Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm23661-201ENSMUST00000122630 87 ntBASIC1.72□□□□□ -2.13
Col6a1Q04857 Gm24009-201ENSMUST00000157734 93 ntBASIC1.72□□□□□ -2.13
Col6a1Q04857 Gm10548-202ENSMUST00000165672 272 ntBASIC1.72□□□□□ -2.13
Col6a1Q04857 Gm25870-201ENSMUST00000179845 79 ntBASIC1.72□□□□□ -2.13
Col6a1Q04857 Gm26202-201ENSMUST00000082910 65 ntBASIC1.72□□□□□ -2.13
Col6a1Q04857 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Col6a1Q04857 Gm27656-201ENSMUST00000185055 80 ntBASIC1.71□□□□□ -2.14
Col6a1Q04857 Gm42506-201ENSMUST00000202009 150 ntBASIC1.71□□□□□ -2.14
Col6a1Q04857 Gm6293-201ENSMUST00000050339 195 ntBASIC1.71□□□□□ -2.14
Col6a1Q04857 Gm24624-201ENSMUST00000082617 164 ntBASIC1.71□□□□□ -2.14
Col6a1Q04857 Mir324-201ENSMUST00000083600 89 ntBASIC1.71□□□□□ -2.14
Col6a1Q04857 Mir6351-201ENSMUST00000183826 99 ntBASIC1.7□□□□□ -2.14
Col6a1Q04857 Mir6390-201ENSMUST00000184405 129 ntBASIC1.7□□□□□ -2.14
Col6a1Q04857 Mir468-201ENSMUST00000197332 78 ntBASIC1.7□□□□□ -2.14
Col6a1Q04857 Mir344-201ENSMUST00000083634 95 ntBASIC1.7□□□□□ -2.14
Col6a1Q04857 Gm24494-201ENSMUST00000083804 81 ntBASIC1.7□□□□□ -2.14
Col6a1Q04857 Gm25110-201ENSMUST00000116684 121 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm25775-201ENSMUST00000116716 121 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm24795-201ENSMUST00000116737 121 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm25171-201ENSMUST00000116926 121 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm23826-201ENSMUST00000157394 119 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm25600-201ENSMUST00000158357 106 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm24547-201ENSMUST00000158649 149 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm23340-201ENSMUST00000158955 123 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm22862-201ENSMUST00000178593 121 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm27993-201ENSMUST00000184362 85 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm44458-201ENSMUST00000196594 143 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.69□□□□□ -2.14
Col6a1Q04857 Gm24915-201ENSMUST00000157288 78 ntBASIC1.68□□□□□ -2.14
Col6a1Q04857 Gm23857-201ENSMUST00000158379 111 ntBASIC1.68□□□□□ -2.14
Col6a1Q04857 Mir1961-201ENSMUST00000158643 112 ntBASIC1.68□□□□□ -2.14
Col6a1Q04857 Gm36956-201ENSMUST00000193830 214 ntBASIC1.68□□□□□ -2.14
Col6a1Q04857 Gm25974-201ENSMUST00000158701 94 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Gm26712-201ENSMUST00000180813 217 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Gm27248-201ENSMUST00000184004 166 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Gm43944-201ENSMUST00000205220 120 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Gm24406-201ENSMUST00000083026 128 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Gm23570-201ENSMUST00000083029 104 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.67□□□□□ -2.14
Col6a1Q04857 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm22785-201ENSMUST00000104087 132 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm23122-201ENSMUST00000157645 103 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm26089-201ENSMUST00000157898 107 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm22164-201ENSMUST00000158413 106 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm26158-201ENSMUST00000158973 119 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm22095-201ENSMUST00000158984 150 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Gm25950-201ENSMUST00000175331 100 ntBASIC1.66□□□□□ -2.14
Col6a1Q04857 Snord71-201ENSMUST00000104361 85 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Gm24476-201ENSMUST00000157437 131 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Gm24174-201ENSMUST00000158933 111 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Col6a1Q04857 Gm38295-201ENSMUST00000191951 151 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Gm43927-201ENSMUST00000204599 117 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Gm23376-201ENSMUST00000082938 160 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Gm22753-201ENSMUST00000083657 107 ntBASIC1.65□□□□□ -2.15
Col6a1Q04857 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col6a1Q04857 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
Col6a1Q04857 Gm25622-201ENSMUST00000157217 104 ntBASIC1.64□□□□□ -2.15
Col6a1Q04857 Gm23328-201ENSMUST00000157418 132 ntBASIC1.64□□□□□ -2.15
Col6a1Q04857 Gm22603-201ENSMUST00000157603 96 ntBASIC1.64□□□□□ -2.15
Col6a1Q04857 Gm25160-201ENSMUST00000158914 102 ntBASIC1.64□□□□□ -2.15
Col6a1Q04857 Gm44488-201ENSMUST00000199467 119 ntBASIC1.64□□□□□ -2.15
Col6a1Q04857 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col6a1Q04857 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.63□□□□□ -2.15
Col6a1Q04857 Gm25693-201ENSMUST00000175443 85 ntBASIC1.63□□□□□ -2.15
Col6a1Q04857 Gm24208-201ENSMUST00000082783 135 ntBASIC1.63□□□□□ -2.15
Col6a1Q04857 Gm24202-201ENSMUST00000082948 103 ntBASIC1.63□□□□□ -2.15
Col6a1Q04857 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.63□□□□□ -2.15
Col6a1Q04857 Gm25847-201ENSMUST00000116793 96 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm24290-201ENSMUST00000157634 96 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm23558-201ENSMUST00000157823 80 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm22788-201ENSMUST00000157876 61 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm26499-201ENSMUST00000178544 79 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm26096-201ENSMUST00000179084 79 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm23301-201ENSMUST00000082713 65 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm24918-201ENSMUST00000083022 130 ntBASIC1.62□□□□□ -2.15
Col6a1Q04857 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.61□□□□□ -2.15
Col6a1Q04857 Mir196b-201ENSMUST00000083509 85 ntBASIC1.61□□□□□ -2.15
Col6a1Q04857 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm22469-201ENSMUST00000104118 133 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm22030-201ENSMUST00000116942 63 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm26274-201ENSMUST00000157103 321 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm22565-201ENSMUST00000175540 69 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm23291-201ENSMUST00000175611 78 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm27493-201ENSMUST00000184128 78 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Snord96a-201ENSMUST00000082791 81 ntBASIC1.6□□□□□ -2.15
Col6a1Q04857 Gm25609-201ENSMUST00000104019 104 ntBASIC1.59□□□□□ -2.15
Col6a1Q04857 Gm25495-201ENSMUST00000104431 131 ntBASIC1.59□□□□□ -2.15
Col6a1Q04857 Gm23114-201ENSMUST00000158478 117 ntBASIC1.59□□□□□ -2.15
Col6a1Q04857 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.59□□□□□ -2.15
Col6a1Q04857 Gm25991-201ENSMUST00000102439 99 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm25759-201ENSMUST00000103988 129 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm22780-201ENSMUST00000104084 132 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm22100-201ENSMUST00000157926 63 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Mir1933-201ENSMUST00000158930 88 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm23636-201ENSMUST00000175070 95 ntBASIC1.58□□□□□ -2.16
Col6a1Q04857 Gm27420-201ENSMUST00000183823 79 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms