Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm23170-201ENSMUST00000157158 106 ntBASIC2□□□□□ -2.09
Pcdh19Q80TF3 Gm26499-201ENSMUST00000178544 79 ntBASIC2□□□□□ -2.09
Pcdh19Q80TF3 Gm26096-201ENSMUST00000179084 79 ntBASIC2□□□□□ -2.09
Pcdh19Q80TF3 Mir7016-201ENSMUST00000184308 72 ntBASIC2□□□□□ -2.09
Pcdh19Q80TF3 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2□□□□□ -2.09
Pcdh19Q80TF3 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Pcdh19Q80TF3 Mir223-201ENSMUST00000102112 110 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Gm23951-201ENSMUST00000104029 132 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Mir1899-201ENSMUST00000122798 96 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Gm26133-201ENSMUST00000157363 100 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Gm22727-201ENSMUST00000158090 116 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Gm25798-201ENSMUST00000082641 107 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Mir29a-201ENSMUST00000083676 88 ntBASIC1.99□□□□□ -2.09
Pcdh19Q80TF3 Mir6390-201ENSMUST00000184405 129 ntBASIC1.98□□□□□ -2.09
Pcdh19Q80TF3 Mir8090-201ENSMUST00000185078 136 ntBASIC1.98□□□□□ -2.09
Pcdh19Q80TF3 Mir7217-201ENSMUST00000200304 62 ntBASIC1.98□□□□□ -2.09
Pcdh19Q80TF3 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Gm22914-201ENSMUST00000175195 77 ntBASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Gm22802-201ENSMUST00000175621 89 ntBASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Gm43512-201ENSMUST00000198495 176 ntBASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Gm6293-201ENSMUST00000050339 195 ntBASIC1.97□□□□□ -2.09
Pcdh19Q80TF3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm23950-201ENSMUST00000104026 129 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm22544-201ENSMUST00000104349 127 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm15692-201ENSMUST00000152173 352 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm23419-201ENSMUST00000175523 84 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm7258-201ENSMUST00000179317 300 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm27443-201ENSMUST00000184660 98 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Mir7017-201ENSMUST00000184894 62 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Gm28767-201ENSMUST00000188601 114 ntBASIC1.96□□□□□ -2.1
Pcdh19Q80TF3 Mir544-201ENSMUST00000103813 78 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 Gm6444-201ENSMUST00000119611 458 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 Gm24378-201ENSMUST00000122699 106 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 Gm28435-201ENSMUST00000185496 108 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 Gm29047-201ENSMUST00000189816 108 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 Gm43038-201ENSMUST00000202359 88 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 Snora69-201ENSMUST00000083708 131 ntBASIC1.95□□□□□ -2.1
Pcdh19Q80TF3 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.94□□□□□ -2.1
Pcdh19Q80TF3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Pcdh19Q80TF3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.94□□□□□ -2.1
Pcdh19Q80TF3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Pcdh19Q80TF3 Gm38295-201ENSMUST00000191951 151 ntBASIC1.94□□□□□ -2.1
Pcdh19Q80TF3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Pcdh19Q80TF3 Gm24177-201ENSMUST00000158927 131 ntBASIC1.93□□□□□ -2.1
Pcdh19Q80TF3 Gm22929-201ENSMUST00000175517 107 ntBASIC1.93□□□□□ -2.1
Pcdh19Q80TF3 Mir509-201ENSMUST00000196089 75 ntBASIC1.93□□□□□ -2.1
Pcdh19Q80TF3 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.93□□□□□ -2.1
Pcdh19Q80TF3 Gm23661-201ENSMUST00000122630 87 ntBASIC1.92□□□□□ -2.1
Pcdh19Q80TF3 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.92□□□□□ -2.1
Pcdh19Q80TF3 Gm25460-201ENSMUST00000157954 127 ntBASIC1.92□□□□□ -2.1
Pcdh19Q80TF3 Mir3064-201ENSMUST00000175532 67 ntBASIC1.92□□□□□ -2.1
Pcdh19Q80TF3 Gm28862-201ENSMUST00000188246 163 ntBASIC1.92□□□□□ -2.1
Pcdh19Q80TF3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.92□□□□□ -2.1
Pcdh19Q80TF3 Gm24396-201ENSMUST00000116905 93 ntBASIC1.91□□□□□ -2.1
Pcdh19Q80TF3 Gm23469-201ENSMUST00000157131 104 ntBASIC1.91□□□□□ -2.1
Pcdh19Q80TF3 Gm25870-201ENSMUST00000179845 79 ntBASIC1.91□□□□□ -2.1
Pcdh19Q80TF3 Snord1a-201ENSMUST00000083160 74 ntBASIC1.91□□□□□ -2.1
Pcdh19Q80TF3 Mir669n-201ENSMUST00000158636 54 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 Mir7675-201ENSMUST00000184262 58 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 Mir7678-201ENSMUST00000185076 71 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 Gm43927-201ENSMUST00000204599 117 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 Gm24151-201ENSMUST00000082758 141 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 Gm22723-201ENSMUST00000083820 129 ntBASIC1.9□□□□□ -2.11
Pcdh19Q80TF3 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Gm23881-201ENSMUST00000116872 66 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Gm12469-201ENSMUST00000117623 207 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Gm24648-201ENSMUST00000157111 132 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Gm23106-201ENSMUST00000157554 101 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Gm26038-201ENSMUST00000158151 106 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Gm25836-201ENSMUST00000158918 123 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Mir7026-201ENSMUST00000184384 67 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.89□□□□□ -2.11
Pcdh19Q80TF3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Mir758-201ENSMUST00000103260 81 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm23109-201ENSMUST00000116867 126 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm25056-201ENSMUST00000157372 62 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Mir6901-201ENSMUST00000185062 62 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm45654-201ENSMUST00000210980 123 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm26922-201ENSMUST00000082687 72 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Snord60-201ENSMUST00000082834 78 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm25650-201ENSMUST00000083784 162 ntBASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Pcdh19Q80TF3 Gm23670-201ENSMUST00000157469 119 ntBASIC1.87□□□□□ -2.11
Pcdh19Q80TF3 Gm24401-201ENSMUST00000157868 91 ntBASIC1.87□□□□□ -2.11
Pcdh19Q80TF3 Gm22099-201ENSMUST00000157925 123 ntBASIC1.87□□□□□ -2.11
Pcdh19Q80TF3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.87□□□□□ -2.11
Pcdh19Q80TF3 Gm25629-201ENSMUST00000084001 107 ntBASIC1.87□□□□□ -2.11
Pcdh19Q80TF3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 158.4 ms