Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-0.94□□□□□ -2.56
Col1a1P11087 Gm23191-201ENSMUST00000179147 107 ntBASIC-0.94□□□□□ -2.56
Col1a1P11087 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.94□□□□□ -2.56
Col1a1P11087 Mir136-201ENSMUST00000199494 62 ntBASIC-0.94□□□□□ -2.56
Col1a1P11087 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.94□□□□□ -2.56
Col1a1P11087 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.94□□□□□ -2.56
Col1a1P11087 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm43324-201ENSMUST00000197482 289 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm25684-201ENSMUST00000083941 107 ntBASIC-0.95□□□□□ -2.56
Col1a1P11087 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
Col1a1P11087 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
Col1a1P11087 AL929265.1-201ENSMUST00000213427 125 ntBASIC-0.96□□□□□ -2.56
Col1a1P11087 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.96□□□□□ -2.56
Col1a1P11087 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm24962-201ENSMUST00000157917 109 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm23261-201ENSMUST00000158316 136 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm27957-201ENSMUST00000184054 127 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 AC116589.3-202ENSMUST00000221770 649 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 AC116589.6-201ENSMUST00000222252 649 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.97□□□□□ -2.56
Col1a1P11087 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Gm18502-201ENSMUST00000218679 199 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Mir122-201ENSMUST00000083468 66 ntBASIC-0.98□□□□□ -2.57
Col1a1P11087 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm22841-201ENSMUST00000158443 62 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Mir451b-201ENSMUST00000196157 72 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm45125-201ENSMUST00000206908 151 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm22479-201ENSMUST00000122566 81 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Col1a1P11087 AC122327.1-201ENSMUST00000220778 108 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 AC132833.2-201ENSMUST00000228699 157 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Col1a1P11087 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Mir146-201ENSMUST00000083667 65 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.99□□□□□ -2.57
Col1a1P11087 Mir702-201ENSMUST00000102285 109 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Mir802-201ENSMUST00000103258 97 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-1□□□□□ -2.57
Col1a1P11087 Gm23212-201ENSMUST00000122718 60 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm22557-201ENSMUST00000157804 102 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm27699-201ENSMUST00000183553 180 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm27263-201ENSMUST00000184760 76 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm42677-201ENSMUST00000196363 127 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-1□□□□□ -2.57
Col1a1P11087 AC165157.3-201ENSMUST00000220815 103 ntBASIC-1□□□□□ -2.57
Col1a1P11087 AC154390.1-201ENSMUST00000225629 277 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm22502-201ENSMUST00000082488 107 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm22977-201ENSMUST00000082615 107 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm24202-201ENSMUST00000082948 103 ntBASIC-1□□□□□ -2.57
Col1a1P11087 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.01□□□□□ -2.57
Col1a1P11087 Gm25014-201ENSMUST00000158401 103 ntBASIC-1.01□□□□□ -2.57
Col1a1P11087 Gm25653-201ENSMUST00000158473 138 ntBASIC-1.01□□□□□ -2.57
Col1a1P11087 Cfap61-214ENSMUST00000167179 183 ntBASIC-1.01□□□□□ -2.57
Col1a1P11087 Mir509-201ENSMUST00000196089 75 ntBASIC-1.01□□□□□ -2.57
Col1a1P11087 AC154552.1-201ENSMUST00000222969 202 ntBASIC-1.01□□□□□ -2.57
Col1a1P11087 Gm23607-201ENSMUST00000104550 126 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Gm14502-201ENSMUST00000118154 113 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Gm22708-201ENSMUST00000158987 103 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Gm27285-201ENSMUST00000183875 127 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-1.02□□□□□ -2.57
Col1a1P11087 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-1.02□□□□□ -2.57
Col1a1P11087 Gm23080-201ENSMUST00000157846 103 ntBASIC-1.03□□□□□ -2.57
Col1a1P11087 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.03□□□□□ -2.57
Col1a1P11087 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.03□□□□□ -2.57
Col1a1P11087 Mir488-201ENSMUST00000093595 109 ntBASIC-1.03□□□□□ -2.57
Col1a1P11087 Gm23214-201ENSMUST00000122716 157 ntBASIC-1.04□□□□□ -2.58
Col1a1P11087 Gm24241-201ENSMUST00000157787 145 ntBASIC-1.04□□□□□ -2.58
Col1a1P11087 Gm23351-201ENSMUST00000158427 125 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 145.4 ms