Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm24378-201ENSMUST00000122699 106 ntBASIC1.51□□□□□ -2.17
Msx2Q03358 Gm27898-201ENSMUST00000183987 80 ntBASIC1.51□□□□□ -2.17
Msx2Q03358 Snord96a-201ENSMUST00000082791 81 ntBASIC1.51□□□□□ -2.17
Msx2Q03358 Gm25756-201ENSMUST00000103990 136 ntBASIC1.5□□□□□ -2.17
Msx2Q03358 Gm24290-201ENSMUST00000157634 96 ntBASIC1.5□□□□□ -2.17
Msx2Q03358 Gm26029-201ENSMUST00000158659 132 ntBASIC1.5□□□□□ -2.17
Msx2Q03358 Gm25693-201ENSMUST00000175443 85 ntBASIC1.5□□□□□ -2.17
Msx2Q03358 Mir7679-201ENSMUST00000183379 63 ntBASIC1.5□□□□□ -2.17
Msx2Q03358 Mir653-201ENSMUST00000102402 85 ntBASIC1.49□□□□□ -2.17
Msx2Q03358 Gm25991-201ENSMUST00000102439 99 ntBASIC1.49□□□□□ -2.17
Msx2Q03358 Mir758-201ENSMUST00000103260 81 ntBASIC1.49□□□□□ -2.17
Msx2Q03358 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Msx2Q03358 Gm6985-201ENSMUST00000121255 271 ntBASIC1.49□□□□□ -2.17
Msx2Q03358 Gm22788-201ENSMUST00000157876 61 ntBASIC1.49□□□□□ -2.17
Msx2Q03358 Mir669n-201ENSMUST00000158636 54 ntBASIC1.49□□□□□ -2.17
Msx2Q03358 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Msx2Q03358 Gm24895-201ENSMUST00000122742 74 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Gm24394-201ENSMUST00000158141 123 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Gm23477-201ENSMUST00000158882 128 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Gm23339-201ENSMUST00000158962 139 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Mir3064-201ENSMUST00000175532 67 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Gm44396-201ENSMUST00000199843 114 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Gm43907-201ENSMUST00000203128 117 ntBASIC1.48□□□□□ -2.17
Msx2Q03358 Gm22556-201ENSMUST00000157803 100 ntBASIC1.47□□□□□ -2.17
Msx2Q03358 Gm25366-201ENSMUST00000158845 124 ntBASIC1.47□□□□□ -2.17
Msx2Q03358 Mir1933-201ENSMUST00000158930 88 ntBASIC1.47□□□□□ -2.17
Msx2Q03358 Gm44962-201ENSMUST00000206460 279 ntBASIC1.47□□□□□ -2.17
Msx2Q03358 Snora75-201ENSMUST00000082903 133 ntBASIC1.47□□□□□ -2.17
Msx2Q03358 Gm24983-201ENSMUST00000104457 69 ntBASIC1.46□□□□□ -2.18
Msx2Q03358 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.46□□□□□ -2.18
Msx2Q03358 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.46□□□□□ -2.18
Msx2Q03358 Mir3087-201ENSMUST00000199405 56 ntBASIC1.46□□□□□ -2.18
Msx2Q03358 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.46□□□□□ -2.18
Msx2Q03358 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Msx2Q03358 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Msx2Q03358 Gm11857-201ENSMUST00000119817 324 ntBASIC1.45□□□□□ -2.18
Msx2Q03358 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.45□□□□□ -2.18
Msx2Q03358 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.45□□□□□ -2.18
Msx2Q03358 Gm26922-201ENSMUST00000082687 72 ntBASIC1.45□□□□□ -2.18
Msx2Q03358 Mir126a-201ENSMUST00000083606 73 ntBASIC1.45□□□□□ -2.18
Msx2Q03358 Mir301b-201ENSMUST00000102333 97 ntBASIC1.44□□□□□ -2.18
Msx2Q03358 Gm22786-201ENSMUST00000104086 122 ntBASIC1.44□□□□□ -2.18
Msx2Q03358 Gm23114-201ENSMUST00000158478 117 ntBASIC1.44□□□□□ -2.18
Msx2Q03358 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Msx2Q03358 Gm24311-201ENSMUST00000082570 104 ntBASIC1.44□□□□□ -2.18
Msx2Q03358 Mir324-201ENSMUST00000083600 89 ntBASIC1.44□□□□□ -2.18
Msx2Q03358 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Msx2Q03358 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.44□□□□□ -2.18
Msx2Q03358 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.43□□□□□ -2.18
Msx2Q03358 Gm23558-201ENSMUST00000157823 80 ntBASIC1.43□□□□□ -2.18
Msx2Q03358 Gm18433-201ENSMUST00000192747 197 ntBASIC1.43□□□□□ -2.18
Msx2Q03358 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.43□□□□□ -2.18
Msx2Q03358 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.43□□□□□ -2.18
Msx2Q03358 Gm43944-201ENSMUST00000205220 120 ntBASIC1.43□□□□□ -2.18
Msx2Q03358 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Msx2Q03358 Gm24134-201ENSMUST00000083361 71 ntBASIC1.43□□□□□ -2.18
Msx2Q03358 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Msx2Q03358 Gm23991-201ENSMUST00000117033 93 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Gm23221-201ENSMUST00000158118 93 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Gm22541-201ENSMUST00000158165 127 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Gm24076-201ENSMUST00000158179 94 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Gm22203-201ENSMUST00000158605 58 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Gm24638-201ENSMUST00000179807 132 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Mir6352-201ENSMUST00000184495 116 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Gm23301-201ENSMUST00000082713 65 ntBASIC1.42□□□□□ -2.18
Msx2Q03358 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Msx2Q03358 Gm23130-201ENSMUST00000104252 74 ntBASIC1.41□□□□□ -2.18
Msx2Q03358 Gm26274-201ENSMUST00000157103 321 ntBASIC1.41□□□□□ -2.18
Msx2Q03358 Gm22406-201ENSMUST00000174923 93 ntBASIC1.41□□□□□ -2.18
Msx2Q03358 Gm23714-201ENSMUST00000179259 105 ntBASIC1.41□□□□□ -2.18
Msx2Q03358 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
Msx2Q03358 Gm27420-201ENSMUST00000183823 79 ntBASIC1.41□□□□□ -2.18
Msx2Q03358 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Msx2Q03358 Gm25759-201ENSMUST00000103988 129 ntBASIC1.4□□□□□ -2.19
Msx2Q03358 Snord69-201ENSMUST00000104024 80 ntBASIC1.4□□□□□ -2.19
Msx2Q03358 Gm22100-201ENSMUST00000157926 63 ntBASIC1.4□□□□□ -2.19
Msx2Q03358 Traj60-201ENSMUST00000167781 54 ntBASIC1.4□□□□□ -2.19
Msx2Q03358 Gm22761-201ENSMUST00000102278 96 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Gm24396-201ENSMUST00000116905 93 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Gm24073-201ENSMUST00000158177 106 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Gm22466-201ENSMUST00000175278 69 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Gm23267-201ENSMUST00000178490 132 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Gm26224-201ENSMUST00000082506 80 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Mir320-201ENSMUST00000083594 82 ntBASIC1.39□□□□□ -2.19
Msx2Q03358 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Msx2Q03358 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
Msx2Q03358 Mir741-201ENSMUST00000103931 71 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 Gm25416-201ENSMUST00000104221 107 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 Gm24331-201ENSMUST00000175099 67 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 Gm24154-201ENSMUST00000175261 130 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 Gm23801-201ENSMUST00000175561 67 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 Gm24485-201ENSMUST00000178283 67 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.38□□□□□ -2.19
Msx2Q03358 Mir377-201ENSMUST00000083504 68 ntBASIC1.38□□□□□ -2.19
Msx2Q03358 Gm23500-201ENSMUST00000157735 98 ntBASIC1.37□□□□□ -2.19
Msx2Q03358 Snord2-201ENSMUST00000157899 69 ntBASIC1.37□□□□□ -2.19
Msx2Q03358 Gm25552-201ENSMUST00000158081 91 ntBASIC1.37□□□□□ -2.19
Msx2Q03358 Gm27549-201ENSMUST00000183508 62 ntBASIC1.37□□□□□ -2.19
Msx2Q03358 Gm27493-201ENSMUST00000184128 78 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 215.3 ms