Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm25968-201ENSMUST00000157167 100 ntBASIC1.44□□□□□ -2.18
Shisa3Q3UPR0 Gm25836-201ENSMUST00000158918 123 ntBASIC1.44□□□□□ -2.18
Shisa3Q3UPR0 Traj60-201ENSMUST00000167781 54 ntBASIC1.44□□□□□ -2.18
Shisa3Q3UPR0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm24983-201ENSMUST00000104457 69 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm25619-201ENSMUST00000122621 104 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm25964-201ENSMUST00000157171 97 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm23048-201ENSMUST00000157237 129 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm23670-201ENSMUST00000157469 119 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Mir7679-201ENSMUST00000183379 63 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Mir3569-201ENSMUST00000185080 58 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Gm26922-201ENSMUST00000082687 72 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Mir500-201ENSMUST00000093600 92 ntBASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Shisa3Q3UPR0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm25040-201ENSMUST00000103877 66 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm22786-201ENSMUST00000104086 122 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm23826-201ENSMUST00000157394 119 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm24221-201ENSMUST00000158833 313 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm26359-201ENSMUST00000158873 101 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Mir6352-201ENSMUST00000184495 116 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm20305-201ENSMUST00000193226 177 ntBASIC1.42□□□□□ -2.18
Shisa3Q3UPR0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.41□□□□□ -2.18
Shisa3Q3UPR0 Gm23010-201ENSMUST00000104151 126 ntBASIC1.41□□□□□ -2.18
Shisa3Q3UPR0 Gm6272-201ENSMUST00000121256 171 ntBASIC1.41□□□□□ -2.18
Shisa3Q3UPR0 Gm24394-201ENSMUST00000158141 123 ntBASIC1.41□□□□□ -2.18
Shisa3Q3UPR0 Mir100-201ENSMUST00000175270 80 ntBASIC1.41□□□□□ -2.18
Shisa3Q3UPR0 Gm24311-201ENSMUST00000082570 104 ntBASIC1.41□□□□□ -2.18
Shisa3Q3UPR0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
Shisa3Q3UPR0 Gm25279-201ENSMUST00000122608 133 ntBASIC1.4□□□□□ -2.19
Shisa3Q3UPR0 Gm23500-201ENSMUST00000157735 98 ntBASIC1.4□□□□□ -2.19
Shisa3Q3UPR0 Gm22406-201ENSMUST00000174923 93 ntBASIC1.4□□□□□ -2.19
Shisa3Q3UPR0 Gm37579-201ENSMUST00000194291 142 ntBASIC1.4□□□□□ -2.19
Shisa3Q3UPR0 Mir376b-201ENSMUST00000195930 82 ntBASIC1.4□□□□□ -2.19
Shisa3Q3UPR0 Snord2-201ENSMUST00000157899 69 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Gm24073-201ENSMUST00000158177 106 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Gm22413-201ENSMUST00000175465 85 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Gm45754-201ENSMUST00000212380 279 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Gm25128-201ENSMUST00000083339 76 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
Shisa3Q3UPR0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Shisa3Q3UPR0 Gm25847-201ENSMUST00000116793 96 ntBASIC1.37□□□□□ -2.19
Shisa3Q3UPR0 Gm26181-201ENSMUST00000157687 106 ntBASIC1.37□□□□□ -2.19
Shisa3Q3UPR0 Gm23306-201ENSMUST00000179058 105 ntBASIC1.37□□□□□ -2.19
Shisa3Q3UPR0 Gm24918-201ENSMUST00000083022 130 ntBASIC1.37□□□□□ -2.19
Shisa3Q3UPR0 Gm15115-201ENSMUST00000121145 264 ntBASIC1.36□□□□□ -2.19
Shisa3Q3UPR0 Mir7009-201ENSMUST00000184519 64 ntBASIC1.36□□□□□ -2.19
Shisa3Q3UPR0 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.36□□□□□ -2.19
Shisa3Q3UPR0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Shisa3Q3UPR0 Gm22233-201ENSMUST00000157464 114 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm25868-201ENSMUST00000158253 114 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm25950-201ENSMUST00000175331 100 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Mir3079-201ENSMUST00000175428 90 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Mir6342-201ENSMUST00000183870 125 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm27717-201ENSMUST00000183933 151 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Mir7225-201ENSMUST00000184178 54 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm28383-201ENSMUST00000187563 139 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Mir1949-202ENSMUST00000199259 70 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm22652-201ENSMUST00000083207 131 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.35□□□□□ -2.19
Shisa3Q3UPR0 Gm22761-201ENSMUST00000102278 96 ntBASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Gm25756-201ENSMUST00000103990 136 ntBASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Gm13065-201ENSMUST00000119178 141 ntBASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Gm26485-201ENSMUST00000158019 64 ntBASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Gm7258-201ENSMUST00000179317 300 ntBASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.34□□□□□ -2.19
Shisa3Q3UPR0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Gm23989-201ENSMUST00000117030 66 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Gm23853-201ENSMUST00000158375 104 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Gm22203-201ENSMUST00000158605 58 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Gm23726-201ENSMUST00000178937 67 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Gm25354-201ENSMUST00000179110 105 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Gm42533-201ENSMUST00000196247 157 ntBASIC1.33□□□□□ -2.2
Shisa3Q3UPR0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Gm23289-201ENSMUST00000175615 108 ntBASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Gm24134-201ENSMUST00000083361 71 ntBASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Mir126a-201ENSMUST00000083606 73 ntBASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Mir148b-201ENSMUST00000083626 97 ntBASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Shisa3Q3UPR0 Mir301b-201ENSMUST00000102333 97 ntBASIC1.31□□□□□ -2.2
Shisa3Q3UPR0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Shisa3Q3UPR0 Gm23708-201ENSMUST00000104367 123 ntBASIC1.31□□□□□ -2.2
Shisa3Q3UPR0 Gm11966-201ENSMUST00000119907 87 ntBASIC1.31□□□□□ -2.2
Shisa3Q3UPR0 Gm24222-201ENSMUST00000158834 93 ntBASIC1.31□□□□□ -2.2
Shisa3Q3UPR0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.31□□□□□ -2.2
Shisa3Q3UPR0 Gm23785-201ENSMUST00000116741 96 ntBASIC1.3□□□□□ -2.2
Shisa3Q3UPR0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms