Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm25618-201ENSMUST00000179484 107 ntBASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Mir7063-201ENSMUST00000184158 91 ntBASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Mir7052-201ENSMUST00000184821 65 ntBASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Snord60-201ENSMUST00000082834 78 ntBASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Gm26062-201ENSMUST00000083379 107 ntBASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,16□□□□□ -2,22
SfpqQ8VIJ6 Gm24588-201ENSMUST00000116696 83 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 Mir468-201ENSMUST00000197332 78 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 Gm44948-201ENSMUST00000209050 149 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 CT571266.1-201ENSMUST00000222859 153 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 mt-Tc-201ENSMUST00000082400 66 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 Gm23344-201ENSMUST00000083818 68 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 Gm25629-201ENSMUST00000084001 107 ntBASIC1,15□□□□□ -2,23
SfpqQ8VIJ6 Mir709-201ENSMUST00000102190 88 ntBASIC1,14□□□□□ -2,23
SfpqQ8VIJ6 Gm23652-201ENSMUST00000116752 107 ntBASIC1,14□□□□□ -2,23
SfpqQ8VIJ6 Gm23328-201ENSMUST00000157418 132 ntBASIC1,14□□□□□ -2,23
SfpqQ8VIJ6 Gm23349-201ENSMUST00000158432 98 ntBASIC1,14□□□□□ -2,23
SfpqQ8VIJ6 Gm23340-201ENSMUST00000158955 123 ntBASIC1,14□□□□□ -2,23
SfpqQ8VIJ6 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 n-R5s70-201ENSMUST00000122650 116 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm24808-201ENSMUST00000157993 118 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Mir1961-201ENSMUST00000158643 112 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm24547-201ENSMUST00000158649 149 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Mir6381-201ENSMUST00000183426 87 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm29535-201ENSMUST00000185723 109 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm28143-201ENSMUST00000191082 109 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm44458-201ENSMUST00000196594 143 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm42506-201ENSMUST00000202009 150 ntBASIC1,13□□□□□ -2,23
SfpqQ8VIJ6 Gm23881-201ENSMUST00000116872 66 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm14884-201ENSMUST00000120456 196 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm24288-201ENSMUST00000157630 144 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm22729-201ENSMUST00000158088 129 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm23369-201ENSMUST00000175406 105 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm22565-201ENSMUST00000175540 69 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm22801-201ENSMUST00000175624 84 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm27419-201ENSMUST00000184576 109 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm25899-201ENSMUST00000082672 141 ntBASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,12□□□□□ -2,23
SfpqQ8VIJ6 Gm22672-201ENSMUST00000104414 134 ntBASIC1,11□□□□□ -2,23
SfpqQ8VIJ6 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,11□□□□□ -2,23
SfpqQ8VIJ6 Mir3098-201ENSMUST00000175416 87 ntBASIC1,11□□□□□ -2,23
SfpqQ8VIJ6 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1,11□□□□□ -2,23
SfpqQ8VIJ6 Gm24624-201ENSMUST00000082617 164 ntBASIC1,11□□□□□ -2,23
SfpqQ8VIJ6 Mir324-201ENSMUST00000083600 89 ntBASIC1,11□□□□□ -2,23
SfpqQ8VIJ6 Gm22469-201ENSMUST00000104118 133 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm26051-201ENSMUST00000104642 93 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm23900-201ENSMUST00000157569 108 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm24777-201ENSMUST00000157644 107 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm23261-201ENSMUST00000158316 136 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm25014-201ENSMUST00000158401 103 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm25901-201ENSMUST00000158494 130 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Snord50a-201ENSMUST00000178154 72 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm24463-201ENSMUST00000178417 72 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm27420-201ENSMUST00000183823 79 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 AC122327.1-201ENSMUST00000220778 108 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm25851-201ENSMUST00000082794 107 ntBASIC1,1□□□□□ -2,23
SfpqQ8VIJ6 Gm25787-201ENSMUST00000104709 92 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm12469-201ENSMUST00000117623 207 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm26133-201ENSMUST00000157363 100 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm23817-201ENSMUST00000158449 104 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm23114-201ENSMUST00000158478 117 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm43206-201ENSMUST00000197990 114 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm44469-201ENSMUST00000198558 79 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 mt-Tn-201ENSMUST00000082399 71 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm22454-201ENSMUST00000082583 107 ntBASIC1,09□□□□□ -2,23
SfpqQ8VIJ6 Gm24476-201ENSMUST00000157437 131 ntBASIC1,08□□□□□ -2,24
SfpqQ8VIJ6 Gm25449-201ENSMUST00000179389 79 ntBASIC1,08□□□□□ -2,24
SfpqQ8VIJ6 n-R5s96-201ENSMUST00000082574 124 ntBASIC1,08□□□□□ -2,24
SfpqQ8VIJ6 Gm25110-201ENSMUST00000116684 121 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm25775-201ENSMUST00000116716 121 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm24795-201ENSMUST00000116737 121 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm25171-201ENSMUST00000116926 121 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm11694-201ENSMUST00000118637 159 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm26274-201ENSMUST00000157103 321 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm24129-201ENSMUST00000158537 97 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm26029-201ENSMUST00000158659 132 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm10548-202ENSMUST00000165672 272 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm36956-201ENSMUST00000193830 214 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm44396-201ENSMUST00000199843 114 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm22354-201ENSMUST00000083919 70 ntBASIC1,07□□□□□ -2,24
SfpqQ8VIJ6 Gm24271-201ENSMUST00000102327 111 ntBASIC1,06□□□□□ -2,24
SfpqQ8VIJ6 Gm26425-201ENSMUST00000122529 82 ntBASIC1,06□□□□□ -2,24
SfpqQ8VIJ6 Gm24399-201ENSMUST00000157869 74 ntBASIC1,06□□□□□ -2,24
SfpqQ8VIJ6 Mir6237-201ENSMUST00000183808 91 ntBASIC1,06□□□□□ -2,24
SfpqQ8VIJ6 Mir6380-201ENSMUST00000184334 81 ntBASIC1,06□□□□□ -2,24
SfpqQ8VIJ6 Mir22-201ENSMUST00000083595 95 ntBASIC1,06□□□□□ -2,24
SfpqQ8VIJ6 Mir1933-201ENSMUST00000158930 88 ntBASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Gm27993-201ENSMUST00000184362 85 ntBASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Mir6390-201ENSMUST00000184405 129 ntBASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Gm44602-201ENSMUST00000205948 132 ntBASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Gm26224-201ENSMUST00000082506 80 ntBASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Gm26202-201ENSMUST00000082910 65 ntBASIC1,05□□□□□ -2,24
SfpqQ8VIJ6 Gm24252-201ENSMUST00000083700 132 ntBASIC1,05□□□□□ -2,24
Retrieved 100 of 76,532 protein–RNA pairs in 134,1 ms