Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm23763-201ENSMUST00000158345 60 ntBASIC1,81□□□□□ -2,12
Trim28Q62318 Gm26290-201ENSMUST00000158891 145 ntBASIC1,81□□□□□ -2,12
Trim28Q62318 Mir3098-201ENSMUST00000175416 87 ntBASIC1,81□□□□□ -2,12
Trim28Q62318 Mir7063-201ENSMUST00000184158 91 ntBASIC1,81□□□□□ -2,12
Trim28Q62318 Gm23299-201ENSMUST00000082708 79 ntBASIC1,81□□□□□ -2,12
Trim28Q62318 Gm22082-201ENSMUST00000157587 161 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Gm25044-201ENSMUST00000158603 104 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Gm24222-201ENSMUST00000158834 93 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1,8□□□□□ -2,12
Trim28Q62318 Gm24575-201ENSMUST00000175502 77 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Gm27419-201ENSMUST00000184576 109 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Mir7665-201ENSMUST00000184907 63 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 AC122335.1-201ENSMUST00000217587 175 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Mir221-201ENSMUST00000083488 95 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Gm24162-201ENSMUST00000093665 102 ntBASIC1,8□□□□□ -2,12
Trim28Q62318 Gm15654-201ENSMUST00000152660 300 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Gm24366-201ENSMUST00000175383 86 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Gm23375-201ENSMUST00000175407 83 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Gm23267-201ENSMUST00000178490 132 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Gm27326-201ENSMUST00000183504 95 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Gm27987-201ENSMUST00000184023 93 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 AC141438.3-201ENSMUST00000215632 202 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 AC159093.2-201ENSMUST00000227881 297 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1,79□□□□□ -2,12
Trim28Q62318 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1,78□□□□□ -2,12
Trim28Q62318 Gm25542-201ENSMUST00000116889 94 ntBASIC1,78□□□□□ -2,12
Trim28Q62318 Gm23761-201ENSMUST00000158347 104 ntBASIC1,78□□□□□ -2,12
Trim28Q62318 Gm25644-201ENSMUST00000083209 107 ntBASIC1,78□□□□□ -2,12
Trim28Q62318 Gm26478-201ENSMUST00000122611 133 ntBASIC1,77□□□□□ -2,13
Trim28Q62318 Gm24384-201ENSMUST00000122693 75 ntBASIC1,77□□□□□ -2,13
Trim28Q62318 Gm16539-201ENSMUST00000160086 327 ntBASIC1,77□□□□□ -2,13
Trim28Q62318 Snora26-201ENSMUST00000175614 121 ntBASIC1,77□□□□□ -2,13
Trim28Q62318 Gm27517-201ENSMUST00000184347 236 ntBASIC1,77□□□□□ -2,13
Trim28Q62318 Gm22205-201ENSMUST00000122655 71 ntBASIC1,76□□□□□ -2,13
Trim28Q62318 Gm22815-201ENSMUST00000157451 62 ntBASIC1,76□□□□□ -2,13
Trim28Q62318 Gm24399-201ENSMUST00000157869 74 ntBASIC1,76□□□□□ -2,13
Trim28Q62318 Mir6419-201ENSMUST00000184784 113 ntBASIC1,76□□□□□ -2,13
Trim28Q62318 Gm22884-201ENSMUST00000083127 140 ntBASIC1,76□□□□□ -2,13
Trim28Q62318 Gm23344-201ENSMUST00000083818 68 ntBASIC1,76□□□□□ -2,13
Trim28Q62318 Gm23208-201ENSMUST00000158666 127 ntBASIC1,75□□□□□ -2,13
Trim28Q62318 Gm28256-201ENSMUST00000188953 139 ntBASIC1,75□□□□□ -2,13
Trim28Q62318 Gm28559-201ENSMUST00000190532 139 ntBASIC1,75□□□□□ -2,13
Trim28Q62318 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1,74□□□□□ -2,13
Trim28Q62318 Mir654-201ENSMUST00000104787 84 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm25322-201ENSMUST00000122556 104 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm23170-201ENSMUST00000157158 106 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm25011-201ENSMUST00000158398 126 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm25241-201ENSMUST00000174909 84 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Mir3057-201ENSMUST00000175040 91 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm26217-201ENSMUST00000175212 84 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm27894-201ENSMUST00000184177 92 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Mir30f-201ENSMUST00000196073 92 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm45197-201ENSMUST00000205288 151 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm44962-201ENSMUST00000206460 279 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm25854-201ENSMUST00000082792 72 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm23376-201ENSMUST00000082938 160 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Mir532-201ENSMUST00000093630 96 ntBASIC1,74□□□□□ -2,13
Trim28Q62318 Gm25417-201ENSMUST00000104212 131 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Scarna9-201ENSMUST00000104318 70 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Gm23826-201ENSMUST00000157394 119 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Gm24262-201ENSMUST00000157431 144 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Gm25949-201ENSMUST00000175333 114 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Gm27686-201ENSMUST00000185123 91 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Gm43911-201ENSMUST00000203097 76 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Mir211-201ENSMUST00000083651 106 ntBASIC1,73□□□□□ -2,13
Trim28Q62318 Gm23060-201ENSMUST00000102345 109 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm25068-201ENSMUST00000103895 110 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm23785-201ENSMUST00000116741 96 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm24509-201ENSMUST00000157086 101 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm25358-201ENSMUST00000157189 101 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm22732-201ENSMUST00000158093 121 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm25618-201ENSMUST00000179484 107 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Gm24165-201ENSMUST00000082718 128 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Snord14a-201ENSMUST00000082807 87 ntBASIC1,72□□□□□ -2,13
Trim28Q62318 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1,72□□□□□ -2,13
Trim28Q62318 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1,71□□□□□ -2,14
Trim28Q62318 Mir343-201ENSMUST00000102360 75 ntBASIC1,71□□□□□ -2,14
Trim28Q62318 Gm16550-201ENSMUST00000162550 126 ntBASIC1,71□□□□□ -2,14
Trim28Q62318 Gm20305-201ENSMUST00000193226 177 ntBASIC1,71□□□□□ -2,14
Trim28Q62318 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1,7□□□□□ -2,14
Trim28Q62318 Gm22149-201ENSMUST00000104442 136 ntBASIC1,7□□□□□ -2,14
Trim28Q62318 Gm25847-201ENSMUST00000116793 96 ntBASIC1,7□□□□□ -2,14
Trim28Q62318 Gm25541-201ENSMUST00000116888 126 ntBASIC1,7□□□□□ -2,14
Trim28Q62318 Gm24199-201ENSMUST00000157808 136 ntBASIC1,7□□□□□ -2,14
Trim28Q62318 Mir7241-201ENSMUST00000184532 64 ntBASIC1,7□□□□□ -2,14
Trim28Q62318 Mir653-201ENSMUST00000102402 85 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm23482-201ENSMUST00000104172 122 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm24988-201ENSMUST00000104460 121 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm22048-201ENSMUST00000104721 89 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm25423-201ENSMUST00000157609 107 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm22944-201ENSMUST00000158662 133 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm24223-201ENSMUST00000158827 90 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm22095-201ENSMUST00000158984 150 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm44602-201ENSMUST00000205948 132 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Mir5117-201ENSMUST00000083226 84 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Gm24523-201ENSMUST00000083965 132 ntBASIC1,69□□□□□ -2,14
Trim28Q62318 Mir20b-201ENSMUST00000102087 80 ntBASIC1,68□□□□□ -2,14
Trim28Q62318 Gm14884-201ENSMUST00000120456 196 ntBASIC1,68□□□□□ -2,14
Trim28Q62318 Gm24895-201ENSMUST00000122742 74 ntBASIC1,68□□□□□ -2,14
Retrieved 100 of 76,532 protein–RNA pairs in 84,9 ms