Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25279-201ENSMUST00000122608 133 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm24199-201ENSMUST00000157808 136 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm26038-201ENSMUST00000158151 106 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm22801-201ENSMUST00000175624 84 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm38295-201ENSMUST00000191951 151 ntBASIC1.85□□□□□ -2.11
RaraP11416 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm44469-201ENSMUST00000198558 79 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm24151-201ENSMUST00000082758 141 ntBASIC1.85□□□□□ -2.11
RaraP11416 Gm25417-201ENSMUST00000104212 131 ntBASIC1.84□□□□□ -2.11
RaraP11416 Gm24648-201ENSMUST00000157111 132 ntBASIC1.84□□□□□ -2.11
RaraP11416 Gm22539-201ENSMUST00000158167 117 ntBASIC1.84□□□□□ -2.11
RaraP11416 Gm22386-201ENSMUST00000158192 129 ntBASIC1.84□□□□□ -2.11
RaraP11416 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RaraP11416 Gm26202-201ENSMUST00000082910 65 ntBASIC1.84□□□□□ -2.11
RaraP11416 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
RaraP11416 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24868-201ENSMUST00000157265 136 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24077-201ENSMUST00000158183 136 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24129-201ENSMUST00000158537 97 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm10548-202ENSMUST00000165672 272 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm26712-201ENSMUST00000180813 217 ntBASIC1.83□□□□□ -2.12
RaraP11416 Mir6390-201ENSMUST00000184405 129 ntBASIC1.83□□□□□ -2.12
RaraP11416 Mir509-201ENSMUST00000196089 75 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm43927-201ENSMUST00000204599 117 ntBASIC1.83□□□□□ -2.12
RaraP11416 Gm24494-201ENSMUST00000083804 81 ntBASIC1.83□□□□□ -2.12
RaraP11416 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RaraP11416 Gm26082-201ENSMUST00000104070 127 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25110-201ENSMUST00000116684 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25775-201ENSMUST00000116716 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm24795-201ENSMUST00000116737 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25171-201ENSMUST00000116926 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm24009-201ENSMUST00000157734 93 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm25600-201ENSMUST00000158357 106 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm23857-201ENSMUST00000158379 111 ntBASIC1.82□□□□□ -2.12
RaraP11416 Gm22862-201ENSMUST00000178593 121 ntBASIC1.82□□□□□ -2.12
RaraP11416 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RaraP11416 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RaraP11416 Gm24988-201ENSMUST00000104460 121 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm23109-201ENSMUST00000116867 126 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm24476-201ENSMUST00000157437 131 ntBASIC1.81□□□□□ -2.12
RaraP11416 Mir1961-201ENSMUST00000158643 112 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm25161-201ENSMUST00000158913 132 ntBASIC1.81□□□□□ -2.12
RaraP11416 Mir344-201ENSMUST00000083634 95 ntBASIC1.81□□□□□ -2.12
RaraP11416 Gm11333-201ENSMUST00000119479 148 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm24547-201ENSMUST00000158649 149 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm25974-201ENSMUST00000158701 94 ntBASIC1.8□□□□□ -2.12
RaraP11416 Mir3968-201ENSMUST00000175355 100 ntBASIC1.8□□□□□ -2.12
RaraP11416 Mir7679-201ENSMUST00000183379 63 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm43038-201ENSMUST00000202359 88 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm25798-201ENSMUST00000082641 107 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm24165-201ENSMUST00000082718 128 ntBASIC1.8□□□□□ -2.12
RaraP11416 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.8□□□□□ -2.12
RaraP11416 Gm22164-201ENSMUST00000158413 106 ntBASIC1.79□□□□□ -2.12
RaraP11416 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm27297-201ENSMUST00000183395 105 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm27326-201ENSMUST00000183504 95 ntBASIC1.79□□□□□ -2.12
RaraP11416 Mir6351-201ENSMUST00000183826 99 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm27248-201ENSMUST00000184004 166 ntBASIC1.79□□□□□ -2.12
RaraP11416 Mir6394-201ENSMUST00000184738 99 ntBASIC1.79□□□□□ -2.12
RaraP11416 Gm36956-201ENSMUST00000193830 214 ntBASIC1.79□□□□□ -2.12
RaraP11416 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.79□□□□□ -2.12
RaraP11416 Mir709-201ENSMUST00000102190 88 ntBASIC1.78□□□□□ -2.12
RaraP11416 Mir758-201ENSMUST00000103260 81 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm25056-201ENSMUST00000157372 62 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm22603-201ENSMUST00000157603 96 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm24394-201ENSMUST00000158141 123 ntBASIC1.78□□□□□ -2.12
RaraP11416 Mir669n-201ENSMUST00000158636 54 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm28435-201ENSMUST00000185496 108 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm29047-201ENSMUST00000189816 108 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm44384-201ENSMUST00000200208 114 ntBASIC1.78□□□□□ -2.12
RaraP11416 Gm26207-201ENSMUST00000082909 104 ntBASIC1.78□□□□□ -2.12
RaraP11416 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
RaraP11416 Gm25787-201ENSMUST00000104709 92 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.77□□□□□ -2.13
RaraP11416 Gm26181-201ENSMUST00000157687 106 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24677-201ENSMUST00000158755 150 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24174-201ENSMUST00000158933 111 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm26158-201ENSMUST00000158973 119 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24495-201ENSMUST00000178575 79 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm22253-201ENSMUST00000179870 79 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm24406-201ENSMUST00000083026 128 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm22753-201ENSMUST00000083657 107 ntBASIC1.77□□□□□ -2.13
RaraP11416 Gm22469-201ENSMUST00000104118 133 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm12432-201ENSMUST00000119540 186 ntBASIC1.76□□□□□ -2.13
RaraP11416 U6.1-201ENSMUST00000157443 101 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm27511-201ENSMUST00000183502 127 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm44488-201ENSMUST00000199467 119 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm44396-201ENSMUST00000199843 114 ntBASIC1.76□□□□□ -2.13
RaraP11416 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.76□□□□□ -2.13
RaraP11416 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm22785-201ENSMUST00000104087 132 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm23761-201ENSMUST00000158347 104 ntBASIC1.75□□□□□ -2.13
RaraP11416 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.75□□□□□ -2.13
RaraP11416 Mir6985-201ENSMUST00000184641 61 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm24445-201ENSMUST00000083981 107 ntBASIC1.75□□□□□ -2.13
RaraP11416 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.75□□□□□ -2.13
RaraP11416 Gm27993-201ENSMUST00000184362 85 ntBASIC1.74□□□□□ -2.13
RaraP11416 Gm28383-201ENSMUST00000187563 139 ntBASIC1.74□□□□□ -2.13
RaraP11416 Gm43911-201ENSMUST00000203097 76 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms