Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm24073-201ENSMUST00000158177 106 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 Gm23065-201ENSMUST00000158236 130 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 Mir3089-201ENSMUST00000175350 84 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 Gm45688-201ENSMUST00000210002 101 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 Gm25899-201ENSMUST00000082672 141 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 Gm25894-201ENSMUST00000083458 75 ntBASIC0.39□□□□□ -2.35
Col2a1P28481 Gm24468-201ENSMUST00000104489 104 ntBASIC0.38□□□□□ -2.35
Col2a1P28481 Gm22381-201ENSMUST00000158186 107 ntBASIC0.38□□□□□ -2.35
Col2a1P28481 Gm29535-201ENSMUST00000185723 109 ntBASIC0.38□□□□□ -2.35
Col2a1P28481 Gm28143-201ENSMUST00000191082 109 ntBASIC0.38□□□□□ -2.35
Col2a1P28481 Mir377-201ENSMUST00000083504 68 ntBASIC0.38□□□□□ -2.35
Col2a1P28481 Gm25378-201ENSMUST00000104333 129 ntBASIC0.37□□□□□ -2.35
Col2a1P28481 Gm23203-201ENSMUST00000104374 107 ntBASIC0.37□□□□□ -2.35
Col2a1P28481 Gm24605-201ENSMUST00000104772 96 ntBASIC0.37□□□□□ -2.35
Col2a1P28481 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Col2a1P28481 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.37□□□□□ -2.35
Col2a1P28481 Gm22503-201ENSMUST00000158983 115 ntBASIC0.36□□□□□ -2.35
Col2a1P28481 Gm22070-201ENSMUST00000178475 107 ntBASIC0.36□□□□□ -2.35
Col2a1P28481 Snora75-201ENSMUST00000082903 133 ntBASIC0.36□□□□□ -2.35
Col2a1P28481 Mir369-201ENSMUST00000083627 79 ntBASIC0.36□□□□□ -2.35
Col2a1P28481 Gm24009-201ENSMUST00000157734 93 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm23036-201ENSMUST00000157885 99 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm22520-201ENSMUST00000158269 129 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Mir7010-201ENSMUST00000183464 63 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm24527-201ENSMUST00000082920 107 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Snord78-201ENSMUST00000104032 66 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm25108-201ENSMUST00000122473 78 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm26152-201ENSMUST00000157427 101 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm25370-201ENSMUST00000158159 94 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Mir1949-202ENSMUST00000199259 70 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Col2a1P28481 Gm25635-201ENSMUST00000082675 131 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm23138-201ENSMUST00000083365 103 ntBASIC0.35□□□□□ -2.35
Col2a1P28481 Gm24686-201ENSMUST00000157755 93 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Gm26484-201ENSMUST00000158018 106 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Gm24321-201ENSMUST00000175348 80 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Mir376b-201ENSMUST00000195930 82 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Mir7229-201ENSMUST00000197062 53 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Gm43977-201ENSMUST00000203970 189 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Snord80-201ENSMUST00000083801 81 ntBASIC0.34□□□□□ -2.36
Col2a1P28481 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm23654-201ENSMUST00000116758 126 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm24894-201ENSMUST00000122744 118 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm22541-201ENSMUST00000158165 127 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm24129-201ENSMUST00000158537 97 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm25974-201ENSMUST00000158701 94 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm42844-201ENSMUST00000200355 112 ntBASIC0.33□□□□□ -2.36
Col2a1P28481 Gm23601-201ENSMUST00000157259 131 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm25393-201ENSMUST00000157336 285 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm22788-201ENSMUST00000157876 61 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm22089-201ENSMUST00000158336 102 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm24926-201ENSMUST00000178053 79 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm22632-201ENSMUST00000178266 79 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm26712-201ENSMUST00000180813 217 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm27297-201ENSMUST00000183395 105 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm38295-201ENSMUST00000191951 151 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm44457-201ENSMUST00000198109 76 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm22509-201ENSMUST00000082775 107 ntBASIC0.32□□□□□ -2.36
Col2a1P28481 Gm13065-201ENSMUST00000119178 141 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Gm24399-201ENSMUST00000157869 74 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Gm24903-201ENSMUST00000158131 126 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Gm24947-201ENSMUST00000158334 110 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Gm42845-201ENSMUST00000197766 105 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Gm24148-201ENSMUST00000082762 80 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Gm26456-201ENSMUST00000082831 111 ntBASIC0.31□□□□□ -2.36
Col2a1P28481 Mir466m-201ENSMUST00000175052 84 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 Gm45541-201ENSMUST00000210443 54 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 Gm26062-201ENSMUST00000083379 107 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 Gm25629-201ENSMUST00000084001 107 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 Mir466-201ENSMUST00000093591 73 ntBASIC0.3□□□□□ -2.36
Col2a1P28481 Gm22490-201ENSMUST00000157188 119 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm22522-201ENSMUST00000158271 151 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm25014-201ENSMUST00000158401 103 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Mir200a-201ENSMUST00000083466 90 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm25684-201ENSMUST00000083941 107 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Mir216b-201ENSMUST00000102363 86 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm24233-201ENSMUST00000104317 122 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm24648-201ENSMUST00000157111 132 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm23900-201ENSMUST00000157569 108 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm25978-201ENSMUST00000158698 90 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm25646-201ENSMUST00000178527 79 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm25618-201ENSMUST00000179484 107 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.29□□□□□ -2.36
Col2a1P28481 Gm24705-201ENSMUST00000082808 107 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm22828-201ENSMUST00000083768 107 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 Gm23344-201ENSMUST00000083818 68 ntBASIC0.29□□□□□ -2.36
Col2a1P28481 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.28□□□□□ -2.36
Col2a1P28481 Gm25772-201ENSMUST00000158574 56 ntBASIC0.28□□□□□ -2.37
Col2a1P28481 Gm22239-201ENSMUST00000175220 103 ntBASIC0.28□□□□□ -2.37
Col2a1P28481 Gm37796-201ENSMUST00000195327 134 ntBASIC0.28□□□□□ -2.37
Col2a1P28481 Gm26202-201ENSMUST00000082910 65 ntBASIC0.28□□□□□ -2.37
Col2a1P28481 Gm22652-201ENSMUST00000083207 131 ntBASIC0.28□□□□□ -2.37
Col2a1P28481 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.28□□□□□ -2.37
Col2a1P28481 Gm22757-201ENSMUST00000102279 96 ntBASIC0.27□□□□□ -2.37
Col2a1P28481 Gm25040-201ENSMUST00000103877 66 ntBASIC0.27□□□□□ -2.37
Col2a1P28481 Gm26133-201ENSMUST00000157363 100 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 227.3 ms