Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.29□□□□□ -2.2
Col13a1Q9R1N9 Gm22469-201ENSMUST00000104118 133 ntBASIC1.28□□□□□ -2.2
Col13a1Q9R1N9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.28□□□□□ -2.2
Col13a1Q9R1N9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.28□□□□□ -2.2
Col13a1Q9R1N9 Gm22950-201ENSMUST00000082776 107 ntBASIC1.28□□□□□ -2.2
Col13a1Q9R1N9 Gm25629-201ENSMUST00000084001 107 ntBASIC1.28□□□□□ -2.2
Col13a1Q9R1N9 Gm23130-201ENSMUST00000104252 74 ntBASIC1.27□□□□□ -2.21
Col13a1Q9R1N9 Gm12469-201ENSMUST00000117623 207 ntBASIC1.27□□□□□ -2.21
Col13a1Q9R1N9 Gm22729-201ENSMUST00000158088 129 ntBASIC1.27□□□□□ -2.21
Col13a1Q9R1N9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.27□□□□□ -2.21
Col13a1Q9R1N9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.27□□□□□ -2.21
Col13a1Q9R1N9 Mir6390-201ENSMUST00000184405 129 ntBASIC1.27□□□□□ -2.21
Col13a1Q9R1N9 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm26104-201ENSMUST00000157250 108 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm24476-201ENSMUST00000157437 131 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm24547-201ENSMUST00000158649 149 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm27419-201ENSMUST00000184576 109 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm43944-201ENSMUST00000205220 120 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.26□□□□□ -2.21
Col13a1Q9R1N9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm23652-201ENSMUST00000116752 107 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm11694-201ENSMUST00000118637 159 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm23261-201ENSMUST00000158316 136 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm23349-201ENSMUST00000158432 98 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm24801-201ENSMUST00000178503 105 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Mir6237-201ENSMUST00000183808 91 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm29535-201ENSMUST00000185723 109 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm28143-201ENSMUST00000191082 109 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm44602-201ENSMUST00000205948 132 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col13a1Q9R1N9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm22672-201ENSMUST00000104414 134 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm24399-201ENSMUST00000157869 74 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm24808-201ENSMUST00000157993 118 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm25449-201ENSMUST00000179389 79 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm36956-201ENSMUST00000193830 214 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm44483-201ENSMUST00000197203 97 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm44469-201ENSMUST00000198558 79 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm25635-201ENSMUST00000082675 131 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm22753-201ENSMUST00000083657 107 ntBASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col13a1Q9R1N9 Gm25014-201ENSMUST00000158401 103 ntBASIC1.23□□□□□ -2.21
Col13a1Q9R1N9 Gm10548-202ENSMUST00000165672 272 ntBASIC1.23□□□□□ -2.21
Col13a1Q9R1N9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.23□□□□□ -2.21
Col13a1Q9R1N9 Gm23482-201ENSMUST00000104172 122 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm25787-201ENSMUST00000104709 92 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm23900-201ENSMUST00000157569 108 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm23857-201ENSMUST00000158379 111 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Mir1933-201ENSMUST00000158930 88 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Mir5619-201ENSMUST00000176065 61 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm44488-201ENSMUST00000199467 119 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm45197-201ENSMUST00000205288 151 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm25851-201ENSMUST00000082794 107 ntBASIC1.22□□□□□ -2.21
Col13a1Q9R1N9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Gm22544-201ENSMUST00000104349 127 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Gm26133-201ENSMUST00000157363 100 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Col13a1Q9R1N9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Col13a1Q9R1N9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.2□□□□□ -2.22
Col13a1Q9R1N9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.2□□□□□ -2.22
Col13a1Q9R1N9 Gm27993-201ENSMUST00000184362 85 ntBASIC1.2□□□□□ -2.22
Col13a1Q9R1N9 Gm43206-201ENSMUST00000197990 114 ntBASIC1.2□□□□□ -2.22
Col13a1Q9R1N9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Col13a1Q9R1N9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Gm24129-201ENSMUST00000158537 97 ntBASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Snord50a-201ENSMUST00000178154 72 ntBASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Gm24463-201ENSMUST00000178417 72 ntBASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Gm22354-201ENSMUST00000083919 70 ntBASIC1.19□□□□□ -2.22
Col13a1Q9R1N9 Gm24271-201ENSMUST00000102327 111 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm25600-201ENSMUST00000158357 106 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm26158-201ENSMUST00000158973 119 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm22454-201ENSMUST00000082583 107 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Mir30a-201ENSMUST00000083471 71 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.18□□□□□ -2.22
Col13a1Q9R1N9 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.17□□□□□ -2.22
Col13a1Q9R1N9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Col13a1Q9R1N9 Gm26425-201ENSMUST00000122529 82 ntBASIC1.17□□□□□ -2.22
Col13a1Q9R1N9 Gm23661-201ENSMUST00000122630 87 ntBASIC1.17□□□□□ -2.22
Col13a1Q9R1N9 Gm25056-201ENSMUST00000157372 62 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 200.7 ms