Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm27987-201ENSMUST00000184023 93 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm22458-201ENSMUST00000082576 107 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm22809-201ENSMUST00000082743 156 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm25644-201ENSMUST00000083209 107 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Gm25650-201ENSMUST00000083784 162 ntBASIC1.47□□□□□ -2.17
Shkbp1Q6P7W2 Mir223-201ENSMUST00000102112 110 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Gm26082-201ENSMUST00000104070 127 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Gm22544-201ENSMUST00000104349 127 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Gm24384-201ENSMUST00000122693 75 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Snora26-201ENSMUST00000175614 121 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Gm25740-201ENSMUST00000180247 107 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Mir6962-201ENSMUST00000199512 63 ntBASIC1.46□□□□□ -2.18
Shkbp1Q6P7W2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Shkbp1Q6P7W2 Mir343-201ENSMUST00000102360 75 ntBASIC1.45□□□□□ -2.18
Shkbp1Q6P7W2 Gm12469-201ENSMUST00000117623 207 ntBASIC1.45□□□□□ -2.18
Shkbp1Q6P7W2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Shkbp1Q6P7W2 Gm26478-201ENSMUST00000122611 133 ntBASIC1.44□□□□□ -2.18
Shkbp1Q6P7W2 Gm24686-201ENSMUST00000157755 93 ntBASIC1.44□□□□□ -2.18
Shkbp1Q6P7W2 Mir8116-201ENSMUST00000184134 97 ntBASIC1.44□□□□□ -2.18
Shkbp1Q6P7W2 Gm23056-201ENSMUST00000082803 111 ntBASIC1.44□□□□□ -2.18
Shkbp1Q6P7W2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm25322-201ENSMUST00000122556 104 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm22067-201ENSMUST00000122790 107 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm25901-201ENSMUST00000158494 130 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Mir3968-201ENSMUST00000175355 100 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Mir468-201ENSMUST00000197332 78 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm44962-201ENSMUST00000206460 279 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm23293-201ENSMUST00000082552 104 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm24162-201ENSMUST00000093665 102 ntBASIC1.43□□□□□ -2.18
Shkbp1Q6P7W2 Gm25542-201ENSMUST00000116889 94 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Gm24379-201ENSMUST00000122695 86 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Gm23221-201ENSMUST00000158118 93 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Gm22522-201ENSMUST00000158271 151 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Gm44948-201ENSMUST00000209050 149 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Gm26202-201ENSMUST00000082910 65 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Mir5117-201ENSMUST00000083226 84 ntBASIC1.42□□□□□ -2.18
Shkbp1Q6P7W2 Gm24129-201ENSMUST00000158537 97 ntBASIC1.41□□□□□ -2.18
Shkbp1Q6P7W2 Mir7063-201ENSMUST00000184158 91 ntBASIC1.41□□□□□ -2.18
Shkbp1Q6P7W2 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Shkbp1Q6P7W2 Gm24494-201ENSMUST00000083804 81 ntBASIC1.41□□□□□ -2.18
Shkbp1Q6P7W2 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Shkbp1Q6P7W2 Gm24476-201ENSMUST00000157437 131 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Gm25663-201ENSMUST00000157698 135 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Gm26038-201ENSMUST00000158151 106 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Gm10548-202ENSMUST00000165672 272 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Gm44469-201ENSMUST00000198558 79 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Gm43927-201ENSMUST00000204599 117 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Gm25854-201ENSMUST00000082792 72 ntBASIC1.4□□□□□ -2.19
Shkbp1Q6P7W2 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm23661-201ENSMUST00000122630 87 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm24915-201ENSMUST00000157288 78 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm24199-201ENSMUST00000157808 136 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm24547-201ENSMUST00000158649 149 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm24154-201ENSMUST00000175261 130 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm43038-201ENSMUST00000202359 88 ntBASIC1.39□□□□□ -2.19
Shkbp1Q6P7W2 Gm24648-201ENSMUST00000157111 132 ntBASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Gm22539-201ENSMUST00000158167 117 ntBASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Gm22164-201ENSMUST00000158413 106 ntBASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Gm22801-201ENSMUST00000175624 84 ntBASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Gm38295-201ENSMUST00000191951 151 ntBASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Mir509-201ENSMUST00000196089 75 ntBASIC1.38□□□□□ -2.19
Shkbp1Q6P7W2 Gm22780-201ENSMUST00000104084 132 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Gm23857-201ENSMUST00000158379 111 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Gm27297-201ENSMUST00000183395 105 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Mir7059-201ENSMUST00000184825 59 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Mir29a-201ENSMUST00000083676 88 ntBASIC1.37□□□□□ -2.19
Shkbp1Q6P7W2 Gm25417-201ENSMUST00000104212 131 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm12432-201ENSMUST00000119540 186 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm24064-201ENSMUST00000157486 106 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Snord13-201ENSMUST00000157627 104 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm24009-201ENSMUST00000157734 93 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm25600-201ENSMUST00000158357 106 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm25974-201ENSMUST00000158701 94 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm23636-201ENSMUST00000175070 95 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm26712-201ENSMUST00000180813 217 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm36956-201ENSMUST00000193830 214 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm25798-201ENSMUST00000082641 107 ntBASIC1.36□□□□□ -2.19
Shkbp1Q6P7W2 Gm22785-201ENSMUST00000104087 132 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Mir1961-201ENSMUST00000158643 112 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Gm26029-201ENSMUST00000158659 132 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Mir6240-201ENSMUST00000184281 117 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Mir7052-201ENSMUST00000184821 65 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Mir211-201ENSMUST00000083651 106 ntBASIC1.35□□□□□ -2.19
Shkbp1Q6P7W2 Mir709-201ENSMUST00000102190 88 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm23237-201ENSMUST00000104639 92 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm25110-201ENSMUST00000116684 121 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm25775-201ENSMUST00000116716 121 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm24795-201ENSMUST00000116737 121 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm25171-201ENSMUST00000116926 121 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm24868-201ENSMUST00000157265 136 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 143.8 ms