Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm23301-201ENSMUST00000082713 65 ntBASIC1.26□□□□□ -2.21
Pcdh1F7BJK1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Gm25542-201ENSMUST00000116889 94 ntBASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Mir1187-201ENSMUST00000116936 122 ntBASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Gm25740-201ENSMUST00000180247 107 ntBASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Gm38323-201ENSMUST00000192450 210 ntBASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Pcdh1F7BJK1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm22788-201ENSMUST00000157876 61 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm22541-201ENSMUST00000158165 127 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm24549-201ENSMUST00000158647 139 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm27987-201ENSMUST00000184023 93 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Mir30a-201ENSMUST00000083471 71 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Mir500-201ENSMUST00000093600 92 ntBASIC1.24□□□□□ -2.21
Pcdh1F7BJK1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.23□□□□□ -2.21
Pcdh1F7BJK1 Gm23291-201ENSMUST00000175611 78 ntBASIC1.23□□□□□ -2.21
Pcdh1F7BJK1 Gm43038-201ENSMUST00000202359 88 ntBASIC1.23□□□□□ -2.21
Pcdh1F7BJK1 Gm25854-201ENSMUST00000082792 72 ntBASIC1.23□□□□□ -2.21
Pcdh1F7BJK1 Gm22786-201ENSMUST00000104086 122 ntBASIC1.22□□□□□ -2.21
Pcdh1F7BJK1 Gm27326-201ENSMUST00000183504 95 ntBASIC1.22□□□□□ -2.21
Pcdh1F7BJK1 Gm28435-201ENSMUST00000185496 108 ntBASIC1.22□□□□□ -2.21
Pcdh1F7BJK1 Gm29047-201ENSMUST00000189816 108 ntBASIC1.22□□□□□ -2.21
Pcdh1F7BJK1 Gm24311-201ENSMUST00000082570 104 ntBASIC1.22□□□□□ -2.21
Pcdh1F7BJK1 Gm24379-201ENSMUST00000122695 86 ntBASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Gm24199-201ENSMUST00000157808 136 ntBASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Gm24902-201ENSMUST00000158126 123 ntBASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Mir377-201ENSMUST00000083504 68 ntBASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Pcdh1F7BJK1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm24868-201ENSMUST00000157265 136 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm22233-201ENSMUST00000157464 114 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm24077-201ENSMUST00000158183 136 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm25868-201ENSMUST00000158253 114 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm27415-201ENSMUST00000183720 95 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm24202-201ENSMUST00000082948 103 ntBASIC1.2□□□□□ -2.22
Pcdh1F7BJK1 Gm23991-201ENSMUST00000117033 93 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Gm6272-201ENSMUST00000121256 171 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Gm24064-201ENSMUST00000157486 106 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Gm22522-201ENSMUST00000158271 151 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Gm43907-201ENSMUST00000203128 117 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Gm25798-201ENSMUST00000082641 107 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Gm26207-201ENSMUST00000082909 104 ntBASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Pcdh1F7BJK1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Gm23060-201ENSMUST00000102345 109 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Gm25831-201ENSMUST00000158924 163 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Mir100-201ENSMUST00000175270 80 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Gm25128-201ENSMUST00000083339 76 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.18□□□□□ -2.22
Pcdh1F7BJK1 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 Gm25366-201ENSMUST00000158845 124 ntBASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 Snora75-201ENSMUST00000082903 133 ntBASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 Mir34c-201ENSMUST00000083653 77 ntBASIC1.17□□□□□ -2.22
Pcdh1F7BJK1 Gm25040-201ENSMUST00000103877 66 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 Gm25417-201ENSMUST00000104212 131 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 Gm22539-201ENSMUST00000158167 117 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 Gm24500-201ENSMUST00000158447 124 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 Mir3079-201ENSMUST00000175428 90 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 Gm25870-201ENSMUST00000179845 79 ntBASIC1.16□□□□□ -2.22
Pcdh1F7BJK1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Gm25622-201ENSMUST00000157217 104 ntBASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Gm24073-201ENSMUST00000158177 106 ntBASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Mir6342-201ENSMUST00000183870 125 ntBASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Gm23293-201ENSMUST00000082552 104 ntBASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Gm23056-201ENSMUST00000082803 111 ntBASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Pcdh1F7BJK1 Gm25416-201ENSMUST00000104221 107 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Gm24983-201ENSMUST00000104457 69 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Gm42533-201ENSMUST00000196247 157 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.14□□□□□ -2.23
Pcdh1F7BJK1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Gm24988-201ENSMUST00000104460 121 ntBASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Gm23853-201ENSMUST00000158375 104 ntBASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Gm26363-201ENSMUST00000158866 83 ntBASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Mir376b-201ENSMUST00000195930 82 ntBASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Mir211-201ENSMUST00000083651 106 ntBASIC1.13□□□□□ -2.23
Pcdh1F7BJK1 Gm23989-201ENSMUST00000117030 66 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 183.3 ms