Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Rnf40Q3U319 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Rnf40Q3U319 Gm22541-201ENSMUST00000158165 127 ntBASIC2.14□□□□□ -2.07
Rnf40Q3U319 Gm27937-201ENSMUST00000183605 88 ntBASIC2.14□□□□□ -2.07
Rnf40Q3U319 Mir378a-201ENSMUST00000198300 66 ntBASIC2.14□□□□□ -2.07
Rnf40Q3U319 Gm24274-201ENSMUST00000116787 124 ntBASIC2.13□□□□□ -2.07
Rnf40Q3U319 CT030170.1-201ENSMUST00000222183 148 ntBASIC2.13□□□□□ -2.07
Rnf40Q3U319 Gm25663-201ENSMUST00000157698 135 ntBASIC2.12□□□□□ -2.07
Rnf40Q3U319 Mir1933-201ENSMUST00000158930 88 ntBASIC2.12□□□□□ -2.07
Rnf40Q3U319 Gm27399-201ENSMUST00000184250 78 ntBASIC2.12□□□□□ -2.07
Rnf40Q3U319 Gm44384-201ENSMUST00000200208 114 ntBASIC2.12□□□□□ -2.07
Rnf40Q3U319 Gm24151-201ENSMUST00000082758 141 ntBASIC2.12□□□□□ -2.07
Rnf40Q3U319 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm23342-201ENSMUST00000158958 115 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm25641-201ENSMUST00000175135 108 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm22264-201ENSMUST00000178200 107 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Mir6995-201ENSMUST00000183658 71 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm27369-201ENSMUST00000185182 71 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm29432-201ENSMUST00000185397 139 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.11□□□□□ -2.07
Rnf40Q3U319 Gm26375-201ENSMUST00000101829 106 ntBASIC2.1□□□□□ -2.07
Rnf40Q3U319 Gm25040-201ENSMUST00000103877 66 ntBASIC2.1□□□□□ -2.07
Rnf40Q3U319 Gm25416-201ENSMUST00000104221 107 ntBASIC2.1□□□□□ -2.07
Rnf40Q3U319 Gm27511-201ENSMUST00000183502 127 ntBASIC2.1□□□□□ -2.07
Rnf40Q3U319 Mir6950-201ENSMUST00000184438 73 ntBASIC2.1□□□□□ -2.07
Rnf40Q3U319 Gm22459-201ENSMUST00000082577 108 ntBASIC2.1□□□□□ -2.07
Rnf40Q3U319 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm25068-201ENSMUST00000103895 110 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm23889-201ENSMUST00000122689 104 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm24783-201ENSMUST00000157639 100 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm26038-201ENSMUST00000158151 106 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm23114-201ENSMUST00000158478 117 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Mir7016-201ENSMUST00000184308 72 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm44396-201ENSMUST00000199843 114 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Mir377-201ENSMUST00000083504 68 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm24494-201ENSMUST00000083804 81 ntBASIC2.09□□□□□ -2.07
Rnf40Q3U319 Gm27959-201ENSMUST00000185172 111 ntBASIC2.08□□□□□ -2.08
Rnf40Q3U319 Gm26379-202ENSMUST00000200225 132 ntBASIC2.08□□□□□ -2.08
Rnf40Q3U319 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Rnf40Q3U319 Gm22099-201ENSMUST00000157925 123 ntBASIC2.07□□□□□ -2.08
Rnf40Q3U319 Mir344d-3-201ENSMUST00000175458 80 ntBASIC2.07□□□□□ -2.08
Rnf40Q3U319 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.07□□□□□ -2.08
Rnf40Q3U319 Mir7673-201ENSMUST00000184567 64 ntBASIC2.07□□□□□ -2.08
Rnf40Q3U319 Gm23301-201ENSMUST00000082713 65 ntBASIC2.07□□□□□ -2.08
Rnf40Q3U319 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Rnf40Q3U319 Snord69-201ENSMUST00000104024 80 ntBASIC2.06□□□□□ -2.08
Rnf40Q3U319 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.05□□□□□ -2.08
Rnf40Q3U319 Gm22717-201ENSMUST00000122703 171 ntBASIC2.05□□□□□ -2.08
Rnf40Q3U319 U6.1-201ENSMUST00000157443 101 ntBASIC2.05□□□□□ -2.08
Rnf40Q3U319 Gm22556-201ENSMUST00000157803 100 ntBASIC2.05□□□□□ -2.08
Rnf40Q3U319 Mir3098-201ENSMUST00000175416 87 ntBASIC2.05□□□□□ -2.08
Rnf40Q3U319 Gm22164-201ENSMUST00000158413 106 ntBASIC2.04□□□□□ -2.08
Rnf40Q3U319 Scarna3a-201ENSMUST00000158911 140 ntBASIC2.04□□□□□ -2.08
Rnf40Q3U319 Gm28383-201ENSMUST00000187563 139 ntBASIC2.04□□□□□ -2.08
Rnf40Q3U319 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.04□□□□□ -2.08
Rnf40Q3U319 AC238676.2-201ENSMUST00000220910 94 ntBASIC2.04□□□□□ -2.08
Rnf40Q3U319 Gm22663-201ENSMUST00000158721 102 ntBASIC2.03□□□□□ -2.08
Rnf40Q3U319 Mir7009-201ENSMUST00000184519 64 ntBASIC2.03□□□□□ -2.08
Rnf40Q3U319 Gm44477-201ENSMUST00000199661 110 ntBASIC2.03□□□□□ -2.08
Rnf40Q3U319 Gm43944-201ENSMUST00000205220 120 ntBASIC2.03□□□□□ -2.08
Rnf40Q3U319 Gm26274-201ENSMUST00000157103 321 ntBASIC2.02□□□□□ -2.09
Rnf40Q3U319 Gm25010-201ENSMUST00000158403 65 ntBASIC2.02□□□□□ -2.09
Rnf40Q3U319 Mir6905-201ENSMUST00000184228 70 ntBASIC2.02□□□□□ -2.09
Rnf40Q3U319 Mir376b-201ENSMUST00000195930 82 ntBASIC2.02□□□□□ -2.09
Rnf40Q3U319 AC211878.4-201ENSMUST00000220970 262 ntBASIC2.02□□□□□ -2.09
Rnf40Q3U319 Mir3071-201ENSMUST00000093621 80 ntBASIC2.02□□□□□ -2.09
Rnf40Q3U319 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Rnf40Q3U319 Gm22466-201ENSMUST00000175278 69 ntBASIC2.01□□□□□ -2.09
Rnf40Q3U319 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.01□□□□□ -2.09
Rnf40Q3U319 Gm29344-201ENSMUST00000068143 210 ntBASIC2.01□□□□□ -2.09
Rnf40Q3U319 Gm26438-201ENSMUST00000082593 107 ntBASIC2.01□□□□□ -2.09
Rnf40Q3U319 Gm23012-201ENSMUST00000104149 83 ntBASIC2□□□□□ -2.09
Rnf40Q3U319 Gm27265-201ENSMUST00000183559 77 ntBASIC2□□□□□ -2.09
Rnf40Q3U319 Gm26491-201ENSMUST00000179268 121 ntBASIC1.99□□□□□ -2.09
Rnf40Q3U319 Mir6997-201ENSMUST00000184313 71 ntBASIC1.99□□□□□ -2.09
Rnf40Q3U319 Gm24165-201ENSMUST00000082718 128 ntBASIC1.99□□□□□ -2.09
Rnf40Q3U319 Gm22785-201ENSMUST00000104087 132 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Gm23708-201ENSMUST00000104367 123 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Gm23803-201ENSMUST00000104610 132 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Gm22727-201ENSMUST00000158090 116 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Mir6342-201ENSMUST00000183870 125 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Mir322-201ENSMUST00000083484 95 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.98□□□□□ -2.09
Rnf40Q3U319 Gm37778-201ENSMUST00000191732 190 ntBASIC1.97□□□□□ -2.09
Rnf40Q3U319 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.97□□□□□ -2.09
Rnf40Q3U319 Mir344e-201ENSMUST00000104677 66 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Mir3096-201ENSMUST00000116685 71 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Gm25541-201ENSMUST00000116888 126 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Gm25440-201ENSMUST00000158279 154 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Gm24500-201ENSMUST00000158447 124 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Gm24549-201ENSMUST00000158647 139 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Mir7017-201ENSMUST00000184894 62 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Mir6925-201ENSMUST00000197857 70 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Mir497-201ENSMUST00000200557 84 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Mir222-201ENSMUST00000083537 79 ntBASIC1.96□□□□□ -2.1
Rnf40Q3U319 Gm23130-201ENSMUST00000104252 74 ntBASIC1.95□□□□□ -2.1
Rnf40Q3U319 Gm24262-201ENSMUST00000157431 144 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 184.6 ms