Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Gm25851-201ENSMUST00000082794 107 ntBASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Snord80-201ENSMUST00000083801 81 ntBASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Gm25110-201ENSMUST00000116684 121 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm25775-201ENSMUST00000116716 121 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm24795-201ENSMUST00000116737 121 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm25171-201ENSMUST00000116926 121 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm22845-201ENSMUST00000157712 104 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm22503-201ENSMUST00000158983 115 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Mir7663-201ENSMUST00000183950 61 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Mir7091-201ENSMUST00000184075 79 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm22980-201ENSMUST00000082608 70 ntBASIC1.32□□□□□ -2.2
Ushbp1Q8R370 Gm25416-201ENSMUST00000104221 107 ntBASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm22340-201ENSMUST00000157717 114 ntBASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm25370-201ENSMUST00000158159 94 ntBASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm23065-201ENSMUST00000158236 130 ntBASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm22515-201ENSMUST00000158273 305 ntBASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm22089-201ENSMUST00000158336 102 ntBASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.31□□□□□ -2.2
Ushbp1Q8R370 Gm26253-201ENSMUST00000122493 103 ntBASIC1.29□□□□□ -2.2
Ushbp1Q8R370 Gm24650-201ENSMUST00000157105 103 ntBASIC1.29□□□□□ -2.2
Ushbp1Q8R370 Gm22074-201ENSMUST00000158595 113 ntBASIC1.29□□□□□ -2.2
Ushbp1Q8R370 Mir6390-201ENSMUST00000184405 129 ntBASIC1.29□□□□□ -2.2
Ushbp1Q8R370 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
Ushbp1Q8R370 Gm26089-201ENSMUST00000157898 107 ntBASIC1.28□□□□□ -2.2
Ushbp1Q8R370 Gm25901-201ENSMUST00000158494 130 ntBASIC1.28□□□□□ -2.2
Ushbp1Q8R370 Snord60-201ENSMUST00000082834 78 ntBASIC1.28□□□□□ -2.2
Ushbp1Q8R370 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.28□□□□□ -2.2
Ushbp1Q8R370 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ushbp1Q8R370 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Ushbp1Q8R370 Gm23881-201ENSMUST00000116872 66 ntBASIC1.27□□□□□ -2.21
Ushbp1Q8R370 Gm25166-201ENSMUST00000158909 111 ntBASIC1.27□□□□□ -2.21
Ushbp1Q8R370 Gm23244-201ENSMUST00000083375 92 ntBASIC1.27□□□□□ -2.21
Ushbp1Q8R370 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.27□□□□□ -2.21
Ushbp1Q8R370 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ushbp1Q8R370 Gm25506-201ENSMUST00000104339 70 ntBASIC1.26□□□□□ -2.21
Ushbp1Q8R370 Gm25393-201ENSMUST00000157336 285 ntBASIC1.26□□□□□ -2.21
Ushbp1Q8R370 Gm26363-201ENSMUST00000158866 83 ntBASIC1.26□□□□□ -2.21
Ushbp1Q8R370 Gm24311-201ENSMUST00000082570 104 ntBASIC1.26□□□□□ -2.21
Ushbp1Q8R370 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.26□□□□□ -2.21
Ushbp1Q8R370 Gm12469-201ENSMUST00000117623 207 ntBASIC1.25□□□□□ -2.21
Ushbp1Q8R370 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ushbp1Q8R370 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ushbp1Q8R370 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.24□□□□□ -2.21
Ushbp1Q8R370 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.24□□□□□ -2.21
Ushbp1Q8R370 Gm22706-201ENSMUST00000157907 112 ntBASIC1.24□□□□□ -2.21
Ushbp1Q8R370 Gm27419-201ENSMUST00000184576 109 ntBASIC1.24□□□□□ -2.21
Ushbp1Q8R370 Gm25899-201ENSMUST00000082672 141 ntBASIC1.24□□□□□ -2.21
Ushbp1Q8R370 Gm22753-201ENSMUST00000083657 107 ntBASIC1.24□□□□□ -2.21
Ushbp1Q8R370 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ushbp1Q8R370 Gm26274-201ENSMUST00000157103 321 ntBASIC1.23□□□□□ -2.21
Ushbp1Q8R370 Gm24476-201ENSMUST00000157437 131 ntBASIC1.23□□□□□ -2.21
Ushbp1Q8R370 Mir1933-201ENSMUST00000158930 88 ntBASIC1.23□□□□□ -2.21
Ushbp1Q8R370 Gm44488-201ENSMUST00000199467 119 ntBASIC1.23□□□□□ -2.21
Ushbp1Q8R370 Gm26109-201ENSMUST00000083970 70 ntBASIC1.23□□□□□ -2.21
Ushbp1Q8R370 Gm14884-201ENSMUST00000120456 196 ntBASIC1.22□□□□□ -2.21
Ushbp1Q8R370 Gm23893-201ENSMUST00000158106 134 ntBASIC1.22□□□□□ -2.21
Ushbp1Q8R370 Gm24547-201ENSMUST00000158649 149 ntBASIC1.22□□□□□ -2.21
Ushbp1Q8R370 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.22□□□□□ -2.21
Ushbp1Q8R370 Gm42533-201ENSMUST00000196247 157 ntBASIC1.22□□□□□ -2.21
Ushbp1Q8R370 Gm43944-201ENSMUST00000205220 120 ntBASIC1.22□□□□□ -2.21
Ushbp1Q8R370 Gm24099-201ENSMUST00000083384 107 ntBASIC1.22□□□□□ -2.21
Ushbp1Q8R370 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ushbp1Q8R370 Gm36956-201ENSMUST00000193830 214 ntBASIC1.21□□□□□ -2.22
Ushbp1Q8R370 Gm44602-201ENSMUST00000205948 132 ntBASIC1.21□□□□□ -2.22
Ushbp1Q8R370 Gm24579-201ENSMUST00000103964 144 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm16265-201ENSMUST00000134558 108 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm23857-201ENSMUST00000158379 111 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm25618-201ENSMUST00000179484 107 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Mir6381-201ENSMUST00000183426 87 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm44469-201ENSMUST00000198558 79 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm25337-201ENSMUST00000083723 104 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm23344-201ENSMUST00000083818 68 ntBASIC1.2□□□□□ -2.22
Ushbp1Q8R370 Gm23126-201ENSMUST00000104260 134 ntBASIC1.19□□□□□ -2.22
Ushbp1Q8R370 Gm11694-201ENSMUST00000118637 159 ntBASIC1.19□□□□□ -2.22
Ushbp1Q8R370 Gm10548-202ENSMUST00000165672 272 ntBASIC1.19□□□□□ -2.22
Ushbp1Q8R370 Gm26062-201ENSMUST00000083379 107 ntBASIC1.19□□□□□ -2.22
Ushbp1Q8R370 Mir1904-201ENSMUST00000122702 80 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 Gm25968-201ENSMUST00000157167 100 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 Gm22770-201ENSMUST00000158368 67 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 Gm23008-201ENSMUST00000158946 80 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 Mir3083-201ENSMUST00000175377 64 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 Gm45197-201ENSMUST00000205288 151 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.18□□□□□ -2.22
Ushbp1Q8R370 Gm25247-201ENSMUST00000175475 90 ntBASIC1.17□□□□□ -2.22
Ushbp1Q8R370 Gm27993-201ENSMUST00000184362 85 ntBASIC1.17□□□□□ -2.22
Ushbp1Q8R370 Gm25629-201ENSMUST00000084001 107 ntBASIC1.17□□□□□ -2.22
Ushbp1Q8R370 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Gm23482-201ENSMUST00000104172 122 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Gm24555-201ENSMUST00000104548 124 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Gm25289-201ENSMUST00000122799 119 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Gm26158-201ENSMUST00000158973 119 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Gm25635-201ENSMUST00000082675 131 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Mir30a-201ENSMUST00000083471 71 ntBASIC1.16□□□□□ -2.22
Ushbp1Q8R370 Mir27b-201ENSMUST00000083541 73 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 157.1 ms