Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37579-201ENSMUST00000194291 142 ntBASIC2,27□□□□□ -2,05
Trim47Q8C0E3 Gm43885-201ENSMUST00000204928 2542 ntBASIC2,27□□□□□ -2,05
Trim47Q8C0E3 Gm43484-201ENSMUST00000198333 5966 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm24098-201ENSMUST00000102075 109 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm25381-201ENSMUST00000102078 109 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm6985-201ENSMUST00000121255 271 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm25658-201ENSMUST00000158472 128 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm25994-201ENSMUST00000175392 101 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm24134-201ENSMUST00000083361 71 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm24927-201ENSMUST00000083397 107 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Mir126a-201ENSMUST00000083606 73 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Mir107-201ENSMUST00000083660 87 ntBASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2,26□□□□□ -2,05
Trim47Q8C0E3 Gm15692-201ENSMUST00000152173 352 ntBASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Mir1949-201ENSMUST00000157434 141 ntBASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Gm23672-201ENSMUST00000157471 107 ntBASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Gm22403-201ENSMUST00000174919 84 ntBASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Gm22887-201ENSMUST00000178586 107 ntBASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Mir7016-201ENSMUST00000184308 72 ntBASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2,25□□□□□ -2,05
Trim47Q8C0E3 Mir876-201ENSMUST00000104659 81 ntBASIC2,24□□□□□ -2,05
Trim47Q8C0E3 Gm23342-201ENSMUST00000158958 115 ntBASIC2,24□□□□□ -2,05
Trim47Q8C0E3 Gm26158-201ENSMUST00000158973 119 ntBASIC2,24□□□□□ -2,05
Trim47Q8C0E3 Snord87-201ENSMUST00000175437 87 ntBASIC2,24□□□□□ -2,05
Trim47Q8C0E3 Gm26139-201ENSMUST00000180098 107 ntBASIC2,24□□□□□ -2,05
Trim47Q8C0E3 Gm27898-201ENSMUST00000183987 80 ntBASIC2,24□□□□□ -2,05
Trim47Q8C0E3 Mir758-201ENSMUST00000103260 81 ntBASIC2,23□□□□□ -2,05
Trim47Q8C0E3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC2,23□□□□□ -2,05
Trim47Q8C0E3 Gm44469-201ENSMUST00000198558 79 ntBASIC2,23□□□□□ -2,05
Trim47Q8C0E3 Gm44408-201ENSMUST00000200205 66 ntBASIC2,23□□□□□ -2,05
Trim47Q8C0E3 Gm45654-201ENSMUST00000210980 123 ntBASIC2,23□□□□□ -2,05
Trim47Q8C0E3 Gm26202-201ENSMUST00000082910 65 ntBASIC2,23□□□□□ -2,05
Trim47Q8C0E3 Gm25402-201ENSMUST00000082966 131 ntBASIC2,23□□□□□ -2,05
Trim47Q8C0E3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2,22□□□□□ -2,05
Trim47Q8C0E3 Gm24129-201ENSMUST00000158537 97 ntBASIC2,22□□□□□ -2,05
Trim47Q8C0E3 Mir669n-201ENSMUST00000158636 54 ntBASIC2,22□□□□□ -2,05
Trim47Q8C0E3 Gm25836-201ENSMUST00000158918 123 ntBASIC2,22□□□□□ -2,05
Trim47Q8C0E3 Mir7683-201ENSMUST00000183842 61 ntBASIC2,22□□□□□ -2,05
Trim47Q8C0E3 Mir7217-201ENSMUST00000200304 62 ntBASIC2,22□□□□□ -2,05
Trim47Q8C0E3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC2,22□□□□□ -2,05
Trim47Q8C0E3 Gm25524-201ENSMUST00000101821 107 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Gm25460-201ENSMUST00000157954 127 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Gm25600-201ENSMUST00000158357 106 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Gm25974-201ENSMUST00000158701 94 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Mir3061-201ENSMUST00000175129 91 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Gm23291-201ENSMUST00000175611 78 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Gm25186-201ENSMUST00000083909 108 ntBASIC2,21□□□□□ -2,06
Trim47Q8C0E3 Gm13231-201ENSMUST00000119218 2850 ntBASIC2,2□□□□□ -2,06
Trim47Q8C0E3 Gm28862-201ENSMUST00000188246 163 ntBASIC2,2□□□□□ -2,06
Trim47Q8C0E3 AC125488.1-201ENSMUST00000219586 212 ntBASIC2,2□□□□□ -2,06
Trim47Q8C0E3 Gm24478-201ENSMUST00000157439 158 ntBASIC2,19□□□□□ -2,06
Trim47Q8C0E3 Gm22727-201ENSMUST00000158090 116 ntBASIC2,19□□□□□ -2,06
Trim47Q8C0E3 Gm24677-201ENSMUST00000158755 150 ntBASIC2,19□□□□□ -2,06
Trim47Q8C0E3 Gm25366-201ENSMUST00000158845 124 ntBASIC2,19□□□□□ -2,06
Trim47Q8C0E3 Gm24154-201ENSMUST00000175261 130 ntBASIC2,19□□□□□ -2,06
Trim47Q8C0E3 Mir3087-201ENSMUST00000199405 56 ntBASIC2,19□□□□□ -2,06
Trim47Q8C0E3 Gm23109-201ENSMUST00000116867 126 ntBASIC2,18□□□□□ -2,06
Trim47Q8C0E3 n-R5s63-201ENSMUST00000122756 103 ntBASIC2,18□□□□□ -2,06
Trim47Q8C0E3 Gm23857-201ENSMUST00000158379 111 ntBASIC2,18□□□□□ -2,06
Trim47Q8C0E3 Gm24208-201ENSMUST00000082783 135 ntBASIC2,18□□□□□ -2,06
Trim47Q8C0E3 Gm10548-202ENSMUST00000165672 272 ntBASIC2,17□□□□□ -2,06
Trim47Q8C0E3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2,17□□□□□ -2,06
Trim47Q8C0E3 Gm25652-201ENSMUST00000083780 103 ntBASIC2,17□□□□□ -2,06
Trim47Q8C0E3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2,16□□□□□ -2,06
Trim47Q8C0E3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2,16□□□□□ -2,06
Trim47Q8C0E3 Gm25423-201ENSMUST00000157609 107 ntBASIC2,16□□□□□ -2,06
Trim47Q8C0E3 Gm23630-201ENSMUST00000175292 104 ntBASIC2,16□□□□□ -2,06
Trim47Q8C0E3 Gm22788-201ENSMUST00000157876 61 ntBASIC2,15□□□□□ -2,07
Trim47Q8C0E3 Gm24394-201ENSMUST00000158141 123 ntBASIC2,15□□□□□ -2,07
Trim47Q8C0E3 Gm22406-201ENSMUST00000174923 93 ntBASIC2,15□□□□□ -2,07
Trim47Q8C0E3 Gm22723-201ENSMUST00000083820 129 ntBASIC2,15□□□□□ -2,07
Trim47Q8C0E3 Gm24915-201ENSMUST00000157288 78 ntBASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Gm26089-201ENSMUST00000157898 107 ntBASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Gm22100-201ENSMUST00000157926 63 ntBASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Gm24725-201ENSMUST00000158229 125 ntBASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Gm23072-201ENSMUST00000158243 123 ntBASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Gm43907-201ENSMUST00000203128 117 ntBASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2,14□□□□□ -2,07
Trim47Q8C0E3 Gm25958-201ENSMUST00000175114 71 ntBASIC2,13□□□□□ -2,07
Trim47Q8C0E3 AC144671.1-201ENSMUST00000215265 99 ntBASIC2,13□□□□□ -2,07
Trim47Q8C0E3 AC116319.1-201ENSMUST00000227765 222 ntBASIC2,13□□□□□ -2,07
Trim47Q8C0E3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2,13□□□□□ -2,07
Trim47Q8C0E3 Gm24983-201ENSMUST00000104457 69 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Gm23469-201ENSMUST00000157131 104 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Gm27549-201ENSMUST00000183508 62 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Gm24151-201ENSMUST00000082758 141 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Mir30d-201ENSMUST00000083503 82 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Mir15b-201ENSMUST00000083646 64 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Gm25650-201ENSMUST00000083784 162 ntBASIC2,12□□□□□ -2,07
Trim47Q8C0E3 Gm24290-201ENSMUST00000157634 96 ntBASIC2,11□□□□□ -2,07
Trim47Q8C0E3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2,11□□□□□ -2,07
Trim47Q8C0E3 Gm25693-201ENSMUST00000175443 85 ntBASIC2,11□□□□□ -2,07
Trim47Q8C0E3 Gm27554-201ENSMUST00000185074 98 ntBASIC2,11□□□□□ -2,07
Trim47Q8C0E3 Gm22809-201ENSMUST00000082743 156 ntBASIC2,11□□□□□ -2,07
Trim47Q8C0E3 Mir487b-201ENSMUST00000102265 82 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Mir216b-201ENSMUST00000102363 86 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Gm23172-201ENSMUST00000157160 124 ntBASIC2,1□□□□□ -2,07
Trim47Q8C0E3 Gm25465-201ENSMUST00000157716 105 ntBASIC2,1□□□□□ -2,07
Retrieved 100 of 76,532 protein–RNA pairs in 10,3 ms