Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir7017-201ENSMUST00000184894 62 ntBASIC2.42□□□□□ -2.02
Trim47Q8C0E3 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.42□□□□□ -2.02
Trim47Q8C0E3 Gm5581-201ENSMUST00000072940 2550 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm25300-201ENSMUST00000175284 84 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Gm24366-201ENSMUST00000175383 86 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.41□□□□□ -2.02
Trim47Q8C0E3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm26257-201ENSMUST00000122500 107 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm22944-201ENSMUST00000158662 133 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm24177-201ENSMUST00000158927 131 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm43512-201ENSMUST00000198495 176 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 AC157278.1-201ENSMUST00000221621 148 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm24201-201ENSMUST00000082946 125 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Mir300-201ENSMUST00000083485 79 ntBASIC2.4□□□□□ -2.03
Trim47Q8C0E3 Gm25756-201ENSMUST00000103990 136 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Gm22093-201ENSMUST00000158980 111 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Mir7241-201ENSMUST00000184532 64 ntBASIC2.39□□□□□ -2.03
Trim47Q8C0E3 Mir1899-201ENSMUST00000122798 96 ntBASIC2.38□□□□□ -2.03
Trim47Q8C0E3 Gm26359-201ENSMUST00000158873 101 ntBASIC2.38□□□□□ -2.03
Trim47Q8C0E3 Mir3086-201ENSMUST00000175072 87 ntBASIC2.38□□□□□ -2.03
Trim47Q8C0E3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.38□□□□□ -2.03
Trim47Q8C0E3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Gm25991-201ENSMUST00000102439 99 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Gm23208-201ENSMUST00000158666 127 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Mir494-201ENSMUST00000093632 85 ntBASIC2.37□□□□□ -2.03
Trim47Q8C0E3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm22544-201ENSMUST00000104349 127 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm23170-201ENSMUST00000157158 106 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm25113-201ENSMUST00000157185 143 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm22914-201ENSMUST00000175195 77 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Mir3069-201ENSMUST00000198802 65 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Gm43927-201ENSMUST00000204599 117 ntBASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim47Q8C0E3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Gm25056-201ENSMUST00000157372 62 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Gm25636-201ENSMUST00000082666 133 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Mir222-201ENSMUST00000083537 79 ntBASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trim47Q8C0E3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trim47Q8C0E3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm12469-201ENSMUST00000117623 207 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm11857-201ENSMUST00000119817 324 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm23661-201ENSMUST00000122630 87 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm24401-201ENSMUST00000157868 91 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm26029-201ENSMUST00000158659 132 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm27722-201ENSMUST00000183908 76 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Gm27979-201ENSMUST00000185126 56 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Snord45b-201ENSMUST00000082797 71 ntBASIC2.34□□□□□ -2.03
Trim47Q8C0E3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
Trim47Q8C0E3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Gm27450-201ENSMUST00000104632 90 ntBASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Gm24900-201ENSMUST00000158128 134 ntBASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Gm38295-201ENSMUST00000191951 151 ntBASIC2.33□□□□□ -2.04
Trim47Q8C0E3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm23010-201ENSMUST00000104151 126 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Snord60-201ENSMUST00000082834 78 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm22753-201ENSMUST00000083657 107 ntBASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim47Q8C0E3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Gm24009-201ENSMUST00000157734 93 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Mir5104-201ENSMUST00000175319 94 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Mir8116-201ENSMUST00000184134 97 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 Snord43-201ENSMUST00000199549 108 ntBASIC2.31□□□□□ -2.04
Trim47Q8C0E3 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.3□□□□□ -2.04
Trim47Q8C0E3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim47Q8C0E3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim47Q8C0E3 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm23881-201ENSMUST00000116872 66 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm25796-201ENSMUST00000082645 163 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Mir151-201ENSMUST00000083678 68 ntBASIC2.29□□□□□ -2.04
Trim47Q8C0E3 Gm22039-201ENSMUST00000157278 132 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Gm25183-201ENSMUST00000157752 106 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Mir3057-201ENSMUST00000175040 91 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Gm27297-201ENSMUST00000183395 105 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Gm24202-201ENSMUST00000082948 103 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Snora69-201ENSMUST00000083708 131 ntBASIC2.28□□□□□ -2.04
Trim47Q8C0E3 Mir741-201ENSMUST00000103931 71 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm24728-201ENSMUST00000158226 125 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm23289-201ENSMUST00000175615 108 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm22802-201ENSMUST00000175621 89 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Gm23649-201ENSMUST00000179007 107 ntBASIC2.27□□□□□ -2.05
Trim47Q8C0E3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 220.1 ms