Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm27894-201ENSMUST00000184177 92 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Mir6390-201ENSMUST00000184405 129 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Mir29a-201ENSMUST00000083676 88 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Gm25170-201ENSMUST00000104191 129 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Gm24984-201ENSMUST00000104454 133 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Gm24783-201ENSMUST00000157639 100 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Gm25870-201ENSMUST00000179845 79 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Snord60-201ENSMUST00000082834 78 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Mir148b-201ENSMUST00000083626 97 ntBASIC1.54□□□□□ -2.16
Col8a1Q00780 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Col8a1Q00780 Gm22544-201ENSMUST00000104349 127 ntBASIC1.53□□□□□ -2.16
Col8a1Q00780 Mir3096-201ENSMUST00000116685 71 ntBASIC1.53□□□□□ -2.16
Col8a1Q00780 Gm22727-201ENSMUST00000158090 116 ntBASIC1.53□□□□□ -2.16
Col8a1Q00780 Gm23726-201ENSMUST00000178937 67 ntBASIC1.53□□□□□ -2.16
Col8a1Q00780 Mir509-201ENSMUST00000196089 75 ntBASIC1.53□□□□□ -2.16
Col8a1Q00780 Gm24151-201ENSMUST00000082758 141 ntBASIC1.53□□□□□ -2.16
Col8a1Q00780 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col8a1Q00780 Gm12469-201ENSMUST00000117623 207 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Gm15115-201ENSMUST00000121145 264 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Col8a1Q00780 U6.1-201ENSMUST00000157443 101 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Gm24728-201ENSMUST00000158226 125 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Gm25901-201ENSMUST00000158494 130 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Mir7052-201ENSMUST00000184821 65 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Gm43927-201ENSMUST00000204599 117 ntBASIC1.52□□□□□ -2.17
Col8a1Q00780 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col8a1Q00780 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm23881-201ENSMUST00000116872 66 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm24648-201ENSMUST00000157111 132 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm25658-201ENSMUST00000158472 128 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm22802-201ENSMUST00000175621 89 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm27511-201ENSMUST00000183502 127 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm27517-201ENSMUST00000184347 236 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm18433-201ENSMUST00000192747 197 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm43865-201ENSMUST00000204721 127 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm24406-201ENSMUST00000083026 128 ntBASIC1.51□□□□□ -2.17
Col8a1Q00780 Gm24378-201ENSMUST00000122699 106 ntBASIC1.5□□□□□ -2.17
Col8a1Q00780 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.5□□□□□ -2.17
Col8a1Q00780 Gm25730-201ENSMUST00000178753 165 ntBASIC1.5□□□□□ -2.17
Col8a1Q00780 Gm26712-201ENSMUST00000180813 217 ntBASIC1.5□□□□□ -2.17
Col8a1Q00780 Gm24624-201ENSMUST00000082617 164 ntBASIC1.5□□□□□ -2.17
Col8a1Q00780 Gm24165-201ENSMUST00000082718 128 ntBASIC1.5□□□□□ -2.17
Col8a1Q00780 Gm25964-201ENSMUST00000157171 97 ntBASIC1.49□□□□□ -2.17
Col8a1Q00780 Gm27722-201ENSMUST00000183908 76 ntBASIC1.49□□□□□ -2.17
Col8a1Q00780 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Col8a1Q00780 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.49□□□□□ -2.17
Col8a1Q00780 Gm23661-201ENSMUST00000122630 87 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Gm23306-201ENSMUST00000179058 105 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Gm28862-201ENSMUST00000188246 163 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Gm38295-201ENSMUST00000191951 151 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Mir6962-201ENSMUST00000199512 63 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Gm26202-201ENSMUST00000082910 65 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Gm25705-201ENSMUST00000083119 104 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Mir200b-201ENSMUST00000083615 70 ntBASIC1.48□□□□□ -2.17
Col8a1Q00780 Gm25609-201ENSMUST00000104019 104 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Gm23336-201ENSMUST00000117023 123 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Gm24009-201ENSMUST00000157734 93 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Gm24129-201ENSMUST00000158537 97 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Mir6240-201ENSMUST00000184281 117 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Mir7059-201ENSMUST00000184825 59 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Gm45754-201ENSMUST00000212380 279 ntBASIC1.47□□□□□ -2.17
Col8a1Q00780 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col8a1Q00780 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col8a1Q00780 Gm24396-201ENSMUST00000116905 93 ntBASIC1.46□□□□□ -2.18
Col8a1Q00780 Gm25622-201ENSMUST00000157217 104 ntBASIC1.46□□□□□ -2.18
Col8a1Q00780 Gm25958-201ENSMUST00000175114 71 ntBASIC1.46□□□□□ -2.18
Col8a1Q00780 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col8a1Q00780 Mir6394-201ENSMUST00000184738 99 ntBASIC1.46□□□□□ -2.18
Col8a1Q00780 Gm44469-201ENSMUST00000198558 79 ntBASIC1.46□□□□□ -2.18
Col8a1Q00780 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm24342-201ENSMUST00000103907 104 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm23172-201ENSMUST00000157160 124 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm25423-201ENSMUST00000157609 107 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm24221-201ENSMUST00000158833 313 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm23419-201ENSMUST00000175523 84 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Gm27297-201ENSMUST00000183395 105 ntBASIC1.45□□□□□ -2.18
Col8a1Q00780 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm25619-201ENSMUST00000122621 104 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm25056-201ENSMUST00000157372 62 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm23106-201ENSMUST00000157554 101 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm23477-201ENSMUST00000158882 128 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm26158-201ENSMUST00000158973 119 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm10548-202ENSMUST00000165672 272 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm27544-201ENSMUST00000185069 155 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Mir7021-201ENSMUST00000197026 63 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm24311-201ENSMUST00000082570 104 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm23100-201ENSMUST00000083455 141 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Mir320-201ENSMUST00000083594 82 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Gm22753-201ENSMUST00000083657 107 ntBASIC1.44□□□□□ -2.18
Col8a1Q00780 Mir544-201ENSMUST00000103813 78 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 212.1 ms