Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm22801-201ENSMUST00000175624 84 ntBASIC1,11□□□□□ -2,23
Col28a1Q2UY11 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1,11□□□□□ -2,23
Col28a1Q2UY11 Gm44469-201ENSMUST00000198558 79 ntBASIC1,11□□□□□ -2,23
Col28a1Q2UY11 Gm23661-201ENSMUST00000122630 87 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Gm26089-201ENSMUST00000157898 107 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Gm22540-201ENSMUST00000158168 117 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Gm22164-201ENSMUST00000158413 106 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Gm22663-201ENSMUST00000158721 102 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Traj60-201ENSMUST00000167781 54 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Gm22565-201ENSMUST00000175540 69 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Gm44458-201ENSMUST00000196594 143 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Mir344-201ENSMUST00000083634 95 ntBASIC1,1□□□□□ -2,23
Col28a1Q2UY11 Mir709-201ENSMUST00000102190 88 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm22785-201ENSMUST00000104087 132 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm25110-201ENSMUST00000116684 121 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm25775-201ENSMUST00000116716 121 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm24795-201ENSMUST00000116737 121 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm25171-201ENSMUST00000116926 121 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm24942-201ENSMUST00000158328 114 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm25715-201ENSMUST00000158627 125 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Mir1961-201ENSMUST00000158643 112 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm23339-201ENSMUST00000158962 139 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm27415-201ENSMUST00000183720 95 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm27987-201ENSMUST00000184023 93 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Mir6390-201ENSMUST00000184405 129 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 AC157602.1-201ENSMUST00000197446 105 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Mir34c-201ENSMUST00000083653 77 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Mir29a-201ENSMUST00000083676 88 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm24162-201ENSMUST00000093665 102 ntBASIC1,09□□□□□ -2,23
Col28a1Q2UY11 Gm25542-201ENSMUST00000116889 94 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Gm26478-201ENSMUST00000122611 133 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Gm24648-201ENSMUST00000157111 132 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Gm24476-201ENSMUST00000157437 131 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Gm23857-201ENSMUST00000158379 111 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Gm24129-201ENSMUST00000158537 97 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Gm10548-202ENSMUST00000165672 272 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Mir7663-201ENSMUST00000183950 61 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1,08□□□□□ -2,24
Col28a1Q2UY11 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 Gm24009-201ENSMUST00000157734 93 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 Gm25740-201ENSMUST00000180247 107 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 Gm36956-201ENSMUST00000193830 214 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 Gm25854-201ENSMUST00000082792 72 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 Gm26202-201ENSMUST00000082910 65 ntBASIC1,07□□□□□ -2,24
Col28a1Q2UY11 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm24588-201ENSMUST00000116696 83 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm25322-201ENSMUST00000122556 104 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm22067-201ENSMUST00000122790 107 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm25056-201ENSMUST00000157372 62 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm25600-201ENSMUST00000158357 106 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm24547-201ENSMUST00000158649 149 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm26712-201ENSMUST00000180813 217 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm27297-201ENSMUST00000183395 105 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm38295-201ENSMUST00000191951 151 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Mir509-201ENSMUST00000196089 75 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm44488-201ENSMUST00000199467 119 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm44396-201ENSMUST00000199843 114 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm23056-201ENSMUST00000082803 111 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm23245-201ENSMUST00000083370 135 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Mir324-201ENSMUST00000083600 89 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm22753-201ENSMUST00000083657 107 ntBASIC1,06□□□□□ -2,24
Col28a1Q2UY11 Gm22522-201ENSMUST00000158271 151 ntBASIC1,05□□□□□ -2,24
Col28a1Q2UY11 Gm25974-201ENSMUST00000158701 94 ntBASIC1,05□□□□□ -2,24
Col28a1Q2UY11 Gm26158-201ENSMUST00000158973 119 ntBASIC1,05□□□□□ -2,24
Col28a1Q2UY11 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,05□□□□□ -2,24
Col28a1Q2UY11 Gm23293-201ENSMUST00000082552 104 ntBASIC1,05□□□□□ -2,24
Col28a1Q2UY11 Gm23347-201ENSMUST00000083823 82 ntBASIC1,05□□□□□ -2,24
Col28a1Q2UY11 Gm22539-201ENSMUST00000158167 117 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Gm23114-201ENSMUST00000158478 117 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Gm27993-201ENSMUST00000184362 85 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Gm28435-201ENSMUST00000185496 108 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Gm29047-201ENSMUST00000189816 108 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Gm43038-201ENSMUST00000202359 88 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Snord96a-201ENSMUST00000082791 81 ntBASIC1,04□□□□□ -2,24
Col28a1Q2UY11 Gm25506-201ENSMUST00000104339 70 ntBASIC1,03□□□□□ -2,24
Col28a1Q2UY11 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,03□□□□□ -2,24
Col28a1Q2UY11 Gm22074-201ENSMUST00000158595 113 ntBASIC1,03□□□□□ -2,24
Col28a1Q2UY11 Gm43927-201ENSMUST00000204599 117 ntBASIC1,03□□□□□ -2,24
Col28a1Q2UY11 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,03□□□□□ -2,24
Col28a1Q2UY11 Gm25417-201ENSMUST00000104212 131 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm23130-201ENSMUST00000104252 74 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm24868-201ENSMUST00000157265 136 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm24290-201ENSMUST00000157634 96 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm24777-201ENSMUST00000157644 107 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm24199-201ENSMUST00000157808 136 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm24077-201ENSMUST00000158183 136 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm25693-201ENSMUST00000175443 85 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Mir6381-201ENSMUST00000183426 87 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm43944-201ENSMUST00000205220 120 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 AC122335.1-201ENSMUST00000217587 175 ntBASIC1,02□□□□□ -2,25
Col28a1Q2UY11 Gm24988-201ENSMUST00000104460 121 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Gm22030-201ENSMUST00000116942 63 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Gm24064-201ENSMUST00000157486 106 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Mir1933-201ENSMUST00000158930 88 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Gm16399-201ENSMUST00000181423 219 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Gm27420-201ENSMUST00000183823 79 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Gm25798-201ENSMUST00000082641 107 ntBASIC1,01□□□□□ -2,25
Col28a1Q2UY11 Gm24208-201ENSMUST00000082783 135 ntBASIC1,01□□□□□ -2,25
Retrieved 100 of 76,532 protein–RNA pairs in 106,2 ms