Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Snord19-201ENSMUST00000104609 76 ntBASIC-0.8□□□□□ -2.54
Upf3bQ3ULL6 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.8□□□□□ -2.54
Upf3bQ3ULL6 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.8□□□□□ -2.54
Upf3bQ3ULL6 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.8□□□□□ -2.54
Upf3bQ3ULL6 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.8□□□□□ -2.54
Upf3bQ3ULL6 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Upf3bQ3ULL6 Mir881-201ENSMUST00000104844 78 ntBASIC-0.81□□□□□ -2.54
Upf3bQ3ULL6 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.81□□□□□ -2.54
Upf3bQ3ULL6 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Upf3bQ3ULL6 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.81□□□□□ -2.54
Upf3bQ3ULL6 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.82□□□□□ -2.54
Upf3bQ3ULL6 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.82□□□□□ -2.54
Upf3bQ3ULL6 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.82□□□□□ -2.54
Upf3bQ3ULL6 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.82□□□□□ -2.54
Upf3bQ3ULL6 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.82□□□□□ -2.54
Upf3bQ3ULL6 Gm22709-201ENSMUST00000116893 111 ntBASIC-0.83□□□□□ -2.54
Upf3bQ3ULL6 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.83□□□□□ -2.54
Upf3bQ3ULL6 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.83□□□□□ -2.54
Upf3bQ3ULL6 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.83□□□□□ -2.54
Upf3bQ3ULL6 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.83□□□□□ -2.54
Upf3bQ3ULL6 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-0.83□□□□□ -2.54
Upf3bQ3ULL6 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.84□□□□□ -2.54
Upf3bQ3ULL6 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.84□□□□□ -2.54
Upf3bQ3ULL6 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.84□□□□□ -2.54
Upf3bQ3ULL6 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.84□□□□□ -2.54
Upf3bQ3ULL6 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Gm17919-201ENSMUST00000173344 312 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Gm29107-201ENSMUST00000190910 347 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.86□□□□□ -2.55
Upf3bQ3ULL6 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
Upf3bQ3ULL6 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.87□□□□□ -2.55
Upf3bQ3ULL6 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.87□□□□□ -2.55
Upf3bQ3ULL6 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.87□□□□□ -2.55
Upf3bQ3ULL6 Mir541-201ENSMUST00000102097 90 ntBASIC-0.88□□□□□ -2.55
Upf3bQ3ULL6 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.88□□□□□ -2.55
Upf3bQ3ULL6 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.88□□□□□ -2.55
Upf3bQ3ULL6 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.88□□□□□ -2.55
Upf3bQ3ULL6 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.88□□□□□ -2.55
Upf3bQ3ULL6 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.88□□□□□ -2.55
Upf3bQ3ULL6 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.89□□□□□ -2.55
Upf3bQ3ULL6 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.89□□□□□ -2.55
Upf3bQ3ULL6 Gm22836-201ENSMUST00000158441 61 ntBASIC-0.89□□□□□ -2.55
Upf3bQ3ULL6 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.89□□□□□ -2.55
Upf3bQ3ULL6 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.89□□□□□ -2.55
Upf3bQ3ULL6 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.9□□□□□ -2.55
Upf3bQ3ULL6 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.9□□□□□ -2.55
Upf3bQ3ULL6 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.9□□□□□ -2.55
Upf3bQ3ULL6 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.9□□□□□ -2.55
Upf3bQ3ULL6 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.91□□□□□ -2.56
Upf3bQ3ULL6 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.92□□□□□ -2.56
Upf3bQ3ULL6 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.92□□□□□ -2.56
Upf3bQ3ULL6 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.92□□□□□ -2.56
Upf3bQ3ULL6 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.92□□□□□ -2.56
Upf3bQ3ULL6 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.92□□□□□ -2.56
Upf3bQ3ULL6 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.93□□□□□ -2.56
Upf3bQ3ULL6 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.93□□□□□ -2.56
Upf3bQ3ULL6 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.93□□□□□ -2.56
Upf3bQ3ULL6 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.93□□□□□ -2.56
Upf3bQ3ULL6 Snord61-201ENSMUST00000083176 71 ntBASIC-0.93□□□□□ -2.56
Upf3bQ3ULL6 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.94□□□□□ -2.56
Upf3bQ3ULL6 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.94□□□□□ -2.56
Upf3bQ3ULL6 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.94□□□□□ -2.56
Upf3bQ3ULL6 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.94□□□□□ -2.56
Upf3bQ3ULL6 Snora62-201ENSMUST00000082991 149 ntBASIC-0.94□□□□□ -2.56
Upf3bQ3ULL6 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.95□□□□□ -2.56
Upf3bQ3ULL6 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.95□□□□□ -2.56
Upf3bQ3ULL6 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.96□□□□□ -2.56
Upf3bQ3ULL6 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.96□□□□□ -2.56
Upf3bQ3ULL6 Gm24047-201ENSMUST00000102405 104 ntBASIC-0.97□□□□□ -2.56
Upf3bQ3ULL6 Snord67-201ENSMUST00000104033 111 ntBASIC-0.97□□□□□ -2.56
Upf3bQ3ULL6 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.97□□□□□ -2.56
Upf3bQ3ULL6 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.97□□□□□ -2.56
Upf3bQ3ULL6 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.97□□□□□ -2.56
Upf3bQ3ULL6 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.98□□□□□ -2.57
Upf3bQ3ULL6 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.98□□□□□ -2.57
Upf3bQ3ULL6 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.98□□□□□ -2.57
Upf3bQ3ULL6 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.99□□□□□ -2.57
Upf3bQ3ULL6 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.99□□□□□ -2.57
Upf3bQ3ULL6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
Upf3bQ3ULL6 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.99□□□□□ -2.57
Upf3bQ3ULL6 AC124739.2-201ENSMUST00000222201 109 ntBASIC-1□□□□□ -2.57
Upf3bQ3ULL6 Gm23679-201ENSMUST00000083161 119 ntBASIC-1□□□□□ -2.57
Upf3bQ3ULL6 Gm43907-201ENSMUST00000203128 117 ntBASIC-1.01□□□□□ -2.57
Upf3bQ3ULL6 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.01□□□□□ -2.57
Upf3bQ3ULL6 mt-Ta-201ENSMUST00000082398 69 ntBASIC-1.01□□□□□ -2.57
Upf3bQ3ULL6 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.01□□□□□ -2.57
Upf3bQ3ULL6 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.01□□□□□ -2.57
Upf3bQ3ULL6 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.02□□□□□ -2.57
Upf3bQ3ULL6 Gm24524-201ENSMUST00000082925 170 ntBASIC-1.02□□□□□ -2.57
Upf3bQ3ULL6 Gm22595-201ENSMUST00000104250 130 ntBASIC-1.03□□□□□ -2.57
Upf3bQ3ULL6 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.03□□□□□ -2.57
Upf3bQ3ULL6 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.03□□□□□ -2.57
Upf3bQ3ULL6 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 151.7 ms