Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Traj61-201ENSMUST00000165025 72 ntBASIC0.11□□□□□ -2.39
Sox3P53784 Gm24106-201ENSMUST00000175498 127 ntBASIC0.11□□□□□ -2.39
Sox3P53784 Gm44602-201ENSMUST00000205948 132 ntBASIC0.11□□□□□ -2.39
Sox3P53784 Gm22303-201ENSMUST00000082686 122 ntBASIC0.11□□□□□ -2.39
Sox3P53784 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.11□□□□□ -2.39
Sox3P53784 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.11□□□□□ -2.39
Sox3P53784 Gm23821-201ENSMUST00000158738 106 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Gm17528-201ENSMUST00000171026 239 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Gm25952-201ENSMUST00000175329 74 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Gm25596-201ENSMUST00000178368 107 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Gm27297-201ENSMUST00000183395 105 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Gm22652-201ENSMUST00000083207 131 ntBASIC0.1□□□□□ -2.39
Sox3P53784 Mir669b-201ENSMUST00000102172 97 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Gm26011-201ENSMUST00000104410 104 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Gm11694-201ENSMUST00000118637 159 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Gm22451-201ENSMUST00000122803 151 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Gm24246-201ENSMUST00000157315 132 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Gm24718-201ENSMUST00000157521 136 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Gm23260-201ENSMUST00000158317 172 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Mir8107-201ENSMUST00000184024 117 ntBASIC0.09□□□□□ -2.4
Sox3P53784 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Snord95-201ENSMUST00000082846 68 ntBASIC0.09□□□□□ -2.4
Sox3P53784 Mir216b-201ENSMUST00000102363 86 ntBASIC0.08□□□□□ -2.4
Sox3P53784 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.08□□□□□ -2.4
Sox3P53784 Gm23661-201ENSMUST00000122630 87 ntBASIC0.08□□□□□ -2.4
Sox3P53784 Gm28001-201ENSMUST00000183561 117 ntBASIC0.08□□□□□ -2.4
Sox3P53784 Mir21c-201ENSMUST00000184910 78 ntBASIC0.08□□□□□ -2.4
Sox3P53784 Mir7116-201ENSMUST00000195956 70 ntBASIC0.08□□□□□ -2.4
Sox3P53784 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.08□□□□□ -2.4
Sox3P53784 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
Sox3P53784 Mir467g-201ENSMUST00000116906 120 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Gm12013-201ENSMUST00000121971 155 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Gm24009-201ENSMUST00000157734 93 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Gm26084-201ENSMUST00000157903 104 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Gm43749-201ENSMUST00000199345 352 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Gm43927-201ENSMUST00000204599 117 ntBASIC0.06□□□□□ -2.4
Sox3P53784 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.06□□□□□ -2.4
Sox3P53784 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Snord49b-201ENSMUST00000082503 72 ntBASIC0.06□□□□□ -2.4
Sox3P53784 Gm23482-201ENSMUST00000104172 122 ntBASIC0.05□□□□□ -2.4
Sox3P53784 Gm24141-201ENSMUST00000122776 115 ntBASIC0.05□□□□□ -2.4
Sox3P53784 Gm25367-201ENSMUST00000158846 106 ntBASIC0.05□□□□□ -2.4
Sox3P53784 Gm45197-201ENSMUST00000205288 151 ntBASIC0.05□□□□□ -2.4
Sox3P53784 Gm25006-201ENSMUST00000083813 107 ntBASIC0.05□□□□□ -2.4
Sox3P53784 Snord72-201ENSMUST00000104549 81 ntBASIC0.04□□□□□ -2.4
Sox3P53784 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
Sox3P53784 Gm26168-201ENSMUST00000083787 112 ntBASIC0.04□□□□□ -2.4
Sox3P53784 Gm25091-201ENSMUST00000103997 71 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm24374-201ENSMUST00000104394 106 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm22788-201ENSMUST00000157876 61 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm22089-201ENSMUST00000158336 102 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm22942-201ENSMUST00000158563 124 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm27928-201ENSMUST00000183747 256 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm44327-201ENSMUST00000200068 117 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm44803-201ENSMUST00000204384 156 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm25802-201ENSMUST00000082639 77 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Sox3P53784 Gm24717-201ENSMUST00000157522 124 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Gm22087-201ENSMUST00000158339 88 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Gm45374-201ENSMUST00000211388 136 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.02□□□□□ -2.41
Sox3P53784 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Gm25899-201ENSMUST00000082672 141 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Gm24524-201ENSMUST00000082925 170 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Mir382-201ENSMUST00000083494 76 ntBASIC0.02□□□□□ -2.41
Sox3P53784 Mir764-201ENSMUST00000103259 108 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm24913-201ENSMUST00000157286 107 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm28270-201ENSMUST00000188550 109 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm28328-201ENSMUST00000188869 109 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm29047-201ENSMUST00000189816 108 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm44328-201ENSMUST00000199331 75 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm45492-201ENSMUST00000211611 288 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm22981-201ENSMUST00000082611 75 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm25401-201ENSMUST00000082975 106 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Mir18-201ENSMUST00000083469 96 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Gm24256-201ENSMUST00000083696 84 ntBASIC0.01□□□□□ -2.41
Sox3P53784 Mir672-201ENSMUST00000102331 100 ntBASIC0□□□□□ -2.41
Sox3P53784 Gm22368-201ENSMUST00000102416 109 ntBASIC0□□□□□ -2.41
Sox3P53784 Gm24263-201ENSMUST00000104059 107 ntBASIC0□□□□□ -2.41
Sox3P53784 Gm22100-201ENSMUST00000157926 63 ntBASIC0□□□□□ -2.41
Sox3P53784 Gm24884-201ENSMUST00000158784 119 ntBASIC0□□□□□ -2.41
Sox3P53784 Gm27735-201ENSMUST00000185085 76 ntBASIC0□□□□□ -2.41
Sox3P53784 Mir3065-201ENSMUST00000198674 87 ntBASIC0□□□□□ -2.41
Sox3P53784 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC0□□□□□ -2.41
Sox3P53784 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0□□□□□ -2.41
Sox3P53784 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.01□□□□□ -2.41
Sox3P53784 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.01□□□□□ -2.41
Sox3P53784 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.01□□□□□ -2.41
Sox3P53784 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.01□□□□□ -2.41
Sox3P53784 Gm44322-201ENSMUST00000196830 115 ntBASIC-0.01□□□□□ -2.41
Sox3P53784 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Sox3P53784 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm8034-201ENSMUST00000178853 132 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.02□□□□□ -2.41
Sox3P53784 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms