Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm27450-201ENSMUST00000104632 90 ntBASIC1,99□□□□□ -2,09
Col17a1Q07563 Gm23900-201ENSMUST00000157569 108 ntBASIC1,99□□□□□ -2,09
Col17a1Q07563 Gm24686-201ENSMUST00000157755 93 ntBASIC1,99□□□□□ -2,09
Col17a1Q07563 Gm20391-201ENSMUST00000174722 106 ntBASIC1,99□□□□□ -2,09
Col17a1Q07563 Gm27977-201ENSMUST00000185159 111 ntBASIC1,99□□□□□ -2,09
Col17a1Q07563 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1,98□□□□□ -2,09
Col17a1Q07563 Gm24049-201ENSMUST00000102409 100 ntBASIC1,98□□□□□ -2,09
Col17a1Q07563 Gm23321-201ENSMUST00000104465 126 ntBASIC1,98□□□□□ -2,09
Col17a1Q07563 Gm24547-201ENSMUST00000158649 149 ntBASIC1,98□□□□□ -2,09
Col17a1Q07563 Gm25750-201ENSMUST00000175483 112 ntBASIC1,98□□□□□ -2,09
Col17a1Q07563 Gm24575-201ENSMUST00000175502 77 ntBASIC1,98□□□□□ -2,09
Col17a1Q07563 Mir494-201ENSMUST00000093632 85 ntBASIC1,98□□□□□ -2,09
Col17a1Q07563 Mir873a-201ENSMUST00000104863 77 ntBASIC1,97□□□□□ -2,09
Col17a1Q07563 Gm25619-201ENSMUST00000122621 104 ntBASIC1,97□□□□□ -2,09
Col17a1Q07563 Gm26358-201ENSMUST00000158215 97 ntBASIC1,97□□□□□ -2,09
Col17a1Q07563 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1,97□□□□□ -2,09
Col17a1Q07563 Gm24311-201ENSMUST00000082570 104 ntBASIC1,97□□□□□ -2,09
Col17a1Q07563 Gm25609-201ENSMUST00000104019 104 ntBASIC1,96□□□□□ -2,1
Col17a1Q07563 Gm24772-201ENSMUST00000158507 110 ntBASIC1,96□□□□□ -2,1
Col17a1Q07563 Gm24223-201ENSMUST00000158827 90 ntBASIC1,96□□□□□ -2,1
Col17a1Q07563 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1,96□□□□□ -2,1
Col17a1Q07563 AC157602.1-201ENSMUST00000197446 105 ntBASIC1,96□□□□□ -2,1
Col17a1Q07563 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1,96□□□□□ -2,1
Col17a1Q07563 Gm25756-201ENSMUST00000103990 136 ntBASIC1,95□□□□□ -2,1
Col17a1Q07563 Gm23482-201ENSMUST00000104172 122 ntBASIC1,95□□□□□ -2,1
Col17a1Q07563 Gm26133-201ENSMUST00000157363 100 ntBASIC1,95□□□□□ -2,1
Col17a1Q07563 Gm23672-201ENSMUST00000157471 107 ntBASIC1,95□□□□□ -2,1
Col17a1Q07563 Gm26213-201ENSMUST00000158582 110 ntBASIC1,95□□□□□ -2,1
Col17a1Q07563 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1,95□□□□□ -2,1
Col17a1Q07563 Gm24588-201ENSMUST00000116696 83 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm23170-201ENSMUST00000157158 106 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm22039-201ENSMUST00000157278 132 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm25183-201ENSMUST00000157752 106 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm24851-201ENSMUST00000158028 103 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm24221-201ENSMUST00000158833 313 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm26712-201ENSMUST00000180813 217 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm20118-201ENSMUST00000187207 162 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Snord45b-201ENSMUST00000082797 71 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Mir29a-201ENSMUST00000083676 88 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1,94□□□□□ -2,1
Col17a1Q07563 Mir1191-201ENSMUST00000116883 120 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 AC163289.1-201ENSMUST00000215919 262 ntBASIC1,94□□□□□ -2,1
Col17a1Q07563 Gm23278-201ENSMUST00000157911 143 ntBASIC1,93□□□□□ -2,1
Col17a1Q07563 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1,93□□□□□ -2,1
Col17a1Q07563 Gm44602-201ENSMUST00000205948 132 ntBASIC1,93□□□□□ -2,1
Col17a1Q07563 Gm23630-201ENSMUST00000175292 104 ntBASIC1,92□□□□□ -2,1
Col17a1Q07563 AC141438.3-201ENSMUST00000215632 202 ntBASIC1,92□□□□□ -2,1
Col17a1Q07563 Gm11694-201ENSMUST00000118637 159 ntBASIC1,91□□□□□ -2,1
Col17a1Q07563 Gm23996-201ENSMUST00000158062 131 ntBASIC1,91□□□□□ -2,1
Col17a1Q07563 Gm25368-201ENSMUST00000158847 131 ntBASIC1,91□□□□□ -2,1
Col17a1Q07563 Gm26359-201ENSMUST00000158873 101 ntBASIC1,91□□□□□ -2,1
Col17a1Q07563 Mir6388-201ENSMUST00000184417 75 ntBASIC1,91□□□□□ -2,1
Col17a1Q07563 Gm25652-201ENSMUST00000083780 103 ntBASIC1,91□□□□□ -2,1
Col17a1Q07563 Scarna9-201ENSMUST00000104318 70 ntBASIC1,9□□□□□ -2,11
Col17a1Q07563 Gm16539-201ENSMUST00000160086 327 ntBASIC1,9□□□□□ -2,11
Col17a1Q07563 Gm23649-201ENSMUST00000179007 107 ntBASIC1,9□□□□□ -2,11
Col17a1Q07563 Mir6904-201ENSMUST00000183443 67 ntBASIC1,9□□□□□ -2,11
Col17a1Q07563 Mir509-201ENSMUST00000196089 75 ntBASIC1,9□□□□□ -2,11
Col17a1Q07563 Gm24927-201ENSMUST00000083397 107 ntBASIC1,9□□□□□ -2,11
Col17a1Q07563 Gm25524-201ENSMUST00000101821 107 ntBASIC1,89□□□□□ -2,11
Col17a1Q07563 Mir297-1-201ENSMUST00000103800 76 ntBASIC1,89□□□□□ -2,11
Col17a1Q07563 Gm25886-201ENSMUST00000157780 114 ntBASIC1,89□□□□□ -2,11
Col17a1Q07563 Gm25949-201ENSMUST00000175333 114 ntBASIC1,89□□□□□ -2,11
Col17a1Q07563 Mir27b-201ENSMUST00000083541 73 ntBASIC1,89□□□□□ -2,11
Col17a1Q07563 Gm25622-201ENSMUST00000157217 104 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm23221-201ENSMUST00000158118 93 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm26139-201ENSMUST00000180098 107 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm27265-201ENSMUST00000183559 77 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Snora3-201ENSMUST00000083082 132 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Mir93-201ENSMUST00000083593 88 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm25991-201ENSMUST00000102439 99 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm14039-201ENSMUST00000118705 101 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm24509-201ENSMUST00000157086 101 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm25358-201ENSMUST00000157189 101 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Gm24333-201ENSMUST00000175101 84 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1,88□□□□□ -2,11
Col17a1Q07563 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,88□□□□□ -2,11
Col17a1Q07563 Mir741-201ENSMUST00000103931 71 ntBASIC1,87□□□□□ -2,11
Col17a1Q07563 Gm11857-201ENSMUST00000119817 324 ntBASIC1,87□□□□□ -2,11
Col17a1Q07563 n-R5s187-201ENSMUST00000122769 111 ntBASIC1,87□□□□□ -2,11
Col17a1Q07563 Gm24648-201ENSMUST00000157111 132 ntBASIC1,87□□□□□ -2,11
Col17a1Q07563 Gm22884-201ENSMUST00000083127 140 ntBASIC1,87□□□□□ -2,11
Col17a1Q07563 Gm24523-201ENSMUST00000083965 132 ntBASIC1,87□□□□□ -2,11
Col17a1Q07563 Gm23656-201ENSMUST00000122626 112 ntBASIC1,86□□□□□ -2,11
Col17a1Q07563 Mir300-201ENSMUST00000083485 79 ntBASIC1,86□□□□□ -2,11
Col17a1Q07563 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1,85□□□□□ -2,11
Col17a1Q07563 Gm23020-201ENSMUST00000158766 253 ntBASIC1,85□□□□□ -2,11
Col17a1Q07563 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1,85□□□□□ -2,11
Col17a1Q07563 Gm25186-201ENSMUST00000083909 108 ntBASIC1,85□□□□□ -2,11
Col17a1Q07563 Gm24725-201ENSMUST00000158229 125 ntBASIC1,84□□□□□ -2,11
Col17a1Q07563 Gm43927-201ENSMUST00000204599 117 ntBASIC1,84□□□□□ -2,11
Col17a1Q07563 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,83□□□□□ -2,12
Col17a1Q07563 Gm22544-201ENSMUST00000104349 127 ntBASIC1,83□□□□□ -2,12
Col17a1Q07563 Gm23994-201ENSMUST00000158059 88 ntBASIC1,83□□□□□ -2,12
Col17a1Q07563 Gm23763-201ENSMUST00000158345 60 ntBASIC1,83□□□□□ -2,12
Col17a1Q07563 Gm25788-201ENSMUST00000082721 131 ntBASIC1,83□□□□□ -2,12
Col17a1Q07563 Gm24134-201ENSMUST00000083361 71 ntBASIC1,83□□□□□ -2,12
Col17a1Q07563 Mir532-201ENSMUST00000093630 96 ntBASIC1,83□□□□□ -2,12
Col17a1Q07563 Gm24895-201ENSMUST00000122742 74 ntBASIC1,82□□□□□ -2,12
Col17a1Q07563 Gm20477-201ENSMUST00000174028 280 ntBASIC1,82□□□□□ -2,12
Retrieved 100 of 76,532 protein–RNA pairs in 105,1 ms