Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm23477-201ENSMUST00000158882 128 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Mir509-201ENSMUST00000196089 75 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Gm44602-201ENSMUST00000205948 132 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Gm24406-201ENSMUST00000083026 128 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Mir222-201ENSMUST00000083537 79 ntBASIC2.14□□□□□ -2.07
Trim11Q99PQ2 Gm25609-201ENSMUST00000104019 104 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Gm24401-201ENSMUST00000157868 91 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Gm25552-201ENSMUST00000158081 91 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Gm23763-201ENSMUST00000158345 60 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Gm22944-201ENSMUST00000158662 133 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Mir3064-201ENSMUST00000175532 67 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Gm24311-201ENSMUST00000082570 104 ntBASIC2.13□□□□□ -2.07
Trim11Q99PQ2 Gm15536-201ENSMUST00000121411 114 ntBASIC2.12□□□□□ -2.07
Trim11Q99PQ2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim11Q99PQ2 Gm23963-201ENSMUST00000179603 77 ntBASIC2.12□□□□□ -2.07
Trim11Q99PQ2 Gm43927-201ENSMUST00000204599 117 ntBASIC2.12□□□□□ -2.07
Trim11Q99PQ2 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim11Q99PQ2 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.12□□□□□ -2.07
Trim11Q99PQ2 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Mir1899-201ENSMUST00000122798 96 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Gm24221-201ENSMUST00000158833 313 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Mir3057-201ENSMUST00000175040 91 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Mir7021-201ENSMUST00000197026 63 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Gm24151-201ENSMUST00000082758 141 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Snord7-201ENSMUST00000083781 97 ntBASIC2.11□□□□□ -2.07
Trim11Q99PQ2 Gm24648-201ENSMUST00000157111 132 ntBASIC2.1□□□□□ -2.07
Trim11Q99PQ2 Mir5104-201ENSMUST00000175319 94 ntBASIC2.1□□□□□ -2.07
Trim11Q99PQ2 Gm25730-201ENSMUST00000178753 165 ntBASIC2.1□□□□□ -2.07
Trim11Q99PQ2 Mir7241-201ENSMUST00000184532 64 ntBASIC2.1□□□□□ -2.07
Trim11Q99PQ2 Gm24783-201ENSMUST00000157639 100 ntBASIC2.09□□□□□ -2.07
Trim11Q99PQ2 Snord60-201ENSMUST00000082834 78 ntBASIC2.09□□□□□ -2.07
Trim11Q99PQ2 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trim11Q99PQ2 Gm22544-201ENSMUST00000104349 127 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Gm25496-201ENSMUST00000104430 120 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Gm24984-201ENSMUST00000104454 133 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Mir3092-201ENSMUST00000174954 96 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Gm25642-201ENSMUST00000175137 66 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Gm22914-201ENSMUST00000175195 77 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Gm26712-201ENSMUST00000180813 217 ntBASIC2.08□□□□□ -2.08
Trim11Q99PQ2 Gm12469-201ENSMUST00000117623 207 ntBASIC2.07□□□□□ -2.08
Trim11Q99PQ2 Gm22413-201ENSMUST00000175465 85 ntBASIC2.07□□□□□ -2.08
Trim11Q99PQ2 Gm22887-201ENSMUST00000178586 107 ntBASIC2.07□□□□□ -2.08
Trim11Q99PQ2 Mir7678-201ENSMUST00000185076 71 ntBASIC2.07□□□□□ -2.08
Trim11Q99PQ2 Gm23100-201ENSMUST00000083455 141 ntBASIC2.07□□□□□ -2.08
Trim11Q99PQ2 Gm25756-201ENSMUST00000103990 136 ntBASIC2.06□□□□□ -2.08
Trim11Q99PQ2 Gm25619-201ENSMUST00000122621 104 ntBASIC2.06□□□□□ -2.08
Trim11Q99PQ2 Gm25622-201ENSMUST00000157217 104 ntBASIC2.06□□□□□ -2.08
Trim11Q99PQ2 U6.1-201ENSMUST00000157443 101 ntBASIC2.05□□□□□ -2.08
Trim11Q99PQ2 Gm22666-201ENSMUST00000158717 164 ntBASIC2.05□□□□□ -2.08
Trim11Q99PQ2 Gm22403-201ENSMUST00000174919 84 ntBASIC2.05□□□□□ -2.08
Trim11Q99PQ2 Gm37778-201ENSMUST00000191732 190 ntBASIC2.05□□□□□ -2.08
Trim11Q99PQ2 Mir378a-201ENSMUST00000198300 66 ntBASIC2.05□□□□□ -2.08
Trim11Q99PQ2 Gm23881-201ENSMUST00000116872 66 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Gm22227-201ENSMUST00000157356 259 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Gm24728-201ENSMUST00000158226 125 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Gm26359-201ENSMUST00000158873 101 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Mir3061-201ENSMUST00000175129 91 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Mir7068-201ENSMUST00000183439 74 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Gm38295-201ENSMUST00000191951 151 ntBASIC2.04□□□□□ -2.08
Trim11Q99PQ2 Gm23661-201ENSMUST00000122630 87 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Gm24331-201ENSMUST00000175099 67 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Mir5118-201ENSMUST00000175551 67 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Gm23801-201ENSMUST00000175561 67 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Gm24485-201ENSMUST00000178283 67 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Gm45754-201ENSMUST00000212380 279 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Gm22753-201ENSMUST00000083657 107 ntBASIC2.03□□□□□ -2.08
Trim11Q99PQ2 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Trim11Q99PQ2 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.02□□□□□ -2.09
Trim11Q99PQ2 Gm24009-201ENSMUST00000157734 93 ntBASIC2.02□□□□□ -2.09
Trim11Q99PQ2 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.02□□□□□ -2.09
Trim11Q99PQ2 Gm27511-201ENSMUST00000183502 127 ntBASIC2.02□□□□□ -2.09
Trim11Q99PQ2 Gm25636-201ENSMUST00000082666 133 ntBASIC2.02□□□□□ -2.09
Trim11Q99PQ2 Gm26202-201ENSMUST00000082910 65 ntBASIC2.02□□□□□ -2.09
Trim11Q99PQ2 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trim11Q99PQ2 Gm24547-201ENSMUST00000158649 149 ntBASIC2.01□□□□□ -2.09
Trim11Q99PQ2 Gm25991-201ENSMUST00000102439 99 ntBASIC2□□□□□ -2.09
Trim11Q99PQ2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2□□□□□ -2.09
Trim11Q99PQ2 Gm25035-201ENSMUST00000175414 77 ntBASIC2□□□□□ -2.09
Trim11Q99PQ2 Gm27517-201ENSMUST00000184347 236 ntBASIC2□□□□□ -2.09
Trim11Q99PQ2 AC157278.1-201ENSMUST00000221621 148 ntBASIC2□□□□□ -2.09
Trim11Q99PQ2 Mir322-201ENSMUST00000083484 95 ntBASIC2□□□□□ -2.09
Trim11Q99PQ2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.99□□□□□ -2.09
Trim11Q99PQ2 Gm24129-201ENSMUST00000158537 97 ntBASIC1.99□□□□□ -2.09
Trim11Q99PQ2 Gm27297-201ENSMUST00000183395 105 ntBASIC1.99□□□□□ -2.09
Trim11Q99PQ2 Gm44469-201ENSMUST00000198558 79 ntBASIC1.99□□□□□ -2.09
Trim11Q99PQ2 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Gm25056-201ENSMUST00000157372 62 ntBASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Gm23856-201ENSMUST00000158380 99 ntBASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Gm26029-201ENSMUST00000158659 132 ntBASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Gm22011-201ENSMUST00000158790 123 ntBASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Gm24202-201ENSMUST00000082948 103 ntBASIC1.98□□□□□ -2.09
Trim11Q99PQ2 Mir873a-201ENSMUST00000104863 77 ntBASIC1.97□□□□□ -2.09
Trim11Q99PQ2 Gm25974-201ENSMUST00000158701 94 ntBASIC1.97□□□□□ -2.09
Trim11Q99PQ2 Gm26158-201ENSMUST00000158973 119 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms