Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm28559-201ENSMUST00000190532 139 ntBASIC1,9□□□□□ -2,11
Trim13Q9CYB0 Gm24927-201ENSMUST00000083397 107 ntBASIC1,9□□□□□ -2,11
Trim13Q9CYB0 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1,9□□□□□ -2,11
Trim13Q9CYB0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1,9□□□□□ -2,11
Trim13Q9CYB0 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm22544-201ENSMUST00000104349 127 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm25622-201ENSMUST00000157217 104 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm22039-201ENSMUST00000157278 132 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm22944-201ENSMUST00000158662 133 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Snord87-201ENSMUST00000175437 87 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm23963-201ENSMUST00000179603 77 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm27722-201ENSMUST00000183908 76 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Mir494-201ENSMUST00000093632 85 ntBASIC1,89□□□□□ -2,11
Trim13Q9CYB0 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Gm26015-201ENSMUST00000104402 125 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Gm26257-201ENSMUST00000122500 107 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Gm24648-201ENSMUST00000157111 132 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Gm23763-201ENSMUST00000158345 60 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Mir7068-201ENSMUST00000183439 74 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Mir7016-201ENSMUST00000184308 72 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Mir6419-201ENSMUST00000184784 113 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Gm22753-201ENSMUST00000083657 107 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1,88□□□□□ -2,11
Trim13Q9CYB0 Gm27450-201ENSMUST00000104632 90 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Mir1899-201ENSMUST00000122798 96 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm24237-201ENSMUST00000157790 132 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm22159-201ENSMUST00000158412 130 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm26029-201ENSMUST00000158659 132 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm23342-201ENSMUST00000158958 115 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Mir6950-201ENSMUST00000184438 73 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm38295-201ENSMUST00000191951 151 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Snord45b-201ENSMUST00000082797 71 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm25186-201ENSMUST00000083909 108 ntBASIC1,87□□□□□ -2,11
Trim13Q9CYB0 Gm26342-201ENSMUST00000104557 129 ntBASIC1,86□□□□□ -2,11
Trim13Q9CYB0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1,86□□□□□ -2,11
Trim13Q9CYB0 Gm23630-201ENSMUST00000175292 104 ntBASIC1,86□□□□□ -2,11
Trim13Q9CYB0 Mir126a-201ENSMUST00000083606 73 ntBASIC1,86□□□□□ -2,11
Trim13Q9CYB0 Gm25652-201ENSMUST00000083780 103 ntBASIC1,86□□□□□ -2,11
Trim13Q9CYB0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Gm23950-201ENSMUST00000104026 129 ntBASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Gm24984-201ENSMUST00000104454 133 ntBASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Gm24783-201ENSMUST00000157639 100 ntBASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Gm26139-201ENSMUST00000180098 107 ntBASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Gm27399-201ENSMUST00000184250 78 ntBASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1,85□□□□□ -2,11
Trim13Q9CYB0 Gm25991-201ENSMUST00000102439 99 ntBASIC1,84□□□□□ -2,11
Trim13Q9CYB0 U6.1-201ENSMUST00000157443 101 ntBASIC1,84□□□□□ -2,11
Trim13Q9CYB0 Gm24547-201ENSMUST00000158649 149 ntBASIC1,84□□□□□ -2,11
Trim13Q9CYB0 Mir3103-201ENSMUST00000175474 67 ntBASIC1,84□□□□□ -2,11
Trim13Q9CYB0 Gm44477-201ENSMUST00000199661 110 ntBASIC1,84□□□□□ -2,11
Trim13Q9CYB0 Mir497-201ENSMUST00000200557 84 ntBASIC1,84□□□□□ -2,11
Trim13Q9CYB0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Gm24725-201ENSMUST00000158229 125 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Gm23208-201ENSMUST00000158666 127 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Gm24366-201ENSMUST00000175383 86 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Mir5118-201ENSMUST00000175551 67 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Mir6995-201ENSMUST00000183658 71 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 AC129085.5-201ENSMUST00000225468 400 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Gm24165-201ENSMUST00000082718 128 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Gm24151-201ENSMUST00000082758 141 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Snord60-201ENSMUST00000082834 78 ntBASIC1,83□□□□□ -2,12
Trim13Q9CYB0 Gm25524-201ENSMUST00000101821 107 ntBASIC1,82□□□□□ -2,12
Trim13Q9CYB0 Gm23661-201ENSMUST00000122630 87 ntBASIC1,82□□□□□ -2,12
Trim13Q9CYB0 Gm25658-201ENSMUST00000158472 128 ntBASIC1,82□□□□□ -2,12
Trim13Q9CYB0 Mir7241-201ENSMUST00000184532 64 ntBASIC1,82□□□□□ -2,12
Trim13Q9CYB0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Gm25642-201ENSMUST00000175137 66 ntBASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Gm22887-201ENSMUST00000178586 107 ntBASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Gm27511-201ENSMUST00000183502 127 ntBASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Gm26202-201ENSMUST00000082910 65 ntBASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Gm24134-201ENSMUST00000083361 71 ntBASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1,81□□□□□ -2,12
Trim13Q9CYB0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Gm25094-201ENSMUST00000103992 131 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Gm23881-201ENSMUST00000116872 66 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Gm24009-201ENSMUST00000157734 93 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Gm22727-201ENSMUST00000158090 116 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Mir3057-201ENSMUST00000175040 91 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Gm25707-201ENSMUST00000175120 96 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Mir378a-201ENSMUST00000198300 66 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Gm24202-201ENSMUST00000082948 103 ntBASIC1,8□□□□□ -2,12
Trim13Q9CYB0 Mir344e-201ENSMUST00000104677 66 ntBASIC1,79□□□□□ -2,12
Trim13Q9CYB0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1,79□□□□□ -2,12
Trim13Q9CYB0 Gm6985-201ENSMUST00000121255 271 ntBASIC1,79□□□□□ -2,12
Trim13Q9CYB0 Gm24401-201ENSMUST00000157868 91 ntBASIC1,79□□□□□ -2,12
Trim13Q9CYB0 Gm25730-201ENSMUST00000178753 165 ntBASIC1,79□□□□□ -2,12
Trim13Q9CYB0 Gm43484-201ENSMUST00000198333 5966 ntBASIC1,79□□□□□ -2,12
Trim13Q9CYB0 Gm43885-201ENSMUST00000204928 2542 ntBASIC1,78□□□□□ -2,12
Trim13Q9CYB0 Mir741-201ENSMUST00000103931 71 ntBASIC1,78□□□□□ -2,12
Trim13Q9CYB0 Gm23551-201ENSMUST00000116852 121 ntBASIC1,78□□□□□ -2,12
Trim13Q9CYB0 Gm25465-201ENSMUST00000157716 105 ntBASIC1,78□□□□□ -2,12
Trim13Q9CYB0 Gm24728-201ENSMUST00000158226 125 ntBASIC1,78□□□□□ -2,12
Trim13Q9CYB0 Gm23072-201ENSMUST00000158243 123 ntBASIC1,78□□□□□ -2,12
Trim13Q9CYB0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1,78□□□□□ -2,12
Trim13Q9CYB0 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1,78□□□□□ -2,13
Retrieved 100 of 76,532 protein–RNA pairs in 127,2 ms