Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm24290-201ENSMUST00000157634 96 ntBASIC1.71□□□□□ -2.14
Trim39Q9ESN2 Gm26089-201ENSMUST00000157898 107 ntBASIC1.71□□□□□ -2.14
Trim39Q9ESN2 Gm22164-201ENSMUST00000158413 106 ntBASIC1.71□□□□□ -2.14
Trim39Q9ESN2 Gm22095-201ENSMUST00000158984 150 ntBASIC1.71□□□□□ -2.14
Trim39Q9ESN2 Gm22264-201ENSMUST00000178200 107 ntBASIC1.71□□□□□ -2.14
Trim39Q9ESN2 Gm25622-201ENSMUST00000157217 104 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Gm22227-201ENSMUST00000157356 259 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Gm23826-201ENSMUST00000157394 119 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Gm24478-201ENSMUST00000157439 158 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Gm44396-201ENSMUST00000199843 114 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Gm43927-201ENSMUST00000204599 117 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Mir322-201ENSMUST00000083484 95 ntBASIC1.7□□□□□ -2.14
Trim39Q9ESN2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Gm22082-201ENSMUST00000157587 161 ntBASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Gm23114-201ENSMUST00000158478 117 ntBASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Gm24547-201ENSMUST00000158649 149 ntBASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Gm26499-201ENSMUST00000178544 79 ntBASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Gm26096-201ENSMUST00000179084 79 ntBASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Mir6901-201ENSMUST00000185062 62 ntBASIC1.69□□□□□ -2.14
Trim39Q9ESN2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Gm25847-201ENSMUST00000116793 96 ntBASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Gm22788-201ENSMUST00000157876 61 ntBASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Gm24918-201ENSMUST00000083022 130 ntBASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim39Q9ESN2 Gm22030-201ENSMUST00000116942 63 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Gm3788-201ENSMUST00000119949 136 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Mir6997-201ENSMUST00000184313 71 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Gm45654-201ENSMUST00000210980 123 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Gm24202-201ENSMUST00000082948 103 ntBASIC1.67□□□□□ -2.14
Trim39Q9ESN2 Gm23291-201ENSMUST00000175611 78 ntBASIC1.66□□□□□ -2.14
Trim39Q9ESN2 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.66□□□□□ -2.14
Trim39Q9ESN2 Gm23301-201ENSMUST00000082713 65 ntBASIC1.66□□□□□ -2.14
Trim39Q9ESN2 Gm24208-201ENSMUST00000082783 135 ntBASIC1.66□□□□□ -2.14
Trim39Q9ESN2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.66□□□□□ -2.14
Trim39Q9ESN2 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trim39Q9ESN2 Gm23130-201ENSMUST00000104252 74 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Mir1933-201ENSMUST00000158930 88 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Mir7678-201ENSMUST00000185076 71 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Gm27959-201ENSMUST00000185172 111 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Gm37778-201ENSMUST00000191732 190 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Gm20305-201ENSMUST00000193226 177 ntBASIC1.65□□□□□ -2.15
Trim39Q9ESN2 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trim39Q9ESN2 Gm25964-201ENSMUST00000157171 97 ntBASIC1.64□□□□□ -2.15
Trim39Q9ESN2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.64□□□□□ -2.15
Trim39Q9ESN2 Gm22099-201ENSMUST00000157925 123 ntBASIC1.64□□□□□ -2.15
Trim39Q9ESN2 Gm25991-201ENSMUST00000102439 99 ntBASIC1.63□□□□□ -2.15
Trim39Q9ESN2 Gm24222-201ENSMUST00000158834 93 ntBASIC1.63□□□□□ -2.15
Trim39Q9ESN2 Gm25366-201ENSMUST00000158845 124 ntBASIC1.63□□□□□ -2.15
Trim39Q9ESN2 Gm23306-201ENSMUST00000179058 105 ntBASIC1.63□□□□□ -2.15
Trim39Q9ESN2 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.63□□□□□ -2.15
Trim39Q9ESN2 Mir216b-201ENSMUST00000102363 86 ntBASIC1.62□□□□□ -2.15
Trim39Q9ESN2 Gm25354-201ENSMUST00000179110 105 ntBASIC1.62□□□□□ -2.15
Trim39Q9ESN2 Gm43907-201ENSMUST00000203128 117 ntBASIC1.62□□□□□ -2.15
Trim39Q9ESN2 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Gm23726-201ENSMUST00000178937 67 ntBASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Gm27420-201ENSMUST00000183823 79 ntBASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Mir7226-201ENSMUST00000184953 60 ntBASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.61□□□□□ -2.15
Trim39Q9ESN2 Gm25609-201ENSMUST00000104019 104 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Gm6985-201ENSMUST00000121255 271 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Gm22466-201ENSMUST00000175278 69 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Mir7050-201ENSMUST00000184636 60 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Gm26224-201ENSMUST00000082506 80 ntBASIC1.6□□□□□ -2.15
Trim39Q9ESN2 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 Gm23785-201ENSMUST00000116741 96 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 Gm25619-201ENSMUST00000122621 104 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 Gm24073-201ENSMUST00000158177 106 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 Mir30a-201ENSMUST00000083471 71 ntBASIC1.59□□□□□ -2.15
Trim39Q9ESN2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Trim39Q9ESN2 Gm23109-201ENSMUST00000116867 126 ntBASIC1.58□□□□□ -2.16
Trim39Q9ESN2 Gm26274-201ENSMUST00000157103 321 ntBASIC1.58□□□□□ -2.16
Trim39Q9ESN2 Gm22541-201ENSMUST00000158165 127 ntBASIC1.58□□□□□ -2.16
Trim39Q9ESN2 Gm26029-201ENSMUST00000158659 132 ntBASIC1.58□□□□□ -2.16
Trim39Q9ESN2 Mir653-201ENSMUST00000102402 85 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Gm24378-201ENSMUST00000122699 106 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Gm22100-201ENSMUST00000157926 63 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Gm26485-201ENSMUST00000158019 64 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Mir669n-201ENSMUST00000158636 54 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Gm24549-201ENSMUST00000158647 139 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Gm24221-201ENSMUST00000158833 313 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Gm26359-201ENSMUST00000158873 101 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Snora75-201ENSMUST00000082903 133 ntBASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trim39Q9ESN2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Gm23950-201ENSMUST00000104026 129 ntBASIC1.56□□□□□ -2.16
Trim39Q9ESN2 Gm23991-201ENSMUST00000117033 93 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 143.3 ms