Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm22673-201ENSMUST00000104415 131 ntBASIC1,31□□□□□ -2,2
Sox30Q8CGW4 Gm14039-201ENSMUST00000118705 101 ntBASIC1,31□□□□□ -2,2
Sox30Q8CGW4 Gm22140-201ENSMUST00000158745 120 ntBASIC1,31□□□□□ -2,2
Sox30Q8CGW4 Mir3968-201ENSMUST00000175355 100 ntBASIC1,31□□□□□ -2,2
Sox30Q8CGW4 Gm3702-201ENSMUST00000211754 346 ntBASIC1,31□□□□□ -2,2
Sox30Q8CGW4 Gm24588-201ENSMUST00000116696 83 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm24384-201ENSMUST00000122693 75 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Mir1904-201ENSMUST00000122702 80 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Snord13-201ENSMUST00000157627 104 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm26089-201ENSMUST00000157898 107 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm24674-201ENSMUST00000179194 104 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm27419-201ENSMUST00000184576 109 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm44602-201ENSMUST00000205948 132 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm26441-201ENSMUST00000082590 104 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,3□□□□□ -2,2
Sox30Q8CGW4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Mir5619-201ENSMUST00000176065 61 ntBASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Gm24801-201ENSMUST00000178503 105 ntBASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Mir6240-201ENSMUST00000184281 117 ntBASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Gm27686-201ENSMUST00000185123 91 ntBASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Gm22458-201ENSMUST00000082576 107 ntBASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1,29□□□□□ -2,2
Sox30Q8CGW4 Mir1899-201ENSMUST00000122798 96 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm23715-201ENSMUST00000157354 106 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm25056-201ENSMUST00000157372 62 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm24399-201ENSMUST00000157869 74 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm25618-201ENSMUST00000179484 107 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm27639-201ENSMUST00000184937 85 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm44396-201ENSMUST00000199843 114 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm44948-201ENSMUST00000209050 149 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Mir5117-201ENSMUST00000083226 84 ntBASIC1,28□□□□□ -2,2
Sox30Q8CGW4 Gm27365-201ENSMUST00000184041 177 ntBASIC1,27□□□□□ -2,21
Sox30Q8CGW4 Mir468-201ENSMUST00000197332 78 ntBASIC1,27□□□□□ -2,21
Sox30Q8CGW4 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,27□□□□□ -2,21
Sox30Q8CGW4 Gm26062-201ENSMUST00000083379 107 ntBASIC1,27□□□□□ -2,21
Sox30Q8CGW4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,27□□□□□ -2,21
Sox30Q8CGW4 Gm23482-201ENSMUST00000104172 122 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Gm25061-201ENSMUST00000104665 107 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Gm11694-201ENSMUST00000118637 159 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Gm16399-201ENSMUST00000181423 219 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Gm20108-201ENSMUST00000219977 153 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Gm22809-201ENSMUST00000082743 156 ntBASIC1,26□□□□□ -2,21
Sox30Q8CGW4 Gm25110-201ENSMUST00000116684 121 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm25775-201ENSMUST00000116716 121 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm24795-201ENSMUST00000116737 121 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm25171-201ENSMUST00000116926 121 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm22862-201ENSMUST00000178593 121 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Mir6390-201ENSMUST00000184405 129 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Mir6962-201ENSMUST00000199512 63 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm26224-201ENSMUST00000082506 80 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm24527-201ENSMUST00000082920 107 ntBASIC1,25□□□□□ -2,21
Sox30Q8CGW4 Gm25495-201ENSMUST00000104431 131 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm23336-201ENSMUST00000117023 123 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm11857-201ENSMUST00000119817 324 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm22559-201ENSMUST00000157329 134 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm24686-201ENSMUST00000157755 93 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm23339-201ENSMUST00000158962 139 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm28767-201ENSMUST00000188601 114 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm44490-201ENSMUST00000198566 127 ntBASIC1,24□□□□□ -2,21
Sox30Q8CGW4 Gm25170-201ENSMUST00000104191 129 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Gm12432-201ENSMUST00000119540 186 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Gm24593-201ENSMUST00000122507 106 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Gm23114-201ENSMUST00000158478 117 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Gm25901-201ENSMUST00000158494 130 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Gm23369-201ENSMUST00000175406 105 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Mir3098-201ENSMUST00000175416 87 ntBASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1,23□□□□□ -2,21
Sox30Q8CGW4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1,22□□□□□ -2,21
Sox30Q8CGW4 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1,22□□□□□ -2,21
Sox30Q8CGW4 Gm12469-201ENSMUST00000117623 207 ntBASIC1,22□□□□□ -2,21
Sox30Q8CGW4 Gm25014-201ENSMUST00000158401 103 ntBASIC1,22□□□□□ -2,21
Sox30Q8CGW4 Gm26712-201ENSMUST00000180813 217 ntBASIC1,22□□□□□ -2,21
Sox30Q8CGW4 Mir6380-201ENSMUST00000184334 81 ntBASIC1,22□□□□□ -2,21
Sox30Q8CGW4 Mir343-201ENSMUST00000102360 75 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm26301-201ENSMUST00000104813 95 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm24183-201ENSMUST00000122572 93 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm23661-201ENSMUST00000122630 87 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm24154-201ENSMUST00000175261 130 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm22801-201ENSMUST00000175624 84 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Mir6381-201ENSMUST00000183426 87 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm27975-201ENSMUST00000184400 101 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm44488-201ENSMUST00000199467 119 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Mir29a-201ENSMUST00000083676 88 ntBASIC1,21□□□□□ -2,22
Sox30Q8CGW4 Gm23881-201ENSMUST00000116872 66 ntBASIC1,2□□□□□ -2,22
Sox30Q8CGW4 Gm22677-201ENSMUST00000116977 108 ntBASIC1,2□□□□□ -2,22
Sox30Q8CGW4 n-R5s70-201ENSMUST00000122650 116 ntBASIC1,2□□□□□ -2,22
Sox30Q8CGW4 Gm22067-201ENSMUST00000122790 107 ntBASIC1,2□□□□□ -2,22
Sox30Q8CGW4 Mir7059-201ENSMUST00000184825 59 ntBASIC1,2□□□□□ -2,22
Sox30Q8CGW4 Gm22544-201ENSMUST00000104349 127 ntBASIC1,19□□□□□ -2,22
Sox30Q8CGW4 Gm23528-201ENSMUST00000104571 132 ntBASIC1,19□□□□□ -2,22
Sox30Q8CGW4 Gm23329-201ENSMUST00000157415 108 ntBASIC1,19□□□□□ -2,22
Sox30Q8CGW4 Gm24728-201ENSMUST00000158226 125 ntBASIC1,19□□□□□ -2,22
Sox30Q8CGW4 Snora26-201ENSMUST00000175614 121 ntBASIC1,19□□□□□ -2,22
Sox30Q8CGW4 Gm25644-201ENSMUST00000083209 107 ntBASIC1,19□□□□□ -2,22
Retrieved 100 of 76,532 protein–RNA pairs in 143,1 ms