Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm15692-201ENSMUST00000152173 352 ntBASIC1,82□□□□□ -2,12
Sox1P53783 Mir1954-201ENSMUST00000175595 86 ntBASIC1,82□□□□□ -2,12
Sox1P53783 Gm25644-201ENSMUST00000083209 107 ntBASIC1,82□□□□□ -2,12
Sox1P53783 Mir34c-201ENSMUST00000083653 77 ntBASIC1,82□□□□□ -2,12
Sox1P53783 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,82□□□□□ -2,12
Sox1P53783 Mir3098-201ENSMUST00000175416 87 ntBASIC1,81□□□□□ -2,12
Sox1P53783 Gm24674-201ENSMUST00000179194 104 ntBASIC1,81□□□□□ -2,12
Sox1P53783 Gm22458-201ENSMUST00000082576 107 ntBASIC1,81□□□□□ -2,12
Sox1P53783 Mir343-201ENSMUST00000102360 75 ntBASIC1,8□□□□□ -2,12
Sox1P53783 Gm14923-201ENSMUST00000118270 155 ntBASIC1,8□□□□□ -2,12
Sox1P53783 Gm22732-201ENSMUST00000158093 121 ntBASIC1,8□□□□□ -2,12
Sox1P53783 Gm25901-201ENSMUST00000158494 130 ntBASIC1,8□□□□□ -2,12
Sox1P53783 Gm44948-201ENSMUST00000209050 149 ntBASIC1,8□□□□□ -2,12
Sox1P53783 AC129085.5-201ENSMUST00000225468 400 ntBASIC1,8□□□□□ -2,12
Sox1P53783 Mir320-201ENSMUST00000083594 82 ntBASIC1,8□□□□□ -2,12
Sox1P53783 Gm23715-201ENSMUST00000157354 106 ntBASIC1,79□□□□□ -2,12
Sox1P53783 Gm23328-201ENSMUST00000157418 132 ntBASIC1,79□□□□□ -2,12
Sox1P53783 Gm25663-201ENSMUST00000157698 135 ntBASIC1,79□□□□□ -2,12
Sox1P53783 Gm24686-201ENSMUST00000157755 93 ntBASIC1,79□□□□□ -2,12
Sox1P53783 Gm24677-201ENSMUST00000158755 150 ntBASIC1,79□□□□□ -2,12
Sox1P53783 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1,79□□□□□ -2,12
Sox1P53783 Mir5117-201ENSMUST00000083226 84 ntBASIC1,79□□□□□ -2,12
Sox1P53783 Gm22544-201ENSMUST00000104349 127 ntBASIC1,78□□□□□ -2,12
Sox1P53783 Gm27415-201ENSMUST00000183720 95 ntBASIC1,78□□□□□ -2,12
Sox1P53783 Gm27987-201ENSMUST00000184023 93 ntBASIC1,78□□□□□ -2,12
Sox1P53783 Mir468-201ENSMUST00000197332 78 ntBASIC1,78□□□□□ -2,12
Sox1P53783 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1,78□□□□□ -2,12
Sox1P53783 Gm23469-201ENSMUST00000157131 104 ntBASIC1,77□□□□□ -2,13
Sox1P53783 Gm37778-201ENSMUST00000191732 190 ntBASIC1,77□□□□□ -2,13
Sox1P53783 Gm44469-201ENSMUST00000198558 79 ntBASIC1,77□□□□□ -2,13
Sox1P53783 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1,76□□□□□ -2,13
Sox1P53783 Mir6950-201ENSMUST00000184438 73 ntBASIC1,76□□□□□ -2,13
Sox1P53783 Gm24494-201ENSMUST00000083804 81 ntBASIC1,76□□□□□ -2,13
Sox1P53783 Gm24445-201ENSMUST00000083981 107 ntBASIC1,76□□□□□ -2,13
Sox1P53783 Gm23708-201ENSMUST00000104367 123 ntBASIC1,75□□□□□ -2,13
Sox1P53783 n-R5s70-201ENSMUST00000122650 116 ntBASIC1,75□□□□□ -2,13
Sox1P53783 Gm24129-201ENSMUST00000158537 97 ntBASIC1,75□□□□□ -2,13
Sox1P53783 AC157602.1-201ENSMUST00000197446 105 ntBASIC1,75□□□□□ -2,13
Sox1P53783 Gm23056-201ENSMUST00000082803 111 ntBASIC1,75□□□□□ -2,13
Sox1P53783 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm25542-201ENSMUST00000116889 94 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm26478-201ENSMUST00000122611 133 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm22067-201ENSMUST00000122790 107 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm24648-201ENSMUST00000157111 132 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm22801-201ENSMUST00000175624 84 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm25740-201ENSMUST00000180247 107 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Gm25854-201ENSMUST00000082792 72 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1,74□□□□□ -2,13
Sox1P53783 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1,74□□□□□ -2,13
Sox1P53783 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1,74□□□□□ -2,13
Sox1P53783 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1,73□□□□□ -2,13
Sox1P53783 Mir709-201ENSMUST00000102190 88 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm23661-201ENSMUST00000122630 87 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm24915-201ENSMUST00000157288 78 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm22539-201ENSMUST00000158167 117 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm10548-202ENSMUST00000165672 272 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm43038-201ENSMUST00000202359 88 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm26202-201ENSMUST00000082910 65 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Gm24162-201ENSMUST00000093665 102 ntBASIC1,73□□□□□ -2,13
Sox1P53783 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1,72□□□□□ -2,13
Sox1P53783 Gm22785-201ENSMUST00000104087 132 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Gm25322-201ENSMUST00000122556 104 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Gm22522-201ENSMUST00000158271 151 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Gm22164-201ENSMUST00000158413 106 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Mir30d-201ENSMUST00000083503 82 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Mir196b-201ENSMUST00000083509 85 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Mir29a-201ENSMUST00000083676 88 ntBASIC1,72□□□□□ -2,13
Sox1P53783 Gm24009-201ENSMUST00000157734 93 ntBASIC1,71□□□□□ -2,14
Sox1P53783 Gm23857-201ENSMUST00000158379 111 ntBASIC1,71□□□□□ -2,14
Sox1P53783 Gm27297-201ENSMUST00000183395 105 ntBASIC1,71□□□□□ -2,14
Sox1P53783 Gm44384-201ENSMUST00000200208 114 ntBASIC1,71□□□□□ -2,14
Sox1P53783 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1,7□□□□□ -2,14
Sox1P53783 Gm25110-201ENSMUST00000116684 121 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm24588-201ENSMUST00000116696 83 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm25775-201ENSMUST00000116716 121 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm24795-201ENSMUST00000116737 121 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm25171-201ENSMUST00000116926 121 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm24476-201ENSMUST00000157437 131 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm26181-201ENSMUST00000157687 106 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm24547-201ENSMUST00000158649 149 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm22862-201ENSMUST00000178593 121 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm28435-201ENSMUST00000185496 108 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm29047-201ENSMUST00000189816 108 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm36956-201ENSMUST00000193830 214 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Mir509-201ENSMUST00000196089 75 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm23293-201ENSMUST00000082552 104 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Mir10b-201ENSMUST00000083566 68 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Mir324-201ENSMUST00000083600 89 ntBASIC1,7□□□□□ -2,14
Sox1P53783 Gm22494-201ENSMUST00000104495 128 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Gm23991-201ENSMUST00000117033 93 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1,69□□□□□ -2,14
Sox1P53783 Gm22082-201ENSMUST00000157587 161 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Gm25600-201ENSMUST00000158357 106 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Mir1961-201ENSMUST00000158643 112 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Gm26712-201ENSMUST00000180813 217 ntBASIC1,69□□□□□ -2,14
Sox1P53783 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Mir6390-201ENSMUST00000184405 129 ntBASIC1,69□□□□□ -2,14
Sox1P53783 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1,69□□□□□ -2,14
Sox1P53783 Gm24151-201ENSMUST00000082758 141 ntBASIC1,69□□□□□ -2,14
Retrieved 100 of 76,532 protein–RNA pairs in 133,7 ms