Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.14□□□□□ -2.43
Nkx3-1P97436 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.14□□□□□ -2.43
Nkx3-1P97436 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.14□□□□□ -2.43
Nkx3-1P97436 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.14□□□□□ -2.43
Nkx3-1P97436 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.14□□□□□ -2.43
Nkx3-1P97436 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.15□□□□□ -2.43
Nkx3-1P97436 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.15□□□□□ -2.43
Nkx3-1P97436 Snord80-202ENSMUST00000199023 77 ntBASIC-0.15□□□□□ -2.43
Nkx3-1P97436 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.15□□□□□ -2.43
Nkx3-1P97436 Snord61-201ENSMUST00000083176 71 ntBASIC-0.15□□□□□ -2.43
Nkx3-1P97436 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.15□□□□□ -2.43
Nkx3-1P97436 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm22951-201ENSMUST00000179471 107 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.16□□□□□ -2.44
Nkx3-1P97436 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.17□□□□□ -2.44
Nkx3-1P97436 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.17□□□□□ -2.44
Nkx3-1P97436 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.17□□□□□ -2.44
Nkx3-1P97436 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.17□□□□□ -2.44
Nkx3-1P97436 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.17□□□□□ -2.44
Nkx3-1P97436 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 AC154390.1-201ENSMUST00000225629 277 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.18□□□□□ -2.44
Nkx3-1P97436 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm25141-201ENSMUST00000083177 107 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.19□□□□□ -2.44
Nkx3-1P97436 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Gm23209-201ENSMUST00000158667 110 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.2□□□□□ -2.44
Nkx3-1P97436 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Mir214-201ENSMUST00000083582 110 ntBASIC-0.21□□□□□ -2.44
Nkx3-1P97436 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.22□□□□□ -2.44
Nkx3-1P97436 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.23□□□□□ -2.45
Nkx3-1P97436 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.23□□□□□ -2.45
Nkx3-1P97436 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.23□□□□□ -2.45
Nkx3-1P97436 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.23□□□□□ -2.45
Nkx3-1P97436 Mir764-201ENSMUST00000103259 108 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Mir669g-201ENSMUST00000116809 123 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Mir466e-201ENSMUST00000198862 84 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.24□□□□□ -2.45
Nkx3-1P97436 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Gm25509-201ENSMUST00000116985 106 ntBASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
Nkx3-1P97436 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 222.8 ms