Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.33□□□□□ -2.2
Col28a1Q2UY11 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.33□□□□□ -2.2
Col28a1Q2UY11 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.33□□□□□ -2.2
Col28a1Q2UY11 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.33□□□□□ -2.2
Col28a1Q2UY11 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.33□□□□□ -2.2
Col28a1Q2UY11 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Mir764-201ENSMUST00000103259 108 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm25274-201ENSMUST00000104296 135 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm24509-201ENSMUST00000157086 101 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm25358-201ENSMUST00000157189 101 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm25035-201ENSMUST00000175414 77 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Mir3098-201ENSMUST00000175416 87 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm26398-201ENSMUST00000179015 127 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm27493-201ENSMUST00000184128 78 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm20118-201ENSMUST00000187207 162 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm23299-201ENSMUST00000082708 79 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm25038-201ENSMUST00000082928 130 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm23100-201ENSMUST00000083455 141 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Col28a1Q2UY11 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Gm22082-201ENSMUST00000157587 161 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Gm22403-201ENSMUST00000174919 84 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Gm24575-201ENSMUST00000175502 77 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Gm25730-201ENSMUST00000178753 165 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Mir7052-201ENSMUST00000184821 65 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Mir7059-201ENSMUST00000184825 59 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.31□□□□□ -2.2
Col28a1Q2UY11 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Col28a1Q2UY11 Mir223-201ENSMUST00000102112 110 ntBASIC1.3□□□□□ -2.2
Col28a1Q2UY11 Mir343-201ENSMUST00000102360 75 ntBASIC1.3□□□□□ -2.2
Col28a1Q2UY11 Gm16307-201ENSMUST00000161269 210 ntBASIC1.3□□□□□ -2.2
Col28a1Q2UY11 Mir3061-201ENSMUST00000175129 91 ntBASIC1.3□□□□□ -2.2
Col28a1Q2UY11 Mir6237-201ENSMUST00000183808 91 ntBASIC1.3□□□□□ -2.2
Col28a1Q2UY11 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Col28a1Q2UY11 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Mir466l-201ENSMUST00000104866 121 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Gm22983-201ENSMUST00000158308 104 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Gm22914-201ENSMUST00000175195 77 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Gm23917-201ENSMUST00000175256 98 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Gm24154-201ENSMUST00000175261 130 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Gm27517-201ENSMUST00000184347 236 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.29□□□□□ -2.2
Col28a1Q2UY11 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Scarna9-201ENSMUST00000104318 70 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Gm25541-201ENSMUST00000116888 126 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Gm14039-201ENSMUST00000118705 101 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Snord13-201ENSMUST00000157627 104 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Gm24624-201ENSMUST00000082617 164 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Gm23344-201ENSMUST00000083818 68 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Mir532-201ENSMUST00000093630 96 ntBASIC1.28□□□□□ -2.2
Col28a1Q2UY11 Gm24865-201ENSMUST00000103246 96 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm25170-201ENSMUST00000104191 129 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm26301-201ENSMUST00000104813 95 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm23763-201ENSMUST00000158345 60 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm26290-201ENSMUST00000158891 145 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm22802-201ENSMUST00000175621 89 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm22862-201ENSMUST00000178593 121 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm25618-201ENSMUST00000179484 107 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm23410-201ENSMUST00000179967 107 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm44490-201ENSMUST00000198566 127 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm22505-201ENSMUST00000082956 108 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm22363-201ENSMUST00000083100 108 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm23814-201ENSMUST00000083230 102 ntBASIC1.27□□□□□ -2.21
Col28a1Q2UY11 Gm23329-201ENSMUST00000157415 108 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Gm25423-201ENSMUST00000157609 107 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Gm26358-201ENSMUST00000158215 97 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Gm24223-201ENSMUST00000158827 90 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Gm25899-201ENSMUST00000082672 141 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Gm24527-201ENSMUST00000082920 107 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Mir448-201ENSMUST00000083516 112 ntBASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Col28a1Q2UY11 Gm22559-201ENSMUST00000157329 134 ntBASIC1.25□□□□□ -2.21
Col28a1Q2UY11 Gm24637-201ENSMUST00000158674 85 ntBASIC1.25□□□□□ -2.21
Col28a1Q2UY11 Gm26441-201ENSMUST00000082590 104 ntBASIC1.25□□□□□ -2.21
Col28a1Q2UY11 Gm26062-201ENSMUST00000083379 107 ntBASIC1.25□□□□□ -2.21
Col28a1Q2UY11 Mir1191-201ENSMUST00000116883 120 ntBASIC1.24□□□□□ -2.21
Col28a1Q2UY11 Gm14884-201ENSMUST00000120456 196 ntBASIC1.24□□□□□ -2.21
Col28a1Q2UY11 Gm25382-201ENSMUST00000157811 97 ntBASIC1.24□□□□□ -2.21
Col28a1Q2UY11 Gm25936-201ENSMUST00000179952 114 ntBASIC1.24□□□□□ -2.21
Col28a1Q2UY11 Snord14a-201ENSMUST00000082807 87 ntBASIC1.24□□□□□ -2.21
Col28a1Q2UY11 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.24□□□□□ -2.21
Col28a1Q2UY11 Mir544-201ENSMUST00000103813 78 ntBASIC1.23□□□□□ -2.21
Col28a1Q2UY11 Gm28767-201ENSMUST00000188601 114 ntBASIC1.23□□□□□ -2.21
Col28a1Q2UY11 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.23□□□□□ -2.21
Col28a1Q2UY11 Gm44483-201ENSMUST00000197203 97 ntBASIC1.23□□□□□ -2.21
Col28a1Q2UY11 Gm20108-201ENSMUST00000219977 153 ntBASIC1.23□□□□□ -2.21
Col28a1Q2UY11 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm23170-201ENSMUST00000157158 106 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm23328-201ENSMUST00000157418 132 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm24401-201ENSMUST00000157868 91 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm22605-201ENSMUST00000158289 108 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm22944-201ENSMUST00000158662 133 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm22140-201ENSMUST00000158745 120 ntBASIC1.22□□□□□ -2.21
Col28a1Q2UY11 Gm24677-201ENSMUST00000158755 150 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms