Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23072-201ENSMUST00000158243 123 ntBASIC1,6□□□□□ -2,15
Hoxd3P09027 Mir6406-201ENSMUST00000183592 120 ntBASIC1,6□□□□□ -2,15
Hoxd3P09027 Gm43512-201ENSMUST00000198495 176 ntBASIC1,6□□□□□ -2,15
Hoxd3P09027 Gm23301-201ENSMUST00000082713 65 ntBASIC1,6□□□□□ -2,15
Hoxd3P09027 Gm24151-201ENSMUST00000082758 141 ntBASIC1,6□□□□□ -2,15
Hoxd3P09027 Mir15b-201ENSMUST00000083646 64 ntBASIC1,6□□□□□ -2,15
Hoxd3P09027 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1,6□□□□□ -2,15
Hoxd3P09027 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1,59□□□□□ -2,15
Hoxd3P09027 Mir876-201ENSMUST00000104659 81 ntBASIC1,59□□□□□ -2,15
Hoxd3P09027 Gm23672-201ENSMUST00000157471 107 ntBASIC1,59□□□□□ -2,15
Hoxd3P09027 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1,59□□□□□ -2,15
Hoxd3P09027 Gm26139-201ENSMUST00000180098 107 ntBASIC1,59□□□□□ -2,15
Hoxd3P09027 Gm45655-201ENSMUST00000211625 160 ntBASIC1,59□□□□□ -2,15
Hoxd3P09027 n-R5s159-201ENSMUST00000122681 120 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 Gm22541-201ENSMUST00000158165 127 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 Gm23339-201ENSMUST00000158962 139 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 Gm27554-201ENSMUST00000185074 98 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 Mir8090-201ENSMUST00000185078 136 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 Gm29432-201ENSMUST00000185397 139 ntBASIC1,58□□□□□ -2,16
Hoxd3P09027 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1,58□□□□□ -2,16
Hoxd3P09027 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1,57□□□□□ -2,16
Hoxd3P09027 Gm25416-201ENSMUST00000104221 107 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 Gm23048-201ENSMUST00000157237 129 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 Gm24725-201ENSMUST00000158229 125 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 Mir7016-201ENSMUST00000184308 72 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 Gm27443-201ENSMUST00000184660 98 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 AC211878.4-201ENSMUST00000220970 262 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 Mir324-201ENSMUST00000083600 89 ntBASIC1,57□□□□□ -2,16
Hoxd3P09027 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1,56□□□□□ -2,16
Hoxd3P09027 Gm22785-201ENSMUST00000104087 132 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 Gm23130-201ENSMUST00000104252 74 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 U6.1-201ENSMUST00000157443 101 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 Gm22164-201ENSMUST00000158413 106 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 Gm23342-201ENSMUST00000158958 115 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 Mir7026-201ENSMUST00000184384 67 ntBASIC1,56□□□□□ -2,16
Hoxd3P09027 Gm22466-201ENSMUST00000175278 69 ntBASIC1,55□□□□□ -2,16
Hoxd3P09027 Mir6342-201ENSMUST00000183870 125 ntBASIC1,55□□□□□ -2,16
Hoxd3P09027 Mir6901-201ENSMUST00000185062 62 ntBASIC1,55□□□□□ -2,16
Hoxd3P09027 AL928567.1-201ENSMUST00000197891 138 ntBASIC1,55□□□□□ -2,16
Hoxd3P09027 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,55□□□□□ -2,16
Hoxd3P09027 Gm24624-201ENSMUST00000082617 164 ntBASIC1,55□□□□□ -2,16
Hoxd3P09027 Mir487b-201ENSMUST00000102265 82 ntBASIC1,54□□□□□ -2,16
Hoxd3P09027 Gm25068-201ENSMUST00000103895 110 ntBASIC1,54□□□□□ -2,16
Hoxd3P09027 Gm22727-201ENSMUST00000158090 116 ntBASIC1,54□□□□□ -2,16
Hoxd3P09027 Mir376b-201ENSMUST00000195930 82 ntBASIC1,54□□□□□ -2,16
Hoxd3P09027 Gm44384-201ENSMUST00000200208 114 ntBASIC1,54□□□□□ -2,16
Hoxd3P09027 Mir377-201ENSMUST00000083504 68 ntBASIC1,54□□□□□ -2,16
Hoxd3P09027 Mir758-201ENSMUST00000103260 81 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Gm25040-201ENSMUST00000103877 66 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Gm22087-201ENSMUST00000158339 88 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Gm24549-201ENSMUST00000158647 139 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Gm24177-201ENSMUST00000158927 131 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Gm27511-201ENSMUST00000183502 127 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Gm27977-201ENSMUST00000185159 111 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Mir30d-201ENSMUST00000083503 82 ntBASIC1,53□□□□□ -2,16
Hoxd3P09027 Snord69-201ENSMUST00000104024 80 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Mir669n-201ENSMUST00000158636 54 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Mir100-201ENSMUST00000175270 80 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Mir7673-201ENSMUST00000184567 64 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Mir7017-201ENSMUST00000184894 62 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 CT030170.1-201ENSMUST00000222183 148 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Gm25186-201ENSMUST00000083909 108 ntBASIC1,52□□□□□ -2,17
Hoxd3P09027 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1,51□□□□□ -2,17
Hoxd3P09027 Gm25460-201ENSMUST00000157954 127 ntBASIC1,51□□□□□ -2,17
Hoxd3P09027 Gm37778-201ENSMUST00000191732 190 ntBASIC1,51□□□□□ -2,17
Hoxd3P09027 AC144671.1-201ENSMUST00000215265 99 ntBASIC1,51□□□□□ -2,17
Hoxd3P09027 Gm22494-201ENSMUST00000104495 128 ntBASIC1,5□□□□□ -2,17
Hoxd3P09027 Gm23109-201ENSMUST00000116867 126 ntBASIC1,5□□□□□ -2,17
Hoxd3P09027 Gm25641-201ENSMUST00000175135 108 ntBASIC1,5□□□□□ -2,17
Hoxd3P09027 Gm25936-201ENSMUST00000179952 114 ntBASIC1,5□□□□□ -2,17
Hoxd3P09027 Gm26274-201ENSMUST00000157103 321 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Gm22099-201ENSMUST00000157925 123 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Gm23813-201ENSMUST00000175153 77 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Gm25648-201ENSMUST00000177844 79 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Gm27265-201ENSMUST00000183559 77 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Mir3569-201ENSMUST00000185080 58 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Snord96a-201ENSMUST00000082791 81 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Gm24612-201ENSMUST00000083267 107 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Mir30a-201ENSMUST00000083471 71 ntBASIC1,49□□□□□ -2,17
Hoxd3P09027 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,49□□□□□ -2,17
Hoxd3P09027 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1,49□□□□□ -2,17
Hoxd3P09027 Gm23012-201ENSMUST00000104149 83 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 Gm23010-201ENSMUST00000104151 126 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 Gm23670-201ENSMUST00000157469 119 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 Gm27937-201ENSMUST00000183605 88 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 AC129085.5-201ENSMUST00000225468 400 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 Gm26922-201ENSMUST00000082687 72 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 Mir92-2-201ENSMUST00000083679 91 ntBASIC1,48□□□□□ -2,17
Hoxd3P09027 Gm25968-201ENSMUST00000157167 100 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Gm24478-201ENSMUST00000157439 158 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Gm25836-201ENSMUST00000158918 123 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Mir3098-201ENSMUST00000175416 87 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Mir7225-201ENSMUST00000184178 54 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Mir7678-201ENSMUST00000185076 71 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Gm23730-201ENSMUST00000083236 107 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Gm22723-201ENSMUST00000083820 129 ntBASIC1,47□□□□□ -2,17
Hoxd3P09027 Mir873a-201ENSMUST00000104863 77 ntBASIC1,46□□□□□ -2,18
Retrieved 100 of 76,532 protein–RNA pairs in 142,9 ms