Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm22541-201ENSMUST00000158165 127 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Gm25166-201ENSMUST00000158909 111 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Mir6342-201ENSMUST00000183870 125 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Gm28383-201ENSMUST00000187563 139 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Snord32a-201ENSMUST00000083285 83 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Gm23244-201ENSMUST00000083375 92 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Gm24099-201ENSMUST00000083384 107 ntBASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC0,89□□□□□ -2,27
Sec61bQ9CQS8 Gm25393-201ENSMUST00000157336 285 ntBASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 Gm22770-201ENSMUST00000158368 67 ntBASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 Gm27297-201ENSMUST00000183395 105 ntBASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 Gm18433-201ENSMUST00000192747 197 ntBASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 mt-Tc-201ENSMUST00000082400 66 ntBASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0,88□□□□□ -2,27
Sec61bQ9CQS8 Gm23989-201ENSMUST00000117030 66 ntBASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 Gm24902-201ENSMUST00000158126 123 ntBASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 Gm22386-201ENSMUST00000158192 129 ntBASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 AC132833.2-201ENSMUST00000228699 157 ntBASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 mt-Tn-201ENSMUST00000082399 71 ntBASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 Snord35a-201ENSMUST00000083884 90 ntBASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0,87□□□□□ -2,27
Sec61bQ9CQS8 Gm43960-201ENSMUST00000204249 5020 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 Gm26080-201ENSMUST00000104069 131 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 Gm24686-201ENSMUST00000157755 93 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 Gm22212-201ENSMUST00000158096 106 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 Gm27326-201ENSMUST00000183504 95 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 AL772271.1-201ENSMUST00000196848 65 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 DQ267101-201ENSMUST00000082562 73 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 Mir33-201ENSMUST00000083531 69 ntBASIC0,86□□□□□ -2,27
Sec61bQ9CQS8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0,85□□□□□ -2,27
Sec61bQ9CQS8 Gm24650-201ENSMUST00000157105 103 ntBASIC0,85□□□□□ -2,27
Sec61bQ9CQS8 Scarna3b-201ENSMUST00000157533 139 ntBASIC0,85□□□□□ -2,27
Sec61bQ9CQS8 Gm28794-201ENSMUST00000185276 136 ntBASIC0,85□□□□□ -2,27
Sec61bQ9CQS8 Gm38295-201ENSMUST00000191951 151 ntBASIC0,85□□□□□ -2,27
Sec61bQ9CQS8 Mir6962-201ENSMUST00000199512 63 ntBASIC0,85□□□□□ -2,27
Sec61bQ9CQS8 Mir695-201ENSMUST00000102261 109 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 Gm16265-201ENSMUST00000134558 108 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 Gm25831-201ENSMUST00000158924 163 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 Mir6240-201ENSMUST00000184281 117 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 Gm29535-201ENSMUST00000185723 109 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 Gm28143-201ENSMUST00000191082 109 ntBASIC0,84□□□□□ -2,27
Sec61bQ9CQS8 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0,84□□□□□ -2,28
Sec61bQ9CQS8 Mir216b-201ENSMUST00000102363 86 ntBASIC0,83□□□□□ -2,28
Sec61bQ9CQS8 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0,83□□□□□ -2,28
Sec61bQ9CQS8 Gm23967-201ENSMUST00000175062 78 ntBASIC0,83□□□□□ -2,28
Sec61bQ9CQS8 Gm43911-201ENSMUST00000203097 76 ntBASIC0,83□□□□□ -2,28
Sec61bQ9CQS8 Gm26082-201ENSMUST00000104070 127 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 Gm24648-201ENSMUST00000157111 132 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 Gm26181-201ENSMUST00000157687 106 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 Gm23893-201ENSMUST00000158106 134 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 Gm28435-201ENSMUST00000185496 108 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 AL928567.1-201ENSMUST00000197891 138 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 Snora75-201ENSMUST00000082903 133 ntBASIC0,82□□□□□ -2,28
Sec61bQ9CQS8 Gm22672-201ENSMUST00000104414 134 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm15115-201ENSMUST00000121145 264 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 n-R5s6-201ENSMUST00000122663 88 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm25289-201ENSMUST00000122799 119 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm23122-201ENSMUST00000157645 103 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm22788-201ENSMUST00000157876 61 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm22520-201ENSMUST00000158269 129 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm23261-201ENSMUST00000158316 136 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Mir3083-201ENSMUST00000175377 64 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm24801-201ENSMUST00000178503 105 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm23714-201ENSMUST00000179259 105 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm24020-201ENSMUST00000180156 108 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm27248-201ENSMUST00000184004 166 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm44962-201ENSMUST00000206460 279 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Mir101a-201ENSMUST00000083517 83 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Mir320-201ENSMUST00000083594 82 ntBASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0,81□□□□□ -2,28
Sec61bQ9CQS8 Gm25040-201ENSMUST00000103877 66 ntBASIC0,8□□□□□ -2,28
Sec61bQ9CQS8 Gm22149-201ENSMUST00000104442 136 ntBASIC0,8□□□□□ -2,28
Sec61bQ9CQS8 Gm24073-201ENSMUST00000158177 106 ntBASIC0,8□□□□□ -2,28
Sec61bQ9CQS8 Gm25300-201ENSMUST00000175284 84 ntBASIC0,8□□□□□ -2,28
Sec61bQ9CQS8 Mir8119-201ENSMUST00000183371 129 ntBASIC0,8□□□□□ -2,28
Sec61bQ9CQS8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0,8□□□□□ -2,28
Sec61bQ9CQS8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Gm23766-201ENSMUST00000103894 80 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Gm23329-201ENSMUST00000157415 108 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Gm24678-201ENSMUST00000158756 104 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Gm26712-201ENSMUST00000180813 217 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Mir8116-201ENSMUST00000184134 97 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Mir7665-201ENSMUST00000184907 63 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Mir376b-201ENSMUST00000195930 82 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Mir1949-202ENSMUST00000199259 70 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Gm23790-201ENSMUST00000083013 107 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Mir29a-201ENSMUST00000083676 88 ntBASIC0,79□□□□□ -2,28
Sec61bQ9CQS8 Gm45265-201ENSMUST00000210852 2497 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Gm26338-201ENSMUST00000102372 110 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Gm23991-201ENSMUST00000117033 93 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Gm23558-201ENSMUST00000157823 80 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Mir7010-201ENSMUST00000183464 63 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Gm24208-201ENSMUST00000082783 135 ntBASIC0,78□□□□□ -2,28
Sec61bQ9CQS8 Mir343-201ENSMUST00000102360 75 ntBASIC0,77□□□□□ -2,29
Sec61bQ9CQS8 Gm13065-201ENSMUST00000119178 141 ntBASIC0,77□□□□□ -2,29
Retrieved 100 of 76,532 protein–RNA pairs in 107,2 ms