Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm23783-201ENSMUST00000157941 102 ntBASIC0.67□□□□□ -2.3
Cldn4O35054 Gm23065-201ENSMUST00000158236 130 ntBASIC0.67□□□□□ -2.3
Cldn4O35054 Gm25815-201ENSMUST00000082755 107 ntBASIC0.67□□□□□ -2.3
Cldn4O35054 Gm24258-201ENSMUST00000083739 133 ntBASIC0.67□□□□□ -2.3
Cldn4O35054 Gm23482-201ENSMUST00000104172 122 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm26421-201ENSMUST00000104279 132 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm6985-201ENSMUST00000121255 271 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Cldn4O35054 Gm16265-201ENSMUST00000134558 108 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm26133-201ENSMUST00000157363 100 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm24399-201ENSMUST00000157869 74 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Mir100-201ENSMUST00000175270 80 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm25693-201ENSMUST00000175443 85 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm27297-201ENSMUST00000183395 105 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Mir6364-201ENSMUST00000183396 86 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Mir216a-201ENSMUST00000083605 72 ntBASIC0.66□□□□□ -2.3
Cldn4O35054 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
Cldn4O35054 Mir216b-201ENSMUST00000102363 86 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm23661-201ENSMUST00000122630 87 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm24290-201ENSMUST00000157634 96 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm25014-201ENSMUST00000158401 103 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm23416-201ENSMUST00000175520 95 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm26456-201ENSMUST00000082831 111 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm26062-201ENSMUST00000083379 107 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Snord33-201ENSMUST00000083694 84 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm23344-201ENSMUST00000083818 68 ntBASIC0.65□□□□□ -2.31
Cldn4O35054 Gm25040-201ENSMUST00000103877 66 ntBASIC0.64□□□□□ -2.31
Cldn4O35054 Gm23203-201ENSMUST00000104374 107 ntBASIC0.64□□□□□ -2.31
Cldn4O35054 Gm24009-201ENSMUST00000157734 93 ntBASIC0.64□□□□□ -2.31
Cldn4O35054 Gm28435-201ENSMUST00000185496 108 ntBASIC0.64□□□□□ -2.31
Cldn4O35054 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.64□□□□□ -2.31
Cldn4O35054 Gm22004-201ENSMUST00000101884 107 ntBASIC0.63□□□□□ -2.31
Cldn4O35054 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.63□□□□□ -2.31
Cldn4O35054 Gm22520-201ENSMUST00000158269 129 ntBASIC0.63□□□□□ -2.31
Cldn4O35054 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.63□□□□□ -2.31
Cldn4O35054 Mir7010-201ENSMUST00000183464 63 ntBASIC0.63□□□□□ -2.31
Cldn4O35054 Gm24445-201ENSMUST00000083981 107 ntBASIC0.63□□□□□ -2.31
Cldn4O35054 Gm14884-201ENSMUST00000120456 196 ntBASIC0.62□□□□□ -2.31
Cldn4O35054 Gm22340-201ENSMUST00000157717 114 ntBASIC0.62□□□□□ -2.31
Cldn4O35054 Gm24877-201ENSMUST00000158779 116 ntBASIC0.62□□□□□ -2.31
Cldn4O35054 Mir1949-202ENSMUST00000199259 70 ntBASIC0.62□□□□□ -2.31
Cldn4O35054 Gm24208-201ENSMUST00000082783 135 ntBASIC0.62□□□□□ -2.31
Cldn4O35054 Gm26236-201ENSMUST00000175536 137 ntBASIC0.61□□□□□ -2.31
Cldn4O35054 Gm29535-201ENSMUST00000185723 109 ntBASIC0.61□□□□□ -2.31
Cldn4O35054 Gm28143-201ENSMUST00000191082 109 ntBASIC0.61□□□□□ -2.31
Cldn4O35054 Gm44481-201ENSMUST00000197288 84 ntBASIC0.61□□□□□ -2.31
Cldn4O35054 Gm44339-201ENSMUST00000200598 84 ntBASIC0.61□□□□□ -2.31
Cldn4O35054 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
Cldn4O35054 Gm26081-201ENSMUST00000104068 132 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 Gm25879-201ENSMUST00000104330 107 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 Gm24555-201ENSMUST00000104548 124 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 Gm26285-201ENSMUST00000177923 107 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 Gm45197-201ENSMUST00000205288 151 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 Gm23622-201ENSMUST00000082460 107 ntBASIC0.6□□□□□ -2.31
Cldn4O35054 Gm25378-201ENSMUST00000104333 129 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm24482-201ENSMUST00000117005 93 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm22706-201ENSMUST00000157907 112 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm25380-201ENSMUST00000175463 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm24641-201ENSMUST00000178055 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm25484-201ENSMUST00000178217 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm26138-201ENSMUST00000179236 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm22821-201ENSMUST00000179288 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Mir6342-201ENSMUST00000183870 125 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm23298-201ENSMUST00000083181 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm24614-201ENSMUST00000083269 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm22057-201ENSMUST00000083387 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm25516-201ENSMUST00000083857 107 ntBASIC0.59□□□□□ -2.31
Cldn4O35054 Gm23644-201ENSMUST00000157856 77 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm25300-201ENSMUST00000175284 84 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm27289-201ENSMUST00000183341 82 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm38295-201ENSMUST00000191951 151 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Mir376b-201ENSMUST00000195930 82 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm25635-201ENSMUST00000082675 131 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm25337-201ENSMUST00000083723 104 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.58□□□□□ -2.32
Cldn4O35054 Gm13065-201ENSMUST00000119178 141 ntBASIC0.57□□□□□ -2.32
Cldn4O35054 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.57□□□□□ -2.32
Cldn4O35054 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.57□□□□□ -2.32
Cldn4O35054 Snora75-201ENSMUST00000082903 133 ntBASIC0.57□□□□□ -2.32
Cldn4O35054 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.57□□□□□ -2.32
Cldn4O35054 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Cldn4O35054 Gm24233-201ENSMUST00000104317 122 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Gm22788-201ENSMUST00000157876 61 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Gm22212-201ENSMUST00000158096 106 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Gm24801-201ENSMUST00000178503 105 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Gm43927-201ENSMUST00000204599 117 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Gm26109-201ENSMUST00000083970 70 ntBASIC0.56□□□□□ -2.32
Cldn4O35054 Gm23708-201ENSMUST00000104367 123 ntBASIC0.55□□□□□ -2.32
Cldn4O35054 Gm24648-201ENSMUST00000157111 132 ntBASIC0.55□□□□□ -2.32
Cldn4O35054 Gm22213-201ENSMUST00000157564 119 ntBASIC0.55□□□□□ -2.32
Cldn4O35054 Gm24686-201ENSMUST00000157755 93 ntBASIC0.55□□□□□ -2.32
Cldn4O35054 Gm27717-201ENSMUST00000183933 151 ntBASIC0.55□□□□□ -2.32
Cldn4O35054 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.55□□□□□ -2.32
Cldn4O35054 Gm25393-201ENSMUST00000157336 285 ntBASIC0.54□□□□□ -2.32
Cldn4O35054 Gm24772-201ENSMUST00000158507 110 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms