Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm24676-201ENSMUST00000158758 75 ntBASIC0.4□□□□□ -2.35
Chmp1b1Q99LU0 Gm26498-201ENSMUST00000177799 79 ntBASIC0.4□□□□□ -2.35
Chmp1b1Q99LU0 Gm26230-201ENSMUST00000180141 79 ntBASIC0.4□□□□□ -2.35
Chmp1b1Q99LU0 Gm43324-201ENSMUST00000197482 289 ntBASIC0.4□□□□□ -2.35
Chmp1b1Q99LU0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
Chmp1b1Q99LU0 Gm10813-201ENSMUST00000099936 90 ntBASIC0.4□□□□□ -2.35
Chmp1b1Q99LU0 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm25040-201ENSMUST00000103877 66 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm25496-201ENSMUST00000104430 120 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm22031-201ENSMUST00000116945 126 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm12086-201ENSMUST00000120863 228 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm24321-201ENSMUST00000175348 80 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Mir7229-201ENSMUST00000197062 53 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Snora75-201ENSMUST00000082903 133 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm23678-201ENSMUST00000083157 107 ntBASIC0.39□□□□□ -2.35
Chmp1b1Q99LU0 Gm22558-201ENSMUST00000157326 95 ntBASIC0.38□□□□□ -2.35
Chmp1b1Q99LU0 Gm24009-201ENSMUST00000157734 93 ntBASIC0.38□□□□□ -2.35
Chmp1b1Q99LU0 Gm45197-201ENSMUST00000205288 151 ntBASIC0.38□□□□□ -2.35
Chmp1b1Q99LU0 Gm45541-201ENSMUST00000210443 54 ntBASIC0.38□□□□□ -2.35
Chmp1b1Q99LU0 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.38□□□□□ -2.35
Chmp1b1Q99LU0 Gm22759-201ENSMUST00000102276 96 ntBASIC0.37□□□□□ -2.35
Chmp1b1Q99LU0 Gm23126-201ENSMUST00000104260 134 ntBASIC0.37□□□□□ -2.35
Chmp1b1Q99LU0 Gm23434-201ENSMUST00000157179 100 ntBASIC0.37□□□□□ -2.35
Chmp1b1Q99LU0 Gm24399-201ENSMUST00000157869 74 ntBASIC0.37□□□□□ -2.35
Chmp1b1Q99LU0 Gm44457-201ENSMUST00000198109 76 ntBASIC0.37□□□□□ -2.35
Chmp1b1Q99LU0 Gm25416-201ENSMUST00000104221 107 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm25370-201ENSMUST00000158159 94 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm27851-201ENSMUST00000183529 63 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm28270-201ENSMUST00000188550 109 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm28328-201ENSMUST00000188869 109 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Snord80-201ENSMUST00000083801 81 ntBASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Chmp1b1Q99LU0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 Gm23060-201ENSMUST00000102345 109 ntBASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 Gm24233-201ENSMUST00000104317 122 ntBASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 Gm23601-201ENSMUST00000157259 131 ntBASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 Gm22239-201ENSMUST00000175220 103 ntBASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 Gm25635-201ENSMUST00000082675 131 ntBASIC0.35□□□□□ -2.35
Chmp1b1Q99LU0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.34□□□□□ -2.36
Chmp1b1Q99LU0 Gm24073-201ENSMUST00000158177 106 ntBASIC0.34□□□□□ -2.36
Chmp1b1Q99LU0 Gm23384-201ENSMUST00000158593 103 ntBASIC0.34□□□□□ -2.36
Chmp1b1Q99LU0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.34□□□□□ -2.36
Chmp1b1Q99LU0 Gm13065-201ENSMUST00000119178 141 ntBASIC0.33□□□□□ -2.36
Chmp1b1Q99LU0 Gm25056-201ENSMUST00000157372 62 ntBASIC0.33□□□□□ -2.36
Chmp1b1Q99LU0 Mir3105-201ENSMUST00000175480 85 ntBASIC0.33□□□□□ -2.36
Chmp1b1Q99LU0 Gm27297-201ENSMUST00000183395 105 ntBASIC0.33□□□□□ -2.36
Chmp1b1Q99LU0 Mir200a-201ENSMUST00000083466 90 ntBASIC0.33□□□□□ -2.36
Chmp1b1Q99LU0 Gm25006-201ENSMUST00000083813 107 ntBASIC0.33□□□□□ -2.36
Chmp1b1Q99LU0 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.32□□□□□ -2.36
Chmp1b1Q99LU0 Gm22319-201ENSMUST00000157147 122 ntBASIC0.32□□□□□ -2.36
Chmp1b1Q99LU0 Gm22983-201ENSMUST00000158308 104 ntBASIC0.32□□□□□ -2.36
Chmp1b1Q99LU0 Mir376b-201ENSMUST00000195930 82 ntBASIC0.32□□□□□ -2.36
Chmp1b1Q99LU0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.32□□□□□ -2.36
Chmp1b1Q99LU0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.32□□□□□ -2.36
Chmp1b1Q99LU0 Gm23986-201ENSMUST00000157144 63 ntBASIC0.31□□□□□ -2.36
Chmp1b1Q99LU0 Gm24686-201ENSMUST00000157755 93 ntBASIC0.31□□□□□ -2.36
Chmp1b1Q99LU0 Gm23044-201ENSMUST00000157891 100 ntBASIC0.31□□□□□ -2.36
Chmp1b1Q99LU0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.31□□□□□ -2.36
Chmp1b1Q99LU0 Gm24947-201ENSMUST00000158334 110 ntBASIC0.31□□□□□ -2.36
Chmp1b1Q99LU0 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.31□□□□□ -2.36
Chmp1b1Q99LU0 Gm25425-201ENSMUST00000157611 96 ntBASIC0.3□□□□□ -2.36
Chmp1b1Q99LU0 Gm22503-201ENSMUST00000158983 115 ntBASIC0.3□□□□□ -2.36
Chmp1b1Q99LU0 Mir7079-201ENSMUST00000184697 69 ntBASIC0.3□□□□□ -2.36
Chmp1b1Q99LU0 Gm24208-201ENSMUST00000082783 135 ntBASIC0.3□□□□□ -2.36
Chmp1b1Q99LU0 Gm25629-201ENSMUST00000084001 107 ntBASIC0.3□□□□□ -2.36
Chmp1b1Q99LU0 Gm23654-201ENSMUST00000116758 126 ntBASIC0.29□□□□□ -2.36
Chmp1b1Q99LU0 Gm22788-201ENSMUST00000157876 61 ntBASIC0.29□□□□□ -2.36
Chmp1b1Q99LU0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.29□□□□□ -2.36
Chmp1b1Q99LU0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.29□□□□□ -2.36
Chmp1b1Q99LU0 Gm45429-201ENSMUST00000209527 172 ntBASIC0.29□□□□□ -2.36
Chmp1b1Q99LU0 Mir670-201ENSMUST00000102380 100 ntBASIC0.28□□□□□ -2.36
Chmp1b1Q99LU0 Gm24278-201ENSMUST00000104239 127 ntBASIC0.28□□□□□ -2.36
Chmp1b1Q99LU0 Gm23708-201ENSMUST00000104367 123 ntBASIC0.28□□□□□ -2.36
Chmp1b1Q99LU0 Gm25887-201ENSMUST00000157777 84 ntBASIC0.28□□□□□ -2.36
Chmp1b1Q99LU0 Gm42845-201ENSMUST00000197766 105 ntBASIC0.28□□□□□ -2.36
Chmp1b1Q99LU0 Gm24468-201ENSMUST00000104489 104 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm23900-201ENSMUST00000157569 108 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm25014-201ENSMUST00000158401 103 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm22431-201ENSMUST00000158545 107 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm26712-201ENSMUST00000180813 217 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm43977-201ENSMUST00000203970 189 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm22303-201ENSMUST00000082686 122 ntBASIC0.27□□□□□ -2.37
Chmp1b1Q99LU0 Gm25408-201ENSMUST00000104104 133 ntBASIC0.26□□□□□ -2.37
Chmp1b1Q99LU0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Chmp1b1Q99LU0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.26□□□□□ -2.37
Chmp1b1Q99LU0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.26□□□□□ -2.37
Chmp1b1Q99LU0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.26□□□□□ -2.37
Chmp1b1Q99LU0 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.26□□□□□ -2.37
Chmp1b1Q99LU0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.25□□□□□ -2.37
Chmp1b1Q99LU0 Gm25428-201ENSMUST00000157608 114 ntBASIC0.25□□□□□ -2.37
Chmp1b1Q99LU0 Gm25920-201ENSMUST00000158307 99 ntBASIC0.25□□□□□ -2.37
Chmp1b1Q99LU0 Gm24772-201ENSMUST00000158507 110 ntBASIC0.25□□□□□ -2.37
Chmp1b1Q99LU0 Gm23821-201ENSMUST00000158738 106 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 217.9 ms