Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm26290-201ENSMUST00000158891 145 ntBASIC2□□□□□ -2.09
Col6a1Q04857 Gm37778-201ENSMUST00000191732 190 ntBASIC2□□□□□ -2.09
Col6a1Q04857 Mir148b-201ENSMUST00000083626 97 ntBASIC2□□□□□ -2.09
Col6a1Q04857 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col6a1Q04857 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm25992-201ENSMUST00000102437 109 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm24902-201ENSMUST00000158126 123 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm24770-201ENSMUST00000158505 92 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm22403-201ENSMUST00000174919 84 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Mir3061-201ENSMUST00000175129 91 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm23813-201ENSMUST00000175153 77 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Mir3968-201ENSMUST00000175355 100 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Snora26-201ENSMUST00000175614 121 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm25730-201ENSMUST00000178753 165 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Mir7665-201ENSMUST00000184907 63 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.99□□□□□ -2.09
Col6a1Q04857 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a1Q04857 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col6a1Q04857 Scarna9-201ENSMUST00000104318 70 ntBASIC1.98□□□□□ -2.09
Col6a1Q04857 Gm22494-201ENSMUST00000104495 128 ntBASIC1.98□□□□□ -2.09
Col6a1Q04857 Gm28767-201ENSMUST00000188601 114 ntBASIC1.98□□□□□ -2.09
Col6a1Q04857 Gm25644-201ENSMUST00000083209 107 ntBASIC1.98□□□□□ -2.09
Col6a1Q04857 Mir223-201ENSMUST00000102112 110 ntBASIC1.97□□□□□ -2.09
Col6a1Q04857 Mir1191-201ENSMUST00000116883 120 ntBASIC1.97□□□□□ -2.09
Col6a1Q04857 Gm25014-201ENSMUST00000158401 103 ntBASIC1.97□□□□□ -2.09
Col6a1Q04857 Gm27415-201ENSMUST00000183720 95 ntBASIC1.97□□□□□ -2.09
Col6a1Q04857 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.97□□□□□ -2.09
Col6a1Q04857 Gm22067-201ENSMUST00000122790 107 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm26358-201ENSMUST00000158215 97 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm27517-201ENSMUST00000184347 236 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm25696-201ENSMUST00000082900 105 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm25629-201ENSMUST00000084001 107 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Mir532-201ENSMUST00000093630 96 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.96□□□□□ -2.1
Col6a1Q04857 Gm14923-201ENSMUST00000118270 155 ntBASIC1.95□□□□□ -2.1
Col6a1Q04857 Gm22205-201ENSMUST00000122655 71 ntBASIC1.95□□□□□ -2.1
Col6a1Q04857 Gm25831-201ENSMUST00000158924 163 ntBASIC1.95□□□□□ -2.1
Col6a1Q04857 Gm27975-201ENSMUST00000184400 101 ntBASIC1.95□□□□□ -2.1
Col6a1Q04857 Gm27419-201ENSMUST00000184576 109 ntBASIC1.95□□□□□ -2.1
Col6a1Q04857 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Col6a1Q04857 Gm23100-201ENSMUST00000083455 141 ntBASIC1.95□□□□□ -2.1
Col6a1Q04857 Mir3096-201ENSMUST00000116685 71 ntBASIC1.94□□□□□ -2.1
Col6a1Q04857 Gm26133-201ENSMUST00000157363 100 ntBASIC1.94□□□□□ -2.1
Col6a1Q04857 Gm23900-201ENSMUST00000157569 108 ntBASIC1.94□□□□□ -2.1
Col6a1Q04857 Gm24674-201ENSMUST00000179194 104 ntBASIC1.94□□□□□ -2.1
Col6a1Q04857 Gm25899-201ENSMUST00000082672 141 ntBASIC1.94□□□□□ -2.1
Col6a1Q04857 Gm25170-201ENSMUST00000104191 129 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Gm24984-201ENSMUST00000104454 133 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Gm23170-201ENSMUST00000157158 106 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Gm18433-201ENSMUST00000192747 197 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Gm25635-201ENSMUST00000082675 131 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Gm23056-201ENSMUST00000082803 111 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Mir5117-201ENSMUST00000083226 84 ntBASIC1.93□□□□□ -2.1
Col6a1Q04857 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Col6a1Q04857 Gm22082-201ENSMUST00000157587 161 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Gm25423-201ENSMUST00000157609 107 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Gm22802-201ENSMUST00000175621 89 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Gm27987-201ENSMUST00000184023 93 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Mir6240-201ENSMUST00000184281 117 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Gm28862-201ENSMUST00000188246 163 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Snord14a-201ENSMUST00000082807 87 ntBASIC1.92□□□□□ -2.1
Col6a1Q04857 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.91□□□□□ -2.1
Col6a1Q04857 Mir873a-201ENSMUST00000104863 77 ntBASIC1.91□□□□□ -2.1
Col6a1Q04857 Gm12432-201ENSMUST00000119540 186 ntBASIC1.91□□□□□ -2.1
Col6a1Q04857 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Col6a1Q04857 Gm24399-201ENSMUST00000157869 74 ntBASIC1.91□□□□□ -2.1
Col6a1Q04857 Gm22458-201ENSMUST00000082576 107 ntBASIC1.91□□□□□ -2.1
Col6a1Q04857 Gm24384-201ENSMUST00000122693 75 ntBASIC1.9□□□□□ -2.11
Col6a1Q04857 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.9□□□□□ -2.11
Col6a1Q04857 Gm24783-201ENSMUST00000157639 100 ntBASIC1.9□□□□□ -2.11
Col6a1Q04857 Gm23763-201ENSMUST00000158345 60 ntBASIC1.9□□□□□ -2.11
Col6a1Q04857 Gm24229-201ENSMUST00000158830 118 ntBASIC1.9□□□□□ -2.11
Col6a1Q04857 Gm23419-201ENSMUST00000175523 84 ntBASIC1.9□□□□□ -2.11
Col6a1Q04857 Gm25279-201ENSMUST00000122608 133 ntBASIC1.89□□□□□ -2.11
Col6a1Q04857 Gm22539-201ENSMUST00000158167 117 ntBASIC1.89□□□□□ -2.11
Col6a1Q04857 Mir7241-201ENSMUST00000184532 64 ntBASIC1.89□□□□□ -2.11
Col6a1Q04857 Gm23715-201ENSMUST00000157354 106 ntBASIC1.88□□□□□ -2.11
Col6a1Q04857 Gm22887-201ENSMUST00000178586 107 ntBASIC1.88□□□□□ -2.11
Col6a1Q04857 Gm45197-201ENSMUST00000205288 151 ntBASIC1.88□□□□□ -2.11
Col6a1Q04857 Gm24165-201ENSMUST00000082718 128 ntBASIC1.88□□□□□ -2.11
Col6a1Q04857 Gm25854-201ENSMUST00000082792 72 ntBASIC1.88□□□□□ -2.11
Col6a1Q04857 Mir200b-201ENSMUST00000083615 70 ntBASIC1.88□□□□□ -2.11
Col6a1Q04857 Gm22732-201ENSMUST00000158093 121 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm22944-201ENSMUST00000158662 133 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm23410-201ENSMUST00000179967 107 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Mir6995-201ENSMUST00000183658 71 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm45754-201ENSMUST00000212380 279 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm22505-201ENSMUST00000082956 108 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm22363-201ENSMUST00000083100 108 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm23814-201ENSMUST00000083230 102 ntBASIC1.87□□□□□ -2.11
Col6a1Q04857 Gm25542-201ENSMUST00000116889 94 ntBASIC1.86□□□□□ -2.11
Col6a1Q04857 Gm11694-201ENSMUST00000118637 159 ntBASIC1.86□□□□□ -2.11
Col6a1Q04857 Mir1899-201ENSMUST00000122798 96 ntBASIC1.86□□□□□ -2.11
Col6a1Q04857 Gm24222-201ENSMUST00000158834 93 ntBASIC1.86□□□□□ -2.11
Col6a1Q04857 Snord60-201ENSMUST00000082834 78 ntBASIC1.86□□□□□ -2.11
Col6a1Q04857 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a1Q04857 Gm23528-201ENSMUST00000104571 132 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 184 ms