Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm26922-201ENSMUST00000082687 72 ntBASIC1.85□□□□□ -2.11
Sh3rf1Q69ZI1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.85□□□□□ -2.11
Sh3rf1Q69ZI1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Gm23881-201ENSMUST00000116872 66 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Gm23661-201ENSMUST00000122630 87 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Gm24728-201ENSMUST00000158226 125 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Gm23419-201ENSMUST00000175523 84 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Mir6352-201ENSMUST00000184495 116 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Mir3087-201ENSMUST00000199405 56 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Gm23100-201ENSMUST00000083455 141 ntBASIC1.84□□□□□ -2.11
Sh3rf1Q69ZI1 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.83□□□□□ -2.12
Sh3rf1Q69ZI1 Gm24396-201ENSMUST00000116905 93 ntBASIC1.83□□□□□ -2.12
Sh3rf1Q69ZI1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.83□□□□□ -2.12
Sh3rf1Q69ZI1 Gm38295-201ENSMUST00000191951 151 ntBASIC1.83□□□□□ -2.12
Sh3rf1Q69ZI1 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Sh3rf1Q69ZI1 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.82□□□□□ -2.12
Sh3rf1Q69ZI1 Gm25056-201ENSMUST00000157372 62 ntBASIC1.82□□□□□ -2.12
Sh3rf1Q69ZI1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.82□□□□□ -2.12
Sh3rf1Q69ZI1 Gm43927-201ENSMUST00000204599 117 ntBASIC1.82□□□□□ -2.12
Sh3rf1Q69ZI1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Sh3rf1Q69ZI1 Gm25423-201ENSMUST00000157609 107 ntBASIC1.81□□□□□ -2.12
Sh3rf1Q69ZI1 Gm24009-201ENSMUST00000157734 93 ntBASIC1.81□□□□□ -2.12
Sh3rf1Q69ZI1 Gm22556-201ENSMUST00000157803 100 ntBASIC1.81□□□□□ -2.12
Sh3rf1Q69ZI1 Gm28862-201ENSMUST00000188246 163 ntBASIC1.81□□□□□ -2.12
Sh3rf1Q69ZI1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.81□□□□□ -2.12
Sh3rf1Q69ZI1 Gm45754-201ENSMUST00000212380 279 ntBASIC1.81□□□□□ -2.12
Sh3rf1Q69ZI1 Gm25622-201ENSMUST00000157217 104 ntBASIC1.8□□□□□ -2.12
Sh3rf1Q69ZI1 Gm24547-201ENSMUST00000158649 149 ntBASIC1.8□□□□□ -2.12
Sh3rf1Q69ZI1 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Sh3rf1Q69ZI1 Mir7679-201ENSMUST00000183379 63 ntBASIC1.8□□□□□ -2.12
Sh3rf1Q69ZI1 Mir7678-201ENSMUST00000185076 71 ntBASIC1.8□□□□□ -2.12
Sh3rf1Q69ZI1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Sh3rf1Q69ZI1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.79□□□□□ -2.12
Sh3rf1Q69ZI1 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Sh3rf1Q69ZI1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.79□□□□□ -2.12
Sh3rf1Q69ZI1 Mir3064-201ENSMUST00000175532 67 ntBASIC1.79□□□□□ -2.12
Sh3rf1Q69ZI1 Gm24638-201ENSMUST00000179807 132 ntBASIC1.79□□□□□ -2.12
Sh3rf1Q69ZI1 Gm25650-201ENSMUST00000083784 162 ntBASIC1.79□□□□□ -2.12
Sh3rf1Q69ZI1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Mir223-201ENSMUST00000102112 110 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Gm25609-201ENSMUST00000104019 104 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Gm25619-201ENSMUST00000122621 104 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Gm23172-201ENSMUST00000157160 124 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Gm23106-201ENSMUST00000157554 101 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Gm24221-201ENSMUST00000158833 313 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.78□□□□□ -2.12
Sh3rf1Q69ZI1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Sh3rf1Q69ZI1 Gm23060-201ENSMUST00000102345 109 ntBASIC1.77□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25552-201ENSMUST00000158081 91 ntBASIC1.77□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22413-201ENSMUST00000175465 85 ntBASIC1.77□□□□□ -2.13
Sh3rf1Q69ZI1 Gm44469-201ENSMUST00000198558 79 ntBASIC1.77□□□□□ -2.13
Sh3rf1Q69ZI1 Mir544-201ENSMUST00000103813 78 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22149-201ENSMUST00000104442 136 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25600-201ENSMUST00000158357 106 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm24129-201ENSMUST00000158537 97 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm26359-201ENSMUST00000158873 101 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm26158-201ENSMUST00000158973 119 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22929-201ENSMUST00000175517 107 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm27297-201ENSMUST00000183395 105 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22809-201ENSMUST00000082743 156 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Snord14a-201ENSMUST00000082807 87 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Gm26202-201ENSMUST00000082910 65 ntBASIC1.76□□□□□ -2.13
Sh3rf1Q69ZI1 Mir873a-201ENSMUST00000104863 77 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm23857-201ENSMUST00000158379 111 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25974-201ENSMUST00000158701 94 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm23477-201ENSMUST00000158882 128 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25035-201ENSMUST00000175414 77 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm44948-201ENSMUST00000209050 149 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22753-201ENSMUST00000083657 107 ntBASIC1.75□□□□□ -2.13
Sh3rf1Q69ZI1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.74□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25991-201ENSMUST00000102439 99 ntBASIC1.74□□□□□ -2.13
Sh3rf1Q69ZI1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.74□□□□□ -2.13
Sh3rf1Q69ZI1 Gm10548-202ENSMUST00000165672 272 ntBASIC1.74□□□□□ -2.13
Sh3rf1Q69ZI1 Gm24311-201ENSMUST00000082570 104 ntBASIC1.74□□□□□ -2.13
Sh3rf1Q69ZI1 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.73□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.73□□□□□ -2.13
Sh3rf1Q69ZI1 Gm24229-201ENSMUST00000158830 118 ntBASIC1.73□□□□□ -2.13
Sh3rf1Q69ZI1 Gm24202-201ENSMUST00000082948 103 ntBASIC1.73□□□□□ -2.13
Sh3rf1Q69ZI1 Gm25756-201ENSMUST00000103990 136 ntBASIC1.72□□□□□ -2.13
Sh3rf1Q69ZI1 Gm22386-201ENSMUST00000158192 129 ntBASIC1.72□□□□□ -2.13
Sh3rf1Q69ZI1 Mir7675-201ENSMUST00000184262 58 ntBASIC1.72□□□□□ -2.13
Sh3rf1Q69ZI1 Mir468-201ENSMUST00000197332 78 ntBASIC1.72□□□□□ -2.13
Sh3rf1Q69ZI1 Snord1a-201ENSMUST00000083160 74 ntBASIC1.72□□□□□ -2.13
Sh3rf1Q69ZI1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm25110-201ENSMUST00000116684 121 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm25775-201ENSMUST00000116716 121 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm24795-201ENSMUST00000116737 121 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm25171-201ENSMUST00000116926 121 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm23170-201ENSMUST00000157158 106 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm24331-201ENSMUST00000175099 67 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm23801-201ENSMUST00000175561 67 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm22801-201ENSMUST00000175624 84 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm24485-201ENSMUST00000178283 67 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm22862-201ENSMUST00000178593 121 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Sh3rf1Q69ZI1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 138.9 ms