Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm24867-201ENSMUST00000104161 107 ntBASIC-1,73□□□□□ -2,69
Col16a1Q8BLX7 Gm22598-201ENSMUST00000157600 127 ntBASIC-1,73□□□□□ -2,69
Col16a1Q8BLX7 Gm25314-201ENSMUST00000178810 79 ntBASIC-1,73□□□□□ -2,69
Col16a1Q8BLX7 Gm25024-201ENSMUST00000179667 104 ntBASIC-1,73□□□□□ -2,69
Col16a1Q8BLX7 Gm22783-201ENSMUST00000104089 107 ntBASIC-1,74□□□□□ -2,69
Col16a1Q8BLX7 Gm23909-201ENSMUST00000104598 131 ntBASIC-1,74□□□□□ -2,69
Col16a1Q8BLX7 Gm23660-201ENSMUST00000178362 79 ntBASIC-1,74□□□□□ -2,69
Col16a1Q8BLX7 Gm24088-201ENSMUST00000179100 79 ntBASIC-1,74□□□□□ -2,69
Col16a1Q8BLX7 Gm28849-201ENSMUST00000188127 174 ntBASIC-1,74□□□□□ -2,69
Col16a1Q8BLX7 Gm43749-201ENSMUST00000199345 352 ntBASIC-1,74□□□□□ -2,69
Col16a1Q8BLX7 Mir764-201ENSMUST00000103259 108 ntBASIC-1,75□□□□□ -2,69
Col16a1Q8BLX7 Gm14574-201ENSMUST00000120644 279 ntBASIC-1,75□□□□□ -2,69
Col16a1Q8BLX7 Gm11204-201ENSMUST00000122438 147 ntBASIC-1,75□□□□□ -2,69
Col16a1Q8BLX7 Gm24111-201ENSMUST00000175491 97 ntBASIC-1,75□□□□□ -2,69
Col16a1Q8BLX7 Gm25285-201ENSMUST00000178951 90 ntBASIC-1,75□□□□□ -2,69
Col16a1Q8BLX7 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-1,75□□□□□ -2,69
Col16a1Q8BLX7 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm22557-201ENSMUST00000157804 102 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm23219-201ENSMUST00000158123 87 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm23474-201ENSMUST00000158884 75 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm23017-201ENSMUST00000177583 72 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Snora19-201ENSMUST00000082962 132 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm23658-201ENSMUST00000083233 132 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm25184-201ENSMUST00000157753 163 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm45402-201ENSMUST00000211796 223 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm22686-201ENSMUST00000082847 100 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm24202-201ENSMUST00000082948 103 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Mir470-201ENSMUST00000093565 75 ntBASIC-1,76□□□□□ -2,69
Col16a1Q8BLX7 Gm14567-201ENSMUST00000117155 174 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 Gm22790-201ENSMUST00000157229 129 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 Gm42594-201ENSMUST00000199511 246 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 Gm44959-201ENSMUST00000209127 231 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 AC165157.3-201ENSMUST00000220815 103 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 AC166358.7-201ENSMUST00000221132 108 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 AC125543.5-201ENSMUST00000222799 108 ntBASIC-1,77□□□□□ -2,69
Col16a1Q8BLX7 Gm27263-201ENSMUST00000184760 76 ntBASIC-1,78□□□□□ -2,69
Col16a1Q8BLX7 Gm22571-201ENSMUST00000082984 70 ntBASIC-1,78□□□□□ -2,69
Col16a1Q8BLX7 Gm23240-201ENSMUST00000083009 121 ntBASIC-1,78□□□□□ -2,69
Col16a1Q8BLX7 Gm25579-201ENSMUST00000083407 106 ntBASIC-1,78□□□□□ -2,69
Col16a1Q8BLX7 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-1,78□□□□□ -2,69
Col16a1Q8BLX7 Mir582-201ENSMUST00000103758 81 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Gm25507-201ENSMUST00000116981 144 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Mir1948-201ENSMUST00000157325 85 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Gm26084-201ENSMUST00000157903 104 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Zfp950-206ENSMUST00000178819 171 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Gm23191-201ENSMUST00000179147 107 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Gm44563-201ENSMUST00000207958 178 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 AC132918.1-201ENSMUST00000227877 925 ntBASIC-1,79□□□□□ -2,7
Col16a1Q8BLX7 Mir3535-201ENSMUST00000197651 147 ntBASIC-1,8□□□□□ -2,7
Col16a1Q8BLX7 Gm7240-201ENSMUST00000220769 664 ntBASIC-1,8□□□□□ -2,7
Col16a1Q8BLX7 AC154390.1-201ENSMUST00000225629 277 ntBASIC-1,8□□□□□ -2,7
Col16a1Q8BLX7 Gm25854-201ENSMUST00000082792 72 ntBASIC-1,8□□□□□ -2,7
Col16a1Q8BLX7 Gm24374-201ENSMUST00000104394 106 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm16356-201ENSMUST00000143300 169 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm22842-201ENSMUST00000157709 118 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm23955-201ENSMUST00000157214 100 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm24399-201ENSMUST00000157869 74 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm22089-201ENSMUST00000158336 102 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm25010-201ENSMUST00000158403 65 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm22165-201ENSMUST00000158414 103 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Cfap61-214ENSMUST00000167179 183 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm25158-201ENSMUST00000177681 121 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm23567-201ENSMUST00000178005 107 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm26229-201ENSMUST00000179699 121 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm26180-201ENSMUST00000179942 107 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 AC116589.3-202ENSMUST00000221770 649 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 AC116589.6-201ENSMUST00000222252 649 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm23507-201ENSMUST00000083078 107 ntBASIC-1,81□□□□□ -2,7
Col16a1Q8BLX7 Gm23987-201ENSMUST00000117039 129 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm22451-201ENSMUST00000122803 151 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm26482-201ENSMUST00000158015 62 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm25014-201ENSMUST00000158401 103 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm26400-201ENSMUST00000175012 85 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm45125-201ENSMUST00000206908 151 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm26122-201ENSMUST00000083362 82 ntBASIC-1,82□□□□□ -2,7
Col16a1Q8BLX7 Gm26293-201ENSMUST00000104170 84 ntBASIC-1,83□□□□□ -2,7
Col16a1Q8BLX7 Gm22402-201ENSMUST00000174920 110 ntBASIC-1,83□□□□□ -2,7
Col16a1Q8BLX7 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-1,83□□□□□ -2,7
Col16a1Q8BLX7 Gm23303-201ENSMUST00000082714 152 ntBASIC-1,83□□□□□ -2,7
Col16a1Q8BLX7 Gm24192-201ENSMUST00000157978 145 ntBASIC-1,84□□□□□ -2,7
Col16a1Q8BLX7 Gm27446-201ENSMUST00000183963 89 ntBASIC-1,84□□□□□ -2,7
Col16a1Q8BLX7 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm23214-201ENSMUST00000122716 157 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm23982-201ENSMUST00000157141 106 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm25862-201ENSMUST00000158250 129 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm26402-201ENSMUST00000158499 113 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm27699-201ENSMUST00000183553 180 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm27366-201ENSMUST00000184967 108 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm27798-201ENSMUST00000184989 71 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Mir9-2-201ENSMUST00000083490 72 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Gm22828-201ENSMUST00000083768 107 ntBASIC-1,85□□□□□ -2,7
Col16a1Q8BLX7 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-1,85□□□□□ -2,71
Col16a1Q8BLX7 Gm44489-201ENSMUST00000104619 97 ntBASIC-1,85□□□□□ -2,71
Col16a1Q8BLX7 Snord100-201ENSMUST00000116836 74 ntBASIC-1,85□□□□□ -2,71
Col16a1Q8BLX7 Gm6897-201ENSMUST00000117714 138 ntBASIC-1,85□□□□□ -2,71
Retrieved 100 of 76,532 protein–RNA pairs in 97,2 ms