Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm23986-201ENSMUST00000157144 63 ntBASIC1.47□□□□□ -2.17
Ushbp1Q8R370 Gm23384-201ENSMUST00000158593 103 ntBASIC1.47□□□□□ -2.17
Ushbp1Q8R370 Gm23636-201ENSMUST00000175070 95 ntBASIC1.47□□□□□ -2.17
Ushbp1Q8R370 Mir532-201ENSMUST00000093630 96 ntBASIC1.47□□□□□ -2.17
Ushbp1Q8R370 Gm22004-201ENSMUST00000101884 107 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Snord78-201ENSMUST00000104032 66 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Gm25544-201ENSMUST00000122676 120 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Gm25887-201ENSMUST00000157777 84 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Mir21c-201ENSMUST00000184910 78 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Gm20118-201ENSMUST00000187207 162 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Gm22809-201ENSMUST00000082743 156 ntBASIC1.46□□□□□ -2.18
Ushbp1Q8R370 Scarna9-201ENSMUST00000104318 70 ntBASIC1.45□□□□□ -2.18
Ushbp1Q8R370 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ushbp1Q8R370 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.45□□□□□ -2.18
Ushbp1Q8R370 Mir196b-201ENSMUST00000083509 85 ntBASIC1.45□□□□□ -2.18
Ushbp1Q8R370 Gm22319-201ENSMUST00000157147 122 ntBASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm24877-201ENSMUST00000158779 116 ntBASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Mir468-201ENSMUST00000197332 78 ntBASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Gm24445-201ENSMUST00000083981 107 ntBASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Snora2b-201ENSMUST00000084005 137 ntBASIC1.44□□□□□ -2.18
Ushbp1Q8R370 Mir20b-201ENSMUST00000102087 80 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Gm26421-201ENSMUST00000104279 132 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Gm14039-201ENSMUST00000118705 101 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Gm23351-201ENSMUST00000158427 125 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Gm23114-201ENSMUST00000158478 117 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Gm44948-201ENSMUST00000209050 149 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ushbp1Q8R370 Mir802-201ENSMUST00000103258 97 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm24808-201ENSMUST00000157993 118 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm26358-201ENSMUST00000158215 97 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm24947-201ENSMUST00000158334 110 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm23339-201ENSMUST00000158962 139 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm25128-201ENSMUST00000083339 76 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Mir324-201ENSMUST00000083600 89 ntBASIC1.42□□□□□ -2.18
Ushbp1Q8R370 Gm23991-201ENSMUST00000117033 93 ntBASIC1.41□□□□□ -2.18
Ushbp1Q8R370 Gm25768-201ENSMUST00000158570 98 ntBASIC1.41□□□□□ -2.18
Ushbp1Q8R370 Gm26029-201ENSMUST00000158659 132 ntBASIC1.41□□□□□ -2.18
Ushbp1Q8R370 Mir7063-201ENSMUST00000184158 91 ntBASIC1.41□□□□□ -2.18
Ushbp1Q8R370 Mir7079-201ENSMUST00000184697 69 ntBASIC1.41□□□□□ -2.18
Ushbp1Q8R370 Gm44396-201ENSMUST00000199843 114 ntBASIC1.41□□□□□ -2.18
Ushbp1Q8R370 Gm24865-201ENSMUST00000103246 96 ntBASIC1.4□□□□□ -2.19
Ushbp1Q8R370 Gm11857-201ENSMUST00000119817 324 ntBASIC1.4□□□□□ -2.19
Ushbp1Q8R370 Gm22663-201ENSMUST00000158721 102 ntBASIC1.4□□□□□ -2.19
Ushbp1Q8R370 Mir10b-201ENSMUST00000083566 68 ntBASIC1.4□□□□□ -2.19
Ushbp1Q8R370 Mir211-201ENSMUST00000083651 106 ntBASIC1.4□□□□□ -2.19
Ushbp1Q8R370 Gm22233-201ENSMUST00000157464 114 ntBASIC1.39□□□□□ -2.19
Ushbp1Q8R370 Gm25868-201ENSMUST00000158253 114 ntBASIC1.39□□□□□ -2.19
Ushbp1Q8R370 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ushbp1Q8R370 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.39□□□□□ -2.19
Ushbp1Q8R370 Gm24401-201ENSMUST00000157868 91 ntBASIC1.38□□□□□ -2.19
Ushbp1Q8R370 Gm28767-201ENSMUST00000188601 114 ntBASIC1.38□□□□□ -2.19
Ushbp1Q8R370 Trbv25-201ENSMUST00000194700 273 ntBASIC1.38□□□□□ -2.19
Ushbp1Q8R370 Gm24252-201ENSMUST00000083700 132 ntBASIC1.38□□□□□ -2.19
Ushbp1Q8R370 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Gm24271-201ENSMUST00000102327 111 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Mir764-201ENSMUST00000103259 108 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Gm23601-201ENSMUST00000157259 131 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Mir1961-201ENSMUST00000158643 112 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Gm22887-201ENSMUST00000178586 107 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Gm26398-201ENSMUST00000179015 127 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Gm24524-201ENSMUST00000082925 170 ntBASIC1.37□□□□□ -2.19
Ushbp1Q8R370 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ushbp1Q8R370 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.36□□□□□ -2.19
Ushbp1Q8R370 Gm23783-201ENSMUST00000157941 102 ntBASIC1.36□□□□□ -2.19
Ushbp1Q8R370 Gm26290-201ENSMUST00000158891 145 ntBASIC1.36□□□□□ -2.19
Ushbp1Q8R370 Mir450b-201ENSMUST00000102095 82 ntBASIC1.35□□□□□ -2.19
Ushbp1Q8R370 Mir1191-201ENSMUST00000116883 120 ntBASIC1.35□□□□□ -2.19
Ushbp1Q8R370 Gm22485-201ENSMUST00000157990 109 ntBASIC1.35□□□□□ -2.19
Ushbp1Q8R370 Gm24223-201ENSMUST00000158827 90 ntBASIC1.35□□□□□ -2.19
Ushbp1Q8R370 Gm22801-201ENSMUST00000175624 84 ntBASIC1.35□□□□□ -2.19
Ushbp1Q8R370 Gm43977-201ENSMUST00000203970 189 ntBASIC1.35□□□□□ -2.19
Ushbp1Q8R370 Mir709-201ENSMUST00000102190 88 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 Gm23708-201ENSMUST00000104367 123 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 Mir1899-201ENSMUST00000122798 96 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 Gm25715-201ENSMUST00000158627 125 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 Gm24221-201ENSMUST00000158833 313 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.34□□□□□ -2.19
Ushbp1Q8R370 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.34□□□□□ -2.2
Ushbp1Q8R370 Gm23130-201ENSMUST00000104252 74 ntBASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Gm26369-201ENSMUST00000157825 100 ntBASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Gm24728-201ENSMUST00000158226 125 ntBASIC1.33□□□□□ -2.2
Ushbp1Q8R370 Gm24942-201ENSMUST00000158328 114 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms