Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm27934-201ENSMUST00000158795 63 ntBASIC-2.78□□□□□ -2.85
Trav4-3A0A0B4J1K1 Gm27792-201ENSMUST00000184031 115 ntBASIC-2.78□□□□□ -2.85
Trav4-3A0A0B4J1K1 Gm38268-201ENSMUST00000195813 193 ntBASIC-2.78□□□□□ -2.85
Trav4-3A0A0B4J1K1 Gm22055-201ENSMUST00000083388 107 ntBASIC-2.78□□□□□ -2.85
Trav4-3A0A0B4J1K1 Gm23344-201ENSMUST00000083818 68 ntBASIC-2.78□□□□□ -2.85
Trav4-3A0A0B4J1K1 Mir463-201ENSMUST00000093570 75 ntBASIC-2.78□□□□□ -2.85
Trav4-3A0A0B4J1K1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-2.79□□□□□ -2.86
Trav4-3A0A0B4J1K1 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm23909-201ENSMUST00000104598 131 ntBASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm22165-201ENSMUST00000158414 103 ntBASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm24501-201ENSMUST00000158452 62 ntBASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-2.8□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm23219-201ENSMUST00000158123 87 ntBASIC-2.81□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm22841-201ENSMUST00000158443 62 ntBASIC-2.81□□□□□ -2.86
Trav4-3A0A0B4J1K1 AC153646.2-201ENSMUST00000220516 109 ntBASIC-2.81□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm25929-201ENSMUST00000082784 107 ntBASIC-2.81□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm24316-201ENSMUST00000083041 107 ntBASIC-2.81□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm23955-201ENSMUST00000157214 100 ntBASIC-2.82□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm24438-201ENSMUST00000157893 115 ntBASIC-2.82□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm23080-201ENSMUST00000157846 103 ntBASIC-2.83□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm27585-201ENSMUST00000183717 199 ntBASIC-2.83□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm44858-201ENSMUST00000207360 154 ntBASIC-2.83□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm25937-201ENSMUST00000083912 107 ntBASIC-2.83□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm44395-201ENSMUST00000197056 153 ntBASIC-2.84□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm23412-201ENSMUST00000083017 107 ntBASIC-2.84□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm25512-201ENSMUST00000083863 107 ntBASIC-2.84□□□□□ -2.86
Trav4-3A0A0B4J1K1 Gm44489-201ENSMUST00000104619 97 ntBASIC-2.85□□□□□ -2.87
Trav4-3A0A0B4J1K1 Cfap61-214ENSMUST00000167179 183 ntBASIC-2.85□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm24810-201ENSMUST00000175317 70 ntBASIC-2.85□□□□□ -2.87
Trav4-3A0A0B4J1K1 Mir7673-201ENSMUST00000184567 64 ntBASIC-2.85□□□□□ -2.87
Trav4-3A0A0B4J1K1 Mir146-201ENSMUST00000083667 65 ntBASIC-2.85□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.86□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm25680-201ENSMUST00000116917 126 ntBASIC-2.87□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm22635-201ENSMUST00000116962 126 ntBASIC-2.87□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm22479-201ENSMUST00000122566 81 ntBASIC-2.87□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm25749-201ENSMUST00000175485 111 ntBASIC-2.87□□□□□ -2.87
Trav4-3A0A0B4J1K1 Mir384-201ENSMUST00000083565 88 ntBASIC-2.87□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm24762-201ENSMUST00000083689 104 ntBASIC-2.87□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm25991-201ENSMUST00000102439 99 ntBASIC-2.88□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm22708-201ENSMUST00000158987 103 ntBASIC-2.88□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm27919-201ENSMUST00000185163 107 ntBASIC-2.88□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-2.89□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-2.89□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm22434-201ENSMUST00000158549 122 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm23793-201ENSMUST00000179396 117 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm27415-201ENSMUST00000183720 95 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm27798-201ENSMUST00000184989 71 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm26056-201ENSMUST00000083043 104 ntBASIC-2.9□□□□□ -2.87
Trav4-3A0A0B4J1K1 Gm23097-201ENSMUST00000083448 105 ntBASIC-2.91□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm11835-201ENSMUST00000120635 663 ntBASIC-2.92□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm23260-201ENSMUST00000158317 172 ntBASIC-2.92□□□□□ -2.88
Trav4-3A0A0B4J1K1 mt-Ta-201ENSMUST00000082398 69 ntBASIC-2.92□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm24070-201ENSMUST00000104519 130 ntBASIC-2.93□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm23351-201ENSMUST00000158427 125 ntBASIC-2.93□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm22459-201ENSMUST00000082577 108 ntBASIC-2.93□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm24423-201ENSMUST00000101982 106 ntBASIC-2.94□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm22148-201ENSMUST00000104445 107 ntBASIC-2.95□□□□□ -2.88
Trav4-3A0A0B4J1K1 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-2.95□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm14293-201ENSMUST00000118528 577 ntBASIC-2.95□□□□□ -2.88
Trav4-3A0A0B4J1K1 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-2.95□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm24697-201ENSMUST00000083881 107 ntBASIC-2.95□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm23173-201ENSMUST00000157161 160 ntBASIC-2.96□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-2.96□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm22828-201ENSMUST00000083768 107 ntBASIC-2.96□□□□□ -2.88
Trav4-3A0A0B4J1K1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-2.97□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.97□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm23240-201ENSMUST00000083009 121 ntBASIC-2.97□□□□□ -2.88
Trav4-3A0A0B4J1K1 Gm25827-201ENSMUST00000157089 107 ntBASIC-2.98□□□□□ -2.89
Trav4-3A0A0B4J1K1 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2.98□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm25793-201ENSMUST00000083287 107 ntBASIC-2.98□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm11420-201ENSMUST00000120047 402 ntBASIC-3□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm25229-201ENSMUST00000178587 79 ntBASIC-3□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm45655-201ENSMUST00000211625 160 ntBASIC-3□□□□□ -2.89
Trav4-3A0A0B4J1K1 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-3.01□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm22783-201ENSMUST00000104089 107 ntBASIC-3.01□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm22503-201ENSMUST00000158983 115 ntBASIC-3.01□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm27937-201ENSMUST00000183605 88 ntBASIC-3.01□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm43624-201ENSMUST00000197368 180 ntBASIC-3.01□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm23637-201ENSMUST00000175075 94 ntBASIC-3.03□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm24111-201ENSMUST00000175491 97 ntBASIC-3.03□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm25158-201ENSMUST00000177681 121 ntBASIC-3.03□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm26229-201ENSMUST00000179699 121 ntBASIC-3.03□□□□□ -2.89
Trav4-3A0A0B4J1K1 Gm25052-201ENSMUST00000122661 158 ntBASIC-3.04□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm23986-201ENSMUST00000157144 63 ntBASIC-3.04□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm25982-201ENSMUST00000157920 101 ntBASIC-3.04□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm22566-201ENSMUST00000175541 85 ntBASIC-3.04□□□□□ -2.9
Trav4-3A0A0B4J1K1 AL929265.1-201ENSMUST00000213427 125 ntBASIC-3.04□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm22885-201ENSMUST00000157410 107 ntBASIC-3.05□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm28020-201ENSMUST00000157739 67 ntBASIC-3.05□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm27549-201ENSMUST00000183508 62 ntBASIC-3.05□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm23303-201ENSMUST00000082714 152 ntBASIC-3.05□□□□□ -2.9
Trav4-3A0A0B4J1K1 Snord80-201ENSMUST00000083801 81 ntBASIC-3.05□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm22197-201ENSMUST00000116866 58 ntBASIC-3.06□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm26026-201ENSMUST00000122726 123 ntBASIC-3.07□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm26279-201ENSMUST00000157095 102 ntBASIC-3.07□□□□□ -2.9
Trav4-3A0A0B4J1K1 Gm25440-201ENSMUST00000158279 154 ntBASIC-3.07□□□□□ -2.9
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms