00000184623 132 ntBASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Gm27263-201ENSMUST00000184760 76 ntBASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Gm26125-201ENSMUST00000083357 107 ntBASIC-2.29□□□□□ -2.78
Trav6d-4Q5R1I0 Gm23607-201ENSMUST00000104550 126 ntBASIC-2.3□□□□□ -2.78
Trav6d-4Q5R1I0 Gm22708-201ENSMUST00000158987 103 ntBASIC-2.3□□□□□ -2.78
Trav6d-4Q5R1I0 Mir7093-201ENSMUST00000184195 101 ntBASIC-2.3□□□□□ -2.78
Trav6d-4Q5R1I0 Gm45125-201ENSMUST00000206908 151 ntBASIC-2.31□□□□□ -2.78
Trav6d-4Q5R1I0 Gm18502-201ENSMUST00000218679 199 ntBASIC-2.31□□□□□ -2.78
Trav6d-4Q5R1I0 Gm28020-201ENSMUST00000157739 67 ntBASIC-2.32□□□□□ -2.78
Trav6d-4Q5R1I0 Gm24393-201ENSMUST00000158135 97 ntBASIC-2.32□□□□□ -2.78
Trav6d-4Q5R1I0 Mir488-201ENSMUST00000093595 109 ntBASIC-2.32□□□□□ -2.78
Trav6d-4Q5R1I0 Mir875-201ENSMUST00000104698 78 ntBASIC-2.33□□□□□ -2.78
Trav6d-4Q5R1I0 Gm24697-201ENSMUST00000083881 107 ntBASIC-2.33□□□□□ -2.78
Trav6d-4Q5R1I0 Gm22165-201ENSMUST00000158414 103 ntBASIC-2.34□□□□□ -2.78
Trav6d-4Q5R1I0 Mir7673-201ENSMUST00000184567 64 ntBASIC-2.34□□□□□ -2.78
Trav6d-4Q5R1I0 Gm27747-201ENSMUST00000184707 85 ntBASIC-2.34□□□□□ -2.78
Trav6d-4Q5R1I0 Mir466p-201ENSMUST00000103925 89 ntBASIC-2.35□□□□□ -2.79
Trav6d-4Q5R1I0 Gm11644-201ENSMUST00000119735 150 ntBASIC-2.35□□□□□ -2.79
Trav6d-4Q5R1I0 Gm22503-201ENSMUST00000158983 115 ntBASIC-2.35□□□□□ -2.79
Trav6d-4Q5R1I0 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC-2.35□□□□□ -2.79
Trav6d-4Q5R1I0 Snord80-201ENSMUST00000083801 81 ntBASIC-2.35□□□□□ -2.79
Trav6d-4Q5R1I0 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.36□□□□□ -2.79
Trav6d-4Q5R1I0 Gm27476-201ENSMUST00000183366 104 ntBASIC-2.36□□□□□ -2.79
Trav6d-4Q5R1I0 Gm22476-201ENSMUST00000158902 100 ntBASIC-2.37□□□□□ -2.79
Trav6d-4Q5R1I0 Gm23445-201ENSMUST00000082800 107 ntBASIC-2.37□□□□□ -2.79
Trav6d-4Q5R1I0 Gm25512-201ENSMUST00000083863 107 ntBASIC-2.37□□□□□ -2.79
Trav6d-4Q5R1I0 Gm23986-201ENSMUST00000157144 63 ntBASIC-2.38□□□□□ -2.79
Trav6d-4Q5R1I0 Gm26084-201ENSMUST00000157903 104 ntBASIC-2.38□□□□□ -2.79
Trav6d-4Q5R1I0 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.38□□□□□ -2.79
Trav6d-4Q5R1I0 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.38□□□□□ -2.79
Trav6d-4Q5R1I0 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.39□□□□□ -2.79
Trav6d-4Q5R1I0 Gm22148-201ENSMUST00000104445 107 ntBASIC-2.39□□□□□ -2.79
Trav6d-4Q5R1I0 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.39□□□□□ -2.79
Trav6d-4Q5R1I0 Mir1948-201ENSMUST00000157325 85 ntBASIC-2.39□□□□□ -2.79
Retrieved 100 of 76,532 protein–RNA pairs in 255.5 ms