Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.51□□□□□ -2.17
Nkx6-1Q99MA9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.51□□□□□ -2.17
Nkx6-1Q99MA9 Gm44469-201ENSMUST00000198558 79 ntBASIC1.51□□□□□ -2.17
Nkx6-1Q99MA9 Gm45197-201ENSMUST00000205288 151 ntBASIC1.51□□□□□ -2.17
Nkx6-1Q99MA9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 Gm23130-201ENSMUST00000104252 74 ntBASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 Gm26425-201ENSMUST00000122529 82 ntBASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 Gm26133-201ENSMUST00000157363 100 ntBASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 Gm23369-201ENSMUST00000175406 105 ntBASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.5□□□□□ -2.17
Nkx6-1Q99MA9 Gm24547-201ENSMUST00000158649 149 ntBASIC1.49□□□□□ -2.17
Nkx6-1Q99MA9 Gm23917-201ENSMUST00000175256 98 ntBASIC1.49□□□□□ -2.17
Nkx6-1Q99MA9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Nkx6-1Q99MA9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.49□□□□□ -2.17
Nkx6-1Q99MA9 Gm22753-201ENSMUST00000083657 107 ntBASIC1.49□□□□□ -2.17
Nkx6-1Q99MA9 Gm23482-201ENSMUST00000104172 122 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Gm10548-202ENSMUST00000165672 272 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Traj60-201ENSMUST00000167781 54 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Gm24154-201ENSMUST00000175261 130 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Gm36956-201ENSMUST00000193830 214 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Gm43944-201ENSMUST00000205220 120 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.48□□□□□ -2.17
Nkx6-1Q99MA9 Mir343-201ENSMUST00000102360 75 ntBASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Gm25112-201ENSMUST00000122680 104 ntBASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Gm24476-201ENSMUST00000157437 131 ntBASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Gm23857-201ENSMUST00000158379 111 ntBASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Gm44488-201ENSMUST00000199467 119 ntBASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Nkx6-1Q99MA9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.46□□□□□ -2.18
Nkx6-1Q99MA9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.46□□□□□ -2.18
Nkx6-1Q99MA9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.46□□□□□ -2.18
Nkx6-1Q99MA9 Gm22827-201ENSMUST00000083766 107 ntBASIC1.46□□□□□ -2.18
Nkx6-1Q99MA9 Gm22544-201ENSMUST00000104349 127 ntBASIC1.45□□□□□ -2.18
Nkx6-1Q99MA9 Mir1933-201ENSMUST00000158930 88 ntBASIC1.45□□□□□ -2.18
Nkx6-1Q99MA9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.45□□□□□ -2.18
Nkx6-1Q99MA9 Gm27993-201ENSMUST00000184362 85 ntBASIC1.45□□□□□ -2.18
Nkx6-1Q99MA9 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.45□□□□□ -2.18
Nkx6-1Q99MA9 Gm22679-201ENSMUST00000116975 100 ntBASIC1.44□□□□□ -2.18
Nkx6-1Q99MA9 Gm24129-201ENSMUST00000158537 97 ntBASIC1.44□□□□□ -2.18
Nkx6-1Q99MA9 Gm22140-201ENSMUST00000158745 120 ntBASIC1.44□□□□□ -2.18
Nkx6-1Q99MA9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.44□□□□□ -2.18
Nkx6-1Q99MA9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.44□□□□□ -2.18
Nkx6-1Q99MA9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.44□□□□□ -2.18
Nkx6-1Q99MA9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm23661-201ENSMUST00000122630 87 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm24808-201ENSMUST00000157993 118 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm25600-201ENSMUST00000158357 106 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm26158-201ENSMUST00000158973 119 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Gm27686-201ENSMUST00000185123 91 ntBASIC1.43□□□□□ -2.18
Nkx6-1Q99MA9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Gm25056-201ENSMUST00000157372 62 ntBASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Gm24686-201ENSMUST00000157755 93 ntBASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.42□□□□□ -2.18
Nkx6-1Q99MA9 Snord71-201ENSMUST00000104361 85 ntBASIC1.41□□□□□ -2.18
Nkx6-1Q99MA9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.41□□□□□ -2.18
Nkx6-1Q99MA9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
Nkx6-1Q99MA9 Gm20108-201ENSMUST00000219977 153 ntBASIC1.41□□□□□ -2.18
Nkx6-1Q99MA9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Nkx6-1Q99MA9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm24271-201ENSMUST00000102327 111 ntBASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm24009-201ENSMUST00000157734 93 ntBASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm25693-201ENSMUST00000175443 85 ntBASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm26202-201ENSMUST00000082910 65 ntBASIC1.4□□□□□ -2.19
Nkx6-1Q99MA9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm24648-201ENSMUST00000157111 132 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm24290-201ENSMUST00000157634 96 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm26089-201ENSMUST00000157898 107 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm24637-201ENSMUST00000158674 85 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm25229-201ENSMUST00000178587 79 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm27297-201ENSMUST00000183395 105 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm26441-201ENSMUST00000082590 104 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm23301-201ENSMUST00000082713 65 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Gm24527-201ENSMUST00000082920 107 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Mir30a-201ENSMUST00000083471 71 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.39□□□□□ -2.19
Nkx6-1Q99MA9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Nkx6-1Q99MA9 Gm22515-201ENSMUST00000158273 305 ntBASIC1.38□□□□□ -2.19
Nkx6-1Q99MA9 Gm22466-201ENSMUST00000175278 69 ntBASIC1.38□□□□□ -2.19
Nkx6-1Q99MA9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.38□□□□□ -2.19
Nkx6-1Q99MA9 Gm27639-201ENSMUST00000184937 85 ntBASIC1.38□□□□□ -2.19
Nkx6-1Q99MA9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Nkx6-1Q99MA9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
Nkx6-1Q99MA9 Gm24288-201ENSMUST00000157630 144 ntBASIC1.37□□□□□ -2.19
Nkx6-1Q99MA9 Gm22605-201ENSMUST00000158289 108 ntBASIC1.37□□□□□ -2.19
Nkx6-1Q99MA9 Gm25974-201ENSMUST00000158701 94 ntBASIC1.37□□□□□ -2.19
Nkx6-1Q99MA9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 131.3 ms