Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm24649-201ENSMUST00000157106 134 ntBASIC1.56□□□□□ -2.16
Rnf180Q3U827 Gm23197-201ENSMUST00000158809 112 ntBASIC1.56□□□□□ -2.16
Rnf180Q3U827 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.56□□□□□ -2.16
Rnf180Q3U827 Gm24468-201ENSMUST00000104489 104 ntBASIC1.55□□□□□ -2.16
Rnf180Q3U827 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.55□□□□□ -2.16
Rnf180Q3U827 Gm22386-201ENSMUST00000158192 129 ntBASIC1.55□□□□□ -2.16
Rnf180Q3U827 Gm23763-201ENSMUST00000158345 60 ntBASIC1.55□□□□□ -2.16
Rnf180Q3U827 Traj60-201ENSMUST00000167781 54 ntBASIC1.55□□□□□ -2.16
Rnf180Q3U827 Mir21c-201ENSMUST00000184910 78 ntBASIC1.55□□□□□ -2.16
Rnf180Q3U827 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Rnf180Q3U827 Snord78-201ENSMUST00000104032 66 ntBASIC1.54□□□□□ -2.16
Rnf180Q3U827 Gm25680-201ENSMUST00000116917 126 ntBASIC1.54□□□□□ -2.16
Rnf180Q3U827 Gm22635-201ENSMUST00000116962 126 ntBASIC1.54□□□□□ -2.16
Rnf180Q3U827 Gm25544-201ENSMUST00000122676 120 ntBASIC1.54□□□□□ -2.16
Rnf180Q3U827 Gm22213-201ENSMUST00000157564 119 ntBASIC1.54□□□□□ -2.16
Rnf180Q3U827 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.54□□□□□ -2.16
Rnf180Q3U827 Gm25992-201ENSMUST00000102437 109 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm25375-201ENSMUST00000158157 135 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm26358-201ENSMUST00000158215 97 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm25901-201ENSMUST00000158494 130 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm24772-201ENSMUST00000158507 110 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm25380-201ENSMUST00000175463 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm24641-201ENSMUST00000178055 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm25484-201ENSMUST00000178217 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm26138-201ENSMUST00000179236 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm22821-201ENSMUST00000179288 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm27420-201ENSMUST00000183823 79 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Mir468-201ENSMUST00000197332 78 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm23298-201ENSMUST00000083181 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm24614-201ENSMUST00000083269 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm22057-201ENSMUST00000083387 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm25516-201ENSMUST00000083857 107 ntBASIC1.53□□□□□ -2.16
Rnf180Q3U827 Gm22004-201ENSMUST00000101884 107 ntBASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm24467-201ENSMUST00000157887 126 ntBASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm22431-201ENSMUST00000158545 107 ntBASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm16399-201ENSMUST00000181423 219 ntBASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.52□□□□□ -2.17
Rnf180Q3U827 Gm23601-201ENSMUST00000157259 131 ntBASIC1.51□□□□□ -2.17
Rnf180Q3U827 Gm24947-201ENSMUST00000158334 110 ntBASIC1.51□□□□□ -2.17
Rnf180Q3U827 Gm24575-201ENSMUST00000175502 77 ntBASIC1.51□□□□□ -2.17
Rnf180Q3U827 Gm44948-201ENSMUST00000209050 149 ntBASIC1.51□□□□□ -2.17
Rnf180Q3U827 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.51□□□□□ -2.17
Rnf180Q3U827 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.51□□□□□ -2.17
Rnf180Q3U827 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Rnf180Q3U827 Scarna9-201ENSMUST00000104318 70 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Snord13-201ENSMUST00000157627 104 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Gm25887-201ENSMUST00000157777 84 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Gm23384-201ENSMUST00000158593 103 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Gm28767-201ENSMUST00000188601 114 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Gm44483-201ENSMUST00000197203 97 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Gm26224-201ENSMUST00000082506 80 ntBASIC1.5□□□□□ -2.17
Rnf180Q3U827 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Rnf180Q3U827 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.49□□□□□ -2.17
Rnf180Q3U827 Gm23986-201ENSMUST00000157144 63 ntBASIC1.49□□□□□ -2.17
Rnf180Q3U827 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.49□□□□□ -2.17
Rnf180Q3U827 Mir27b-201ENSMUST00000083541 73 ntBASIC1.49□□□□□ -2.17
Rnf180Q3U827 Snora2b-201ENSMUST00000084005 137 ntBASIC1.49□□□□□ -2.17
Rnf180Q3U827 Gm24728-201ENSMUST00000158226 125 ntBASIC1.48□□□□□ -2.17
Rnf180Q3U827 Gm23114-201ENSMUST00000158478 117 ntBASIC1.48□□□□□ -2.17
Rnf180Q3U827 Gm22944-201ENSMUST00000158662 133 ntBASIC1.48□□□□□ -2.17
Rnf180Q3U827 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.48□□□□□ -2.17
Rnf180Q3U827 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Rnf180Q3U827 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Rnf180Q3U827 Mir1961-201ENSMUST00000158643 112 ntBASIC1.47□□□□□ -2.17
Rnf180Q3U827 Gm24877-201ENSMUST00000158779 116 ntBASIC1.47□□□□□ -2.17
Rnf180Q3U827 Gm26398-201ENSMUST00000179015 127 ntBASIC1.47□□□□□ -2.17
Rnf180Q3U827 Gm25128-201ENSMUST00000083339 76 ntBASIC1.47□□□□□ -2.17
Rnf180Q3U827 Gm24808-201ENSMUST00000157993 118 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 Gm22089-201ENSMUST00000158336 102 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 Gm25633-201ENSMUST00000178565 107 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 Trbv25-201ENSMUST00000194700 273 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 Gm44396-201ENSMUST00000199843 114 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.46□□□□□ -2.18
Rnf180Q3U827 Mir669f-201ENSMUST00000103850 121 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm23180-201ENSMUST00000158686 125 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm23339-201ENSMUST00000158962 139 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm22862-201ENSMUST00000178593 121 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm27265-201ENSMUST00000183559 77 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm27711-201ENSMUST00000183802 118 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm27248-201ENSMUST00000184004 166 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Gm24920-201ENSMUST00000083018 85 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Mir324-201ENSMUST00000083600 89 ntBASIC1.45□□□□□ -2.18
Rnf180Q3U827 Mir709-201ENSMUST00000102190 88 ntBASIC1.44□□□□□ -2.18
Rnf180Q3U827 Gm13577-201ENSMUST00000121365 205 ntBASIC1.44□□□□□ -2.18
Rnf180Q3U827 Gm22319-201ENSMUST00000157147 122 ntBASIC1.44□□□□□ -2.18
Rnf180Q3U827 Gm23351-201ENSMUST00000158427 125 ntBASIC1.44□□□□□ -2.18
Rnf180Q3U827 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 190.6 ms