Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm22196-201ENSMUST00000116865 109 ntBASIC0.34□□□□□ -2.36
Chd4Q6PDQ2 Traj61-201ENSMUST00000165025 72 ntBASIC0.34□□□□□ -2.36
Chd4Q6PDQ2 Gm22239-201ENSMUST00000175220 103 ntBASIC0.34□□□□□ -2.36
Chd4Q6PDQ2 Gm44602-201ENSMUST00000205948 132 ntBASIC0.34□□□□□ -2.36
Chd4Q6PDQ2 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.34□□□□□ -2.36
Chd4Q6PDQ2 Gm10813-201ENSMUST00000099936 90 ntBASIC0.34□□□□□ -2.36
Chd4Q6PDQ2 Gm26018-201ENSMUST00000104406 128 ntBASIC0.33□□□□□ -2.36
Chd4Q6PDQ2 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.33□□□□□ -2.36
Chd4Q6PDQ2 Mir710-201ENSMUST00000102088 110 ntBASIC0.32□□□□□ -2.36
Chd4Q6PDQ2 Gm22706-201ENSMUST00000157907 112 ntBASIC0.32□□□□□ -2.36
Chd4Q6PDQ2 Mir1949-202ENSMUST00000199259 70 ntBASIC0.32□□□□□ -2.36
Chd4Q6PDQ2 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.32□□□□□ -2.36
Chd4Q6PDQ2 Gm44345-201ENSMUST00000199560 135 ntBASIC0.32□□□□□ -2.36
Chd4Q6PDQ2 Mir670-201ENSMUST00000102380 100 ntBASIC0.31□□□□□ -2.36
Chd4Q6PDQ2 Gm23036-201ENSMUST00000157885 99 ntBASIC0.31□□□□□ -2.36
Chd4Q6PDQ2 Gm27851-201ENSMUST00000183529 63 ntBASIC0.31□□□□□ -2.36
Chd4Q6PDQ2 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm24648-201ENSMUST00000157111 132 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm24717-201ENSMUST00000157522 124 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Mir7229-201ENSMUST00000197062 53 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm24903-201ENSMUST00000158131 126 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm24500-201ENSMUST00000158447 124 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm26498-201ENSMUST00000177799 79 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm26230-201ENSMUST00000180141 79 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm44470-201ENSMUST00000203913 142 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.3□□□□□ -2.36
Chd4Q6PDQ2 Snord64-201ENSMUST00000104003 67 ntBASIC0.29□□□□□ -2.36
Chd4Q6PDQ2 Gm16186-201ENSMUST00000120132 216 ntBASIC0.29□□□□□ -2.36
Chd4Q6PDQ2 Gm24649-201ENSMUST00000157106 134 ntBASIC0.29□□□□□ -2.36
Chd4Q6PDQ2 Gm26291-201ENSMUST00000158889 137 ntBASIC0.29□□□□□ -2.36
Chd4Q6PDQ2 Mir669j-201ENSMUST00000179023 121 ntBASIC0.28□□□□□ -2.36
Chd4Q6PDQ2 Gm26062-201ENSMUST00000083379 107 ntBASIC0.28□□□□□ -2.36
Chd4Q6PDQ2 Gm22349-201ENSMUST00000157864 107 ntBASIC0.28□□□□□ -2.36
Chd4Q6PDQ2 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.28□□□□□ -2.36
Chd4Q6PDQ2 Gm26207-201ENSMUST00000082909 104 ntBASIC0.28□□□□□ -2.36
Chd4Q6PDQ2 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.28□□□□□ -2.36
Chd4Q6PDQ2 Gm24233-201ENSMUST00000104317 122 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Gm24683-201ENSMUST00000104840 88 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Gm24009-201ENSMUST00000157734 93 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Gm25974-201ENSMUST00000158701 94 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Gm24223-201ENSMUST00000158827 90 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Gm22638-201ENSMUST00000179674 107 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.27□□□□□ -2.37
Chd4Q6PDQ2 Gm27475-201ENSMUST00000183420 61 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Mir7065-201ENSMUST00000185110 61 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Gm10351-201ENSMUST00000087694 125 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Mir764-201ENSMUST00000103259 108 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Gm12013-201ENSMUST00000121971 155 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Gm23601-201ENSMUST00000157259 131 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Scarna8-201ENSMUST00000158333 131 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Mir6365-201ENSMUST00000183990 101 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Gm23239-201ENSMUST00000083006 181 ntBASIC0.26□□□□□ -2.37
Chd4Q6PDQ2 Gm24001-201ENSMUST00000158463 85 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm24842-201ENSMUST00000158681 54 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm25367-201ENSMUST00000158846 106 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm25071-201ENSMUST00000175232 70 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm25091-201ENSMUST00000103997 71 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm25623-201ENSMUST00000157216 108 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm22788-201ENSMUST00000157876 61 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm22520-201ENSMUST00000158269 129 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Mir3108-201ENSMUST00000175500 79 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm38298-201ENSMUST00000193578 118 ntBASIC0.25□□□□□ -2.37
Chd4Q6PDQ2 Gm25680-201ENSMUST00000116917 126 ntBASIC0.24□□□□□ -2.37
Chd4Q6PDQ2 Gm22635-201ENSMUST00000116962 126 ntBASIC0.24□□□□□ -2.37
Chd4Q6PDQ2 Gm22962-201ENSMUST00000157962 73 ntBASIC0.24□□□□□ -2.37
Chd4Q6PDQ2 Gm25014-201ENSMUST00000158401 103 ntBASIC0.23□□□□□ -2.37
Chd4Q6PDQ2 Gm23291-201ENSMUST00000175611 78 ntBASIC0.23□□□□□ -2.37
Chd4Q6PDQ2 Gm22336-201ENSMUST00000157719 107 ntBASIC0.23□□□□□ -2.37
Chd4Q6PDQ2 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.23□□□□□ -2.37
Chd4Q6PDQ2 Snord95-201ENSMUST00000082846 68 ntBASIC0.23□□□□□ -2.37
Chd4Q6PDQ2 Gm26168-201ENSMUST00000083787 112 ntBASIC0.23□□□□□ -2.37
Chd4Q6PDQ2 Gm17528-201ENSMUST00000171026 239 ntBASIC0.22□□□□□ -2.37
Chd4Q6PDQ2 Gm45197-201ENSMUST00000205288 151 ntBASIC0.22□□□□□ -2.37
Chd4Q6PDQ2 Gm24256-201ENSMUST00000083696 84 ntBASIC0.22□□□□□ -2.37
Chd4Q6PDQ2 Gm25056-201ENSMUST00000157372 62 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Gm24073-201ENSMUST00000158177 106 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Gm26337-201ENSMUST00000178000 79 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Gm25040-201ENSMUST00000103877 66 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Gm25618-201ENSMUST00000179484 107 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Gm22509-201ENSMUST00000082775 107 ntBASIC0.21□□□□□ -2.38
Chd4Q6PDQ2 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Chd4Q6PDQ2 Gm23661-201ENSMUST00000122630 87 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm20734-201ENSMUST00000216939 193 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm24524-201ENSMUST00000082925 170 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm13065-201ENSMUST00000119178 141 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm25887-201ENSMUST00000157777 84 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm42845-201ENSMUST00000197766 105 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm22981-201ENSMUST00000082611 75 ntBASIC0.19□□□□□ -2.38
Chd4Q6PDQ2 Gm22368-201ENSMUST00000102416 109 ntBASIC0.18□□□□□ -2.38
Chd4Q6PDQ2 Mir802-201ENSMUST00000103258 97 ntBASIC0.18□□□□□ -2.38
Chd4Q6PDQ2 Gm26412-201ENSMUST00000157666 55 ntBASIC0.18□□□□□ -2.38
Chd4Q6PDQ2 Mir3105-201ENSMUST00000175480 85 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 215.7 ms