Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.32□□□□□ -2.2
Ndc1Q8VCB1 Gm24129-201ENSMUST00000158537 97 ntBASIC1.32□□□□□ -2.2
Ndc1Q8VCB1 Gm23917-201ENSMUST00000175256 98 ntBASIC1.32□□□□□ -2.2
Ndc1Q8VCB1 Snord50a-201ENSMUST00000178154 72 ntBASIC1.32□□□□□ -2.2
Ndc1Q8VCB1 Gm24463-201ENSMUST00000178417 72 ntBASIC1.32□□□□□ -2.2
Ndc1Q8VCB1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Ndc1Q8VCB1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.31□□□□□ -2.2
Ndc1Q8VCB1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Ndc1Q8VCB1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ndc1Q8VCB1 Gm23661-201ENSMUST00000122630 87 ntBASIC1.31□□□□□ -2.2
Ndc1Q8VCB1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.31□□□□□ -2.2
Ndc1Q8VCB1 Mir410-201ENSMUST00000083563 81 ntBASIC1.31□□□□□ -2.2
Ndc1Q8VCB1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 Gm25968-201ENSMUST00000157167 100 ntBASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 Gm25600-201ENSMUST00000158357 106 ntBASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 Gm26158-201ENSMUST00000158973 119 ntBASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 Gm27993-201ENSMUST00000184362 85 ntBASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 Gm26202-201ENSMUST00000082910 65 ntBASIC1.3□□□□□ -2.2
Ndc1Q8VCB1 Gm26274-201ENSMUST00000157103 321 ntBASIC1.29□□□□□ -2.2
Ndc1Q8VCB1 Gm43206-201ENSMUST00000197990 114 ntBASIC1.29□□□□□ -2.2
Ndc1Q8VCB1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Ndc1Q8VCB1 Gm22233-201ENSMUST00000157464 114 ntBASIC1.28□□□□□ -2.2
Ndc1Q8VCB1 Gm24686-201ENSMUST00000157755 93 ntBASIC1.28□□□□□ -2.2
Ndc1Q8VCB1 Gm25868-201ENSMUST00000158253 114 ntBASIC1.28□□□□□ -2.2
Ndc1Q8VCB1 Gm25974-201ENSMUST00000158701 94 ntBASIC1.28□□□□□ -2.2
Ndc1Q8VCB1 Mir3098-201ENSMUST00000175416 87 ntBASIC1.28□□□□□ -2.2
Ndc1Q8VCB1 Gm43944-201ENSMUST00000205220 120 ntBASIC1.28□□□□□ -2.2
Ndc1Q8VCB1 Gm24009-201ENSMUST00000157734 93 ntBASIC1.27□□□□□ -2.21
Ndc1Q8VCB1 Gm23369-201ENSMUST00000175406 105 ntBASIC1.27□□□□□ -2.21
Ndc1Q8VCB1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.27□□□□□ -2.21
Ndc1Q8VCB1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.27□□□□□ -2.21
Ndc1Q8VCB1 Gm24311-201ENSMUST00000082570 104 ntBASIC1.27□□□□□ -2.21
Ndc1Q8VCB1 Gm24271-201ENSMUST00000102327 111 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Snord69-201ENSMUST00000104024 80 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Gm26051-201ENSMUST00000104642 93 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Gm38323-201ENSMUST00000192450 210 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 Mir500-201ENSMUST00000093600 92 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.26□□□□□ -2.21
Ndc1Q8VCB1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.25□□□□□ -2.21
Ndc1Q8VCB1 Gm25693-201ENSMUST00000175443 85 ntBASIC1.25□□□□□ -2.21
Ndc1Q8VCB1 Gm38295-201ENSMUST00000191951 151 ntBASIC1.25□□□□□ -2.21
Ndc1Q8VCB1 Gm22827-201ENSMUST00000083766 107 ntBASIC1.25□□□□□ -2.21
Ndc1Q8VCB1 Mir343-201ENSMUST00000102360 75 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm22030-201ENSMUST00000116942 63 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm24290-201ENSMUST00000157634 96 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm26089-201ENSMUST00000157898 107 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm22515-201ENSMUST00000158273 305 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm22140-201ENSMUST00000158745 120 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm22466-201ENSMUST00000175278 69 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm27297-201ENSMUST00000183395 105 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ndc1Q8VCB1 Gm25633-201ENSMUST00000178565 107 ntBASIC1.23□□□□□ -2.21
Ndc1Q8VCB1 Gm22805-201ENSMUST00000082739 107 ntBASIC1.23□□□□□ -2.21
Ndc1Q8VCB1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.23□□□□□ -2.21
Ndc1Q8VCB1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.22□□□□□ -2.21
Ndc1Q8VCB1 Gm25056-201ENSMUST00000157372 62 ntBASIC1.22□□□□□ -2.21
Ndc1Q8VCB1 Gm24549-201ENSMUST00000158647 139 ntBASIC1.22□□□□□ -2.21
Ndc1Q8VCB1 Gm23301-201ENSMUST00000082713 65 ntBASIC1.22□□□□□ -2.21
Ndc1Q8VCB1 Mir30a-201ENSMUST00000083471 71 ntBASIC1.22□□□□□ -2.21
Ndc1Q8VCB1 Gm25681-201ENSMUST00000083938 106 ntBASIC1.22□□□□□ -2.21
Ndc1Q8VCB1 Gm22679-201ENSMUST00000116975 100 ntBASIC1.21□□□□□ -2.22
Ndc1Q8VCB1 Gm24648-201ENSMUST00000157111 132 ntBASIC1.21□□□□□ -2.22
Ndc1Q8VCB1 Gm24637-201ENSMUST00000158674 85 ntBASIC1.21□□□□□ -2.22
Ndc1Q8VCB1 Gm25128-201ENSMUST00000083339 76 ntBASIC1.21□□□□□ -2.22
Ndc1Q8VCB1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Ndc1Q8VCB1 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.2□□□□□ -2.22
Ndc1Q8VCB1 Gm26712-201ENSMUST00000180813 217 ntBASIC1.2□□□□□ -2.22
Ndc1Q8VCB1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.2□□□□□ -2.22
Ndc1Q8VCB1 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.2□□□□□ -2.22
Ndc1Q8VCB1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Mir216b-201ENSMUST00000102363 86 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm6272-201ENSMUST00000121256 171 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm22605-201ENSMUST00000158289 108 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Mir3079-201ENSMUST00000175428 90 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm25229-201ENSMUST00000178587 79 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm27686-201ENSMUST00000185123 91 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm20108-201ENSMUST00000219977 153 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Mir29a-201ENSMUST00000083676 88 ntBASIC1.19□□□□□ -2.22
Ndc1Q8VCB1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Gm25112-201ENSMUST00000122680 104 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Snord13-201ENSMUST00000157627 104 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Gm24500-201ENSMUST00000158447 124 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Gm27639-201ENSMUST00000184937 85 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Gm26441-201ENSMUST00000082590 104 ntBASIC1.18□□□□□ -2.22
Ndc1Q8VCB1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ndc1Q8VCB1 Gm23528-201ENSMUST00000104571 132 ntBASIC1.17□□□□□ -2.22
Ndc1Q8VCB1 Gm22677-201ENSMUST00000116977 108 ntBASIC1.17□□□□□ -2.22
Ndc1Q8VCB1 Gm24183-201ENSMUST00000122572 93 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 194.6 ms